Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03459 Aquilegia oxysepala HOM05D005056 ORTHO05D006487 4.6e-89 331.3 173 100.0
Aqoxy5G00514 Aquilegia oxysepala HOM05D005056 ORTHO05D006487 2.0e-23 113.2 156 49.4
TAR636G2681 Trochodendron aralioides HOM05D005056 ORTHO05D006487 8.5e-19 97.8 182 40.7
Glyma.02G137100 Glycine max HOM05D005056 ORTHO05D006487 1.2e-17 94.0 158 42.4
Lsat_1_v5_gn_2_46281 Lactuca sativa HOM05D005056 ORTHO05D006487 6.1e-17 91.7 164 39.6
Dinv04468 Davidia involucrata HOM05D005056 ORTHO05D006487 1.5e-15 87.0 188 36.2
Glyma.07G208300 Glycine max HOM05D005056 ORTHO05D006487 2.6e-15 86.3 183 37.7
Cc03_g13950 Coffea canephora HOM05D005056 ORTHO05D006487 3.4e-15 85.9 173 37.6
Sabra13G0105300 Salix brachista HOM05D005056 ORTHO05D006487 2.2e-14 83.2 180 36.7
DCAR_019081 Daucus carota HOM05D005056 ORTHO05D006487 2.8e-14 82.8 187 33.7
Sabra13G0104700 Salix brachista HOM05D005056 ORTHO05D006487 3.7e-14 82.4 180 36.1
Sabra13G0105000 Salix brachista HOM05D005056 ORTHO05D006487 3.7e-14 82.4 180 36.1
Sabra13G0105200 Salix brachista HOM05D005056 ORTHO05D006487 3.7e-14 82.4 180 36.1
Phvul.003G296300 Phaseolus vulgaris HOM05D005056 ORTHO05D006487 6.3e-14 81.6 165 37.6
arahy.Tifrunner.gnm1.ann1.X1H480 Arachis hypogaea HOM05D005056 ORTHO05D006487 8.3e-14 81.3 170 37.1
SalBow1G2014 Salvia bowleyana HOM05D005056 ORTHO05D006487 3.1e-13 79.3 163 37.4
Migut.N03070 Erythranthe guttata HOM05D005056 ORTHO05D006487 4.1e-13 79.0 158 35.4
Eucgr.H00317 Eucalyptus grandis HOM05D005056 ORTHO05D006487 4.1e-13 79.0 169 36.7
RcHm_v2.0_Chr7g0219421 Rosa chinensis HOM05D005056 ORTHO05D006487 5.4e-13 78.6 182 34.1
Solyc11g072390.2 Solanum lycopersicum HOM05D005056 ORTHO05D006487 5.4e-13 78.6 161 38.5
VMungo0251G2998 Vigna mungo HOM05D005056 ORTHO05D006487 9.1e-13 77.8 158 38.0
CAN.G308.62 Capsicum annuum HOM05D005056 ORTHO05D006487 1.2e-12 77.4 147 42.2
GSVIVG01038137001 Vitis vinifera HOM05D005056 ORTHO05D006487 1.2e-12 77.4 186 31.7
QL93p1902_0036 Quercus lobata HOM05D005056 ORTHO05D006487 1.6e-12 77.0 183 33.3
arahy.Tifrunner.gnm1.ann1.K7ZH1T Arachis hypogaea HOM05D005056 ORTHO05D006487 2.0e-12 76.6 178 37.1
Lalb_Chr16g0384481 Lupinus albus HOM05D005056 ORTHO05D006487 2.0e-12 76.6 147 37.4
Sopen11g029990 Solanum pennellii HOM05D005056 ORTHO05D006487 2.0e-12 76.6 147 40.8
Sopen11g030040 Solanum pennellii HOM05D005056 ORTHO05D006487 2.7e-12 76.3 161 37.3
Prupe.1G206800 Prunus persica HOM05D005056 ORTHO05D006487 4.5e-12 75.5 193 32.1
Manes.16G069500 Manihot esculenta HOM05D005056 ORTHO05D006487 5.9e-12 75.1 169 36.1
Rhsim13G0194600 Rhododendron simsii HOM05D005056 ORTHO05D006656 7.7e-12 74.7 175 37.7
Peaxi162Scf00568g00417 Petunia axillaris HOM05D005056 ORTHO05D006487 1.3e-11 73.9 159 39.0
ECA238G2929 Erigeron canadensis HOM05D005056 ORTHO05D006487 1.7e-11 73.6 155 33.5
Cfa015266 Carpinus fangiana HOM05D005056 ORTHO05D006487 2.2e-11 73.2 181 34.3
Hma1.2p1_0150F.1_g066780 Hydrangea macrophylla HOM05D005056 ORTHO05D006487 3.8e-11 72.4 167 36.5
MD17G1177700 Malus domestica HOM05D005056 ORTHO05D006487 3.8e-11 72.4 188 33.5
HanXRQChr14g0439801 Helianthus annuus HOM05D005056 ORTHO05D006487 5.0e-11 72.0 138 37.0
SGA_v2.0_scaffold289G47281 Striga asiatica HOM05D005056 ORTHO05D006487 5.0e-11 72.0 161 37.3
Haze_01366 Corylus avellana HOM05D005056 ORTHO05D006487 6.5e-11 71.6 186 31.7
Nitab4.5_0002129g0080 Nicotiana tabacum HOM05D005056 ORTHO05D006487 6.5e-11 71.6 159 37.7
TWI38G0332 Tripterygium wilfordii HOM05D005056 ORTHO05D006487 6.5e-11 71.6 173 37.0
Solyc11g072320.3 Solanum lycopersicum HOM05D005056 ORTHO05D006487 8.5e-11 71.2 146 38.4
Atru.chr3.3232 Acer truncatum HOM05D005056 ORTHO05D006487 1.5e-10 70.5 182 31.9
Cpa.g.sc114.8 Carica papaya HOM05D005056 ORTHO05D006487 1.5e-10 70.5 172 35.5
Gorai.012G150100 Gossypium raimondii HOM05D005056 ORTHO05D006487 1.9e-10 70.1 170 36.5
Nitab4.5_0001802g0080 Nicotiana tabacum HOM05D005056 ORTHO05D006487 1.9e-10 70.1 158 38.6
FAN04G0894 Fragaria x ananassa HOM05D005056 ORTHO05D006487 2.5e-10 69.7 183 35.0
MBI18_g06087_MAGBIO Magnolia biondii HOM05D005056 ORTHO05D006487 4.2e-10 68.9 187 32.1
Os01g0104800 Oryza sativa ssp. japonica HOM05D005056 ORTHO05D006487 4.2e-10 68.9 184 33.7
TPR.G23553 Trifolium pratense HOM05D005056 ORTHO05D006487 4.2e-10 68.9 162 35.8
FAN08G2023 Fragaria x ananassa HOM05D005056 ORTHO05D006487 5.5e-10 68.6 187 32.6
PSO170G2549 Papaver somniferum HOM05D005056 ORTHO05D006487 5.5e-10 68.6 132 40.2
FvH4_5g27692 Fragaria vesca HOM05D005056 ORTHO05D006487 9.4e-10 67.8 183 34.4
FAN13G0846 Fragaria x ananassa HOM05D005056 ORTHO05D006487 2.1e-09 66.6 183 34.4
Lj7A489T32 Lonicera japonica HOM05D005056 ORTHO05D006487 2.1e-09 66.6 187 31.0
Psat7g121360 Pisum sativum HOM05D005056 ORTHO05D006487 2.1e-09 66.6 159 34.0
vmacro03868 Vaccinium macrocarpon HOM05D005056 ORTHO05D006487 2.1e-09 66.6 172 33.7
Potri.013G125800 Populus trichocarpa HOM05D005056 ORTHO05D006487 2.7e-09 66.2 185 33.0
Duzib128G0002 Durio zibethinus HOM05D005056 ORTHO05D006487 3.6e-09 65.9 155 36.1
FAN18G4484 Fragaria x ananassa HOM05D005056 ORTHO05D006487 3.6e-09 65.9 183 33.9
Gohir.D04G162100 Gossypium hirsutum HOM05D005056 ORTHO05D006487 3.6e-09 65.9 137 38.0
PSO302G0034 Papaver somniferum HOM05D005056 ORTHO05D006487 3.6e-09 65.9 128 38.3
Ciclev10019145m.g Citrus clementina HOM05D005056 ORTHO05D006487 6.1e-09 65.1 188 31.9
CANSAT56G3616 Cannabis sativa HOM05D005056 ORTHO05D006487 8.0e-09 64.7 207 28.5
COL.COLO4_09146 Corchorus olitorius HOM05D005056 ORTHO05D006487 8.0e-09 64.7 160 35.0
Hma1.2p1_0150F.1_g066790 Hydrangea macrophylla HOM05D005056 ORTHO05D006487 8.0e-09 64.7 139 37.4
CARHR138830 Cardamine hirsuta HOM05D005056 ORTHO05D006487 1.0e-08 64.3 158 33.5
AUR62016753 Chenopodium quinoa HOM05D005056 ORTHO05D006487 1.4e-08 63.9 167 33.5
CSS0004898 Camellia sinensis var. sinensis HOM05D005056 ORTHO05D006487 1.8e-08 63.5 177 29.4
CiPaw.02G100700 Carya illinoinensis HOM05D005056 ORTHO05D006487 1.8e-08 63.5 168 32.1
MELO3C022426.2 Cucumis melo HOM05D005056 ORTHO05D006487 1.8e-08 63.5 181 33.7
QL10p054991 Quercus lobata HOM05D005056 ORTHO05D006487 1.8e-08 63.5 183 30.1
EL10Ac9g21710 Beta vulgaris HOM05D005056 ORTHO05D006487 2.3e-08 63.2 168 32.1
CsaV3_6G007040 Cucumis sativus L. HOM05D005056 ORTHO05D006487 2.3e-08 63.2 175 34.9
Sp4g25750 Schrenkiella parvula HOM05D005056 ORTHO05D006487 2.3e-08 63.2 163 35.0
Hund06242 Selenicereus undatus HOM05D005056 ORTHO05D006487 2.3e-08 63.2 182 30.8
AUR62011304 Chenopodium quinoa HOM05D005056 ORTHO05D006487 3.0e-08 62.8 156 34.0
Aa31LG1G25370 Aethionema arabicum HOM05D005056 ORTHO05D006487 5.2e-08 62.0 164 31.1
CSS0024905 Camellia sinensis var. sinensis HOM05D005056 ORTHO05D006487 5.2e-08 62.0 177 28.8
Carub.0004s2618 Capsella rubella HOM05D005056 ORTHO05D006487 5.2e-08 62.0 163 32.5
Ca_18642_v3 Cicer arietinum L. HOM05D005056 ORTHO05D006487 6.8e-08 61.6 172 30.8
Medtr4g087270 Medicago truncatula HOM05D005056 ORTHO05D006487 6.8e-08 61.6 164 34.8
PGR142G4138 Punica granatum HOM05D005056 ORTHO05D006487 6.8e-08 61.6 201 29.4
THA.LOC104803998 Tarenaya hassleriana HOM05D005056 ORTHO05D006487 6.8e-08 61.6 122 38.5
Atru.chr4.1428 Acer truncatum HOM05D005056 ORTHO05D006487 8.8e-08 61.2 173 30.1
CDE04G2996 Ceratophyllum demersum HOM05D005056 ORTHO05D006487 8.8e-08 61.2 83 45.8
AUR62016951 Chenopodium quinoa HOM05D005056 ORTHO05D006487 8.8e-08 61.2 167 34.1
Gohir.A04G120600 Gossypium hirsutum HOM05D005056 ORTHO05D006487 8.8e-08 61.2 185 31.9
Sc08g0000580 Simmondsia chinensis HOM05D005056 ORTHO05D006487 8.8e-08 61.2 188 31.9
AL4G42470 Arabidopsis lyrata HOM05D005056 ORTHO05D006487 1.5e-07 60.5 169 33.1
Thecc.05G215400 Theobroma cacao HOM05D005056 ORTHO05D006487 1.5e-07 60.5 179 31.3
BcaC01g05222 Brassica carinata HOM05D005056 ORTHO05D006487 2.0e-07 60.1 122 37.7
A03p24390 Brassica napus HOM05D005056 ORTHO05D006487 2.0e-07 60.1 127 37.0
C03p29070 Brassica napus HOM05D005056 ORTHO05D006487 2.0e-07 60.1 122 37.7
BolC3t15261H Brassica oleracea HOM05D000026 ORTHO05D000094 2.0e-07 60.1 122 37.7
BraA03t11648Z Brassica rapa HOM05D005056 ORTHO05D006487 2.0e-07 60.1 127 37.0
Ah.01g019270 Amaranthus hybridus HOM05D005056 ORTHO05D006487 7.5e-07 58.2 160 33.8
Eucgr.H00313 Eucalyptus grandis HOM05D005056 ORTHO05D006487 7.5e-07 58.2 82 46.3
Oeu018048.1 Olea europaea HOM05D005056 ORTHO05D006487 7.5e-07 58.2 63 54.0
BcaB01g03369 Brassica carinata HOM05D005056 ORTHO05D006487 1.3e-06 57.4 182 33.0
Sed0010490 Sechium edule HOM05D005056 ORTHO05D006487 1.3e-06 57.4 164 34.1
ClCG06G001090 Citrullus lanatus HOM05D005056 ORTHO05D006487 1.7e-06 57.0 150 33.3
Zm00001eb034060 Zea mays HOM05D005056 ORTHO05D006487 2.2e-06 56.6 124 34.7
Lj1g0023120 Lotus japonicus HOM05D005056 ORTHO05D006487 2.8e-06 56.2 105 42.9
Thhalv10001371m.g Eutrema salsugineum HOM05D005056 ORTHO05D006487 6.3e-06 55.1 107 38.3


User provided reference genes

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