Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 2.8e-260 901.4 443 100.0
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.2e-138 497.3 430 61.4
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 6.8e-137 491.5 430 60.5
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 7.3e-123 444.9 427 55.0
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 9.5e-123 444.5 478 53.3
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 1.2e-122 444.1 428 55.8
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 1.3e-119 434.1 426 54.2
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 1.9e-118 430.3 402 56.7
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 1.7e-116 423.7 432 53.7
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 3.0e-116 422.9 444 50.7
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 3.0e-116 422.9 447 53.5
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 5.6e-115 418.7 422 51.9
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 4.7e-114 415.6 447 52.3
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 3.1e-113 412.9 438 51.4
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 2.6e-112 409.8 457 50.1
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 4.4e-112 409.1 439 52.4
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 2.9e-111 406.4 456 50.4
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 6.4e-111 405.2 481 47.8
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 1.9e-110 403.7 436 49.5
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 2.4e-110 403.3 436 51.4
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 3.9e-108 396.0 468 46.8
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 3.3e-107 392.9 427 49.6
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 2.1e-106 390.2 420 50.7
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 1.1e-105 387.9 428 51.6
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 1.4e-105 387.5 435 49.0
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 1.8e-105 387.1 443 49.9
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 3.1e-105 386.3 424 50.2
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 1.2e-104 384.4 447 49.0
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 1.5e-104 384.0 446 48.7
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 2.0e-104 383.6 443 48.1
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 2.6e-104 383.3 441 48.8
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 3.4e-104 382.9 437 50.3
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 4.4e-104 382.5 442 50.2
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 5.8e-104 382.1 425 49.9
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 7.6e-104 381.7 438 49.3
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.3e-103 380.9 438 50.2
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.3e-103 380.9 438 50.0
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 1.3e-103 380.9 441 50.8
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 1.7e-103 380.6 431 46.6
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 2.2e-103 380.2 419 50.1
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 2.2e-103 380.2 419 50.1
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.1e-102 377.9 430 50.0
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 1.4e-102 377.5 425 48.9
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 1.9e-102 377.1 431 46.4
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 5.4e-102 375.6 414 48.3
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 3.0e-100 369.8 429 47.1
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 3.9e-100 369.4 426 47.7
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 3.9e-100 369.4 433 47.8
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 1.1e-99 367.9 439 46.7
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 5.6e-99 365.5 417 45.8
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 1.3e-98 364.4 454 46.9
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 8.1e-98 361.7 439 46.2
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 8.1e-98 361.7 456 46.9
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 3.1e-97 359.8 409 49.4
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 3.1e-97 359.8 449 45.4
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 9.0e-97 358.2 427 45.2
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 3.4e-96 356.3 453 44.2
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 5.8e-96 355.5 432 47.9
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 8.4e-95 351.7 441 45.1
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 1.6e-93 347.4 436 46.1
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 1.6e-93 347.4 442 45.5
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 2.1e-93 347.1 431 45.0
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 4.3e-91 339.3 433 46.9
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 7.3e-91 338.6 438 45.2
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 2.8e-90 336.7 437 45.5
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 1.4e-89 334.3 410 46.8
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 1.4e-89 334.3 404 48.5
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 2.4e-89 333.6 439 44.6
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 4.5e-88 329.3 428 43.0
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 1.0e-84 318.2 420 45.0
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 1.3e-84 317.8 447 42.7
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 3.0e-84 316.6 435 43.7
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 1.1e-83 314.7 427 42.9
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 4.8e-82 309.3 528 37.3
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 6.2e-82 308.9 459 42.7
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 1.0e-79 301.6 411 41.6
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 1.7e-79 300.8 416 42.5
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 4.2e-78 296.2 456 40.8
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 9.3e-78 295.0 454 41.6
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 2.7e-77 293.5 456 40.6
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 3.0e-76 290.0 456 41.0
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 4.8e-74 282.7 453 40.4
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 2.5e-70 270.4 278 50.0
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 6.1e-69 265.8 441 39.5
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 5.1e-68 262.7 426 38.5
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 6.7e-68 262.3 215 59.5
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 4.3e-67 259.6 225 57.3
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 5.3e-65 252.7 439 34.9
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 1.5e-64 251.1 434 39.2
RcHm_v2.0_Chr7g0190091 Rosa chinensis HOM05D005804 ORTHO05D006849 5.5e-62 242.7 209 59.8
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 2.7e-61 240.4 322 42.9
Manes.14G051101 Manihot esculenta HOM05D005804 ORTHO05D006849 3.6e-61 240.0 247 51.4
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 4.3e-59 233.0 322 43.8
Gohir.A07G051132 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.0e-52 211.8 155 63.2
Gohir.D07G055532 Gossypium hirsutum HOM05D005804 ORTHO05D006849 4.8e-50 203.0 165 58.8
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 1.8e-49 201.1 319 41.1
Carub.0007s1617 Capsella rubella HOM05D005804 ORTHO05D006849 1.5e-46 191.4 171 53.8
Phvul.009G166301 Phaseolus vulgaris HOM05D005804 ORTHO05D006849 9.4e-46 188.7 146 61.0
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 2.1e-45 187.6 299 41.8
Os09g0506900 Oryza sativa ssp. japonica HOM05D005804 ORTHO05D006849 6.7e-44 182.6 275 38.5
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 8.8e-44 182.2 174 57.5
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 8.8e-44 182.2 479 30.5
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 2.6e-43 180.6 433 31.4
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 2.6e-43 180.6 150 62.7
Lalb_Chr08g0237181 Lupinus albus HOM05D005804 ORTHO05D006849 5.7e-43 179.5 125 66.4
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 1.3e-42 178.3 297 38.4
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 1.3e-42 178.3 312 38.5
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.7e-42 177.9 153 59.5
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 2.2e-42 177.6 153 59.5
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 6.3e-42 176.0 152 59.9
AUR62034829 Chenopodium quinoa HOM05D005804 ORTHO05D006849 7.0e-41 172.6 232 40.9
AUR62034830 Chenopodium quinoa HOM05D005804 ORTHO05D006849 7.0e-41 172.6 232 40.9
ATR0178G019 Amborella trichopoda HOM05D005804 ORTHO05D006849 9.1e-41 172.2 125 62.4
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 5.0e-39 166.4 189 50.8
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 2.5e-38 164.1 153 55.6
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 7.2e-38 162.5 436 30.3
SGA_v2.0_scaffold110G31174 Striga asiatica HOM05D052586 ORTHO05D006849 2.0e-35 154.5 118 55.9
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 3.7e-34 150.2 144 54.2
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 4.8e-34 149.8 155 49.7
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 3.1e-33 147.1 141 56.7
SEGI_07598 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 7.0e-33 146.0 141 45.4
vmacro16719 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 4.2e-30 136.7 177 42.4
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 1.2e-29 135.2 341 30.8
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 1.5e-27 128.3 140 51.4
Oeu016044.4 Olea europaea HOM05D005804 ORTHO05D006849 2.4e-25 120.9 125 46.4
Mapoly0096s0044 Marchantia polymorpha HOM05D005804 ORTHO05D006849 3.3e-22 110.5 129 38.0
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 4.0e-20 103.6 114 51.8
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 8.9e-20 102.4 139 48.2
SalBow2G1912 Salvia bowleyana HOM05D000011 ORTHO05D000018 6.4e-18 96.3 87 56.3
Potri.015G096700 Populus trichocarpa HOM05D005804 ORTHO05D006849 1.3e-15 88.6 140 39.3
CSS0025658 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 8.6e-15 85.9 130 42.3
CBR_g12751 Chara braunii HOM05D005804 ORTHO05D006849 9.5e-14 82.4 166 35.5
CiPaw.12G043400 Carya illinoinensis HOM05D005804 ORTHO05D006849 2.8e-13 80.9 72 65.3
Actinidia36808 Actinidia chinensis HOM05D005804 ORTHO05D006849 3.7e-10 70.5 48 66.7
Sabra15G0117400 Salix brachista HOM05D005804 ORTHO05D006849 5.0e-07 60.1 108 38.0


User provided reference genes

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