Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 2.2e-80 302.4 164 100.0
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 1.4e-39 166.8 166 59.6
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 7.0e-39 164.5 167 59.9
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 7.0e-39 164.5 167 59.9
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 1.6e-38 163.3 165 61.2
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 1.7e-37 159.8 166 59.6
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 2.3e-37 159.5 157 61.8
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 8.0e-35 151.0 157 59.9
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 1.1e-34 150.6 158 57.0
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 3.1e-34 149.1 159 58.5
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 6.8e-34 147.9 156 59.0
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 6.8e-34 147.9 141 59.6
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 1.3e-32 143.7 165 53.9
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 2.9e-32 142.5 168 54.8
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 3.7e-32 142.1 157 54.8
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 1.1e-31 140.6 158 56.3
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 1.9e-31 139.8 156 56.4
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 2.4e-31 139.4 166 54.8
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 4.1e-31 138.7 156 56.4
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 1.2e-30 137.1 146 59.6
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 2.1e-30 136.3 166 54.8
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 2.1e-30 136.3 155 54.8
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 1.3e-29 133.7 129 60.5
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 1.3e-29 133.7 156 55.8
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 3.0e-29 132.5 156 51.9
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 3.9e-29 132.1 164 49.4
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 6.6e-29 131.3 121 61.2
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 8.6e-29 131.0 151 54.3
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 1.1e-28 130.6 158 53.8
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 1.5e-28 130.2 140 57.1
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 3.3e-28 129.0 149 52.3
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 3.3e-28 129.0 166 51.8
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 4.3e-28 128.6 141 56.0
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 4.3e-28 128.6 160 54.4
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 5.6e-28 128.3 160 52.5
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 5.6e-28 128.3 159 52.2
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 5.6e-28 128.3 164 50.0
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 5.6e-28 128.3 130 57.7
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 7.3e-28 127.9 190 46.3
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 7.3e-28 127.9 151 53.6
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 9.5e-28 127.5 196 43.4
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 9.5e-28 127.5 148 55.4
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 9.5e-28 127.5 156 51.3
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 1.2e-27 127.1 126 57.9
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 1.6e-27 126.7 156 50.6
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 2.8e-27 125.9 156 50.0
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 2.8e-27 125.9 156 50.6
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 6.2e-27 124.8 156 49.4
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 6.2e-27 124.8 156 50.0
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 8.1e-27 124.4 143 51.0
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 8.1e-27 124.4 135 58.5
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 1.1e-26 124.0 155 51.0
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 2.3e-26 122.9 156 48.7
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 2.3e-26 122.9 156 48.7
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.3e-26 122.9 162 50.6
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 2.3e-26 122.9 154 50.0
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 3.1e-26 122.5 156 48.7
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 3.1e-26 122.5 150 52.0
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 6.8e-26 121.3 163 49.7
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 6.8e-26 121.3 157 50.3
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 8.9e-26 120.9 156 48.1
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 8.9e-26 120.9 163 49.7
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 2.0e-25 119.8 163 49.7
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 2.6e-25 119.4 156 47.4
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 2.6e-25 119.4 137 56.2
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 2.6e-25 119.4 131 55.7
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 4.4e-25 118.6 166 48.8
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 5.8e-25 118.2 157 49.0
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 1.3e-24 117.1 165 47.9
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 1.7e-24 116.7 154 51.3
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 2.2e-24 116.3 151 50.3
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 2.2e-24 116.3 156 50.6
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 2.9e-24 115.9 122 55.7
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 2.9e-24 115.9 158 45.6
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 8.3e-24 114.4 134 53.7
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 8.3e-24 114.4 156 48.7
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 8.3e-24 114.4 151 53.0
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 1.1e-23 114.0 150 46.7
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 1.9e-23 113.2 117 59.0
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 3.2e-23 112.5 136 52.9
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 4.1e-23 112.1 133 50.4
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 4.1e-23 112.1 156 49.4
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 5.4e-23 111.7 122 54.1
Nn2g12688 Nelumbo nucifera HOM05D005827 ORTHO05D005864 1.2e-22 110.5 97 68.0
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 1.6e-22 110.2 128 53.1
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 4.6e-22 108.6 130 53.1
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 4.6e-22 108.6 156 47.4
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 7.8e-22 107.8 155 45.8
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 1.3e-21 107.1 121 52.9
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 1.3e-21 107.1 156 48.1
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 1.1e-20 104.0 100 60.0
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 1.5e-20 103.6 101 59.4
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 1.5e-20 103.6 152 48.0
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 1.9e-20 103.2 178 46.1
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 2.5e-20 102.8 127 48.8
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 3.3e-20 102.4 180 41.1
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 1.6e-19 100.1 166 42.8
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 4.7e-19 98.6 175 44.6
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 6.2e-19 98.2 107 53.3
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 2.0e-17 93.2 108 52.8
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 5.8e-17 91.7 156 42.3
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 9.9e-17 90.9 97 55.7
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 2.2e-16 89.7 139 43.9
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 3.8e-16 89.0 113 51.3
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 1.1e-15 87.4 118 51.7
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 1.4e-15 87.0 171 39.2
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 1.4e-15 87.0 155 40.0
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 1.4e-15 87.0 155 40.0
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 4.2e-15 85.5 92 54.3
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 1.6e-14 83.6 99 51.5
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 1.0e-13 80.9 85 57.6
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 1.7e-13 80.1 88 52.3
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 3.9e-13 79.0 91 50.5
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 1.1e-12 77.4 119 47.1
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 1.5e-12 77.0 123 39.0
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 1.9e-12 76.6 106 46.2
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 4.3e-12 75.5 130 44.6
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 1.2e-11 73.9 77 54.5
Zm00001eb091410 Zea mays HOM05D005827 ORTHO05D005864 1.2e-11 73.9 118 45.8
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 1.6e-11 73.6 75 56.0
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 1.6e-11 73.6 127 41.7
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 2.1e-11 73.2 80 51.2
Zm00001eb324920 Zea mays HOM05D005827 ORTHO05D005864 2.1e-11 73.2 119 46.2
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 4.7e-11 72.0 127 41.7
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 1.1e-10 70.9 149 43.6
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 3.8e-08 62.4 57 59.6
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 3.8e-08 62.4 96 44.8
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 1.9e-07 60.1 144 36.1
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 3.5e-06 55.8 92 42.4


User provided reference genes

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