Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03322 Aquilegia oxysepala HOM05D003418 ORTHO05D004105 1.6e-69 266.2 150 100.0
TAR629G2062 Trochodendron aralioides HOM05D003418 ORTHO05D004105 8.7e-20 100.9 120 51.7
TAR374G1678 Trochodendron aralioides HOM05D003418 ORTHO05D004105 2.5e-19 99.4 118 50.0
Nn3g16424 Nelumbo nucifera HOM05D003418 ORTHO05D004105 5.3e-17 91.7 101 55.4
MBI07_g11273_MAGBIO Magnolia biondii HOM05D003418 ORTHO05D004105 6.9e-17 91.3 120 47.5
Ca_16446_v3 Cicer arietinum L. HOM05D003418 ORTHO05D004105 2.6e-16 89.4 103 50.5
DCAR_024672 Daucus carota HOM05D003418 ORTHO05D004105 2.6e-16 89.4 115 49.6
Aa31LG7G9910 Aethionema arabicum HOM05D003418 ORTHO05D004105 3.4e-16 89.0 120 47.5
Dinv11681 Davidia involucrata HOM05D003418 ORTHO05D004105 3.4e-16 89.0 122 48.4
TWI36G1005 Tripterygium wilfordii HOM05D003418 ORTHO05D004105 5.9e-16 88.2 118 48.3
AL1G40690 Arabidopsis lyrata HOM05D003418 ORTHO05D004105 7.6e-16 87.8 124 49.2
Cpa.g.sc43.80 Carica papaya HOM05D003418 ORTHO05D004105 7.6e-16 87.8 106 50.9
Lsat_1_v5_gn_3_30720 Lactuca sativa HOM05D000660 ORTHO05D000766 7.6e-16 87.8 112 48.2
Lsat_1_v5_gn_4_781 Lactuca sativa HOM05D003418 ORTHO05D004105 1.0e-15 87.4 111 49.5
CSS0043963 Camellia sinensis var. sinensis HOM05D003418 ORTHO05D004105 1.7e-15 86.7 114 49.1
PSO478G5262 Papaver somniferum HOM05D003418 ORTHO05D004105 1.7e-15 86.7 107 51.4
Prupe.1G223700 Prunus persica HOM05D003418 ORTHO05D004105 1.7e-15 86.7 121 49.6
Manes.12G009300 Manihot esculenta HOM05D003418 ORTHO05D004105 2.2e-15 86.3 107 52.3
Dinv17578 Davidia involucrata HOM05D003418 ORTHO05D004105 2.9e-15 85.9 122 47.5
Rhsim08G0042100 Rhododendron simsii HOM05D003418 ORTHO05D004105 2.9e-15 85.9 133 43.6
THA.LOC104825492 Tarenaya hassleriana HOM05D003418 ORTHO05D004105 3.8e-15 85.5 122 49.2
BcaB03g14004 Brassica carinata HOM05D003418 ORTHO05D004105 5.0e-15 85.1 128 46.1
AUR62017773 Chenopodium quinoa HOM05D003418 ORTHO05D004105 5.0e-15 85.1 121 46.3
Cc11_g17090 Coffea canephora HOM05D003418 ORTHO05D004105 5.0e-15 85.1 123 48.0
Hma1.2p1_0275F.1_g110610 Hydrangea macrophylla HOM05D003418 ORTHO05D004105 5.0e-15 85.1 115 48.7
EL10Ac6g13525 Beta vulgaris HOM05D003418 ORTHO05D004105 6.5e-15 84.7 106 50.9
Lj6g0011251 Lotus japonicus HOM05D003418 ORTHO05D004105 6.5e-15 84.7 118 46.6
Manes.13G009900 Manihot esculenta HOM05D003418 ORTHO05D004105 6.5e-15 84.7 119 47.1
Nn4g22281 Nelumbo nucifera HOM05D003418 ORTHO05D004105 6.5e-15 84.7 123 43.1
Ciclev10032970m.g Citrus clementina HOM05D003418 ORTHO05D004105 8.5e-15 84.3 110 47.3
Duzib248G1492 Durio zibethinus HOM05D003418 ORTHO05D004105 8.5e-15 84.3 112 47.3
TWI18G0155 Tripterygium wilfordii HOM05D003418 ORTHO05D004105 8.5e-15 84.3 122 47.5
HanXRQChr05g0128721 Helianthus annuus HOM05D003418 ORTHO05D004105 1.1e-14 84.0 106 47.2
PSO017G5305 Papaver somniferum HOM05D003418 ORTHO05D004105 1.1e-14 84.0 107 50.5
AT1G27290 Arabidopsis thaliana HOM05D003418 ORTHO05D004105 1.4e-14 83.6 122 45.9
Haze_12439 Corylus avellana HOM05D003418 ORTHO05D004105 1.4e-14 83.6 109 52.3
MBI11_g22683_MAGBIO Magnolia biondii HOM05D003418 ORTHO05D004105 1.4e-14 83.6 98 54.1
Gohir.D12G153300 Gossypium hirsutum HOM05D003418 ORTHO05D004105 1.9e-14 83.2 112 48.2
unitig_22.g6403 Utricularia gibba HOM05D003418 ORTHO05D003127 1.9e-14 83.2 112 48.2
CiPaw.05G107800 Carya illinoinensis HOM05D003418 ORTHO05D004105 2.5e-14 82.8 108 49.1
Duzib268G0386 Durio zibethinus HOM05D003418 ORTHO05D004105 2.5e-14 82.8 116 46.6
FAN17G2596 Fragaria x ananassa HOM05D003418 ORTHO05D004105 2.5e-14 82.8 117 45.3
Glyma.18G004900 Glycine max HOM05D003418 ORTHO05D004105 2.5e-14 82.8 109 48.6
Gohir.A12G149400 Gossypium hirsutum HOM05D003418 ORTHO05D004105 2.5e-14 82.8 112 48.2
Hma1.2p1_0065F.1_g035230 Hydrangea macrophylla HOM05D003418 ORTHO05D004105 2.5e-14 82.8 118 45.8
Potri.001G058100 Populus trichocarpa HOM05D003418 ORTHO05D004105 2.5e-14 82.8 111 47.7
A07p11990 Brassica napus HOM05D003418 ORTHO05D004105 3.2e-14 82.4 127 44.9
MD13G1121400 Malus domestica HOM05D003418 ORTHO05D004105 3.2e-14 82.4 119 43.7
Phvul.001G263300 Phaseolus vulgaris HOM05D003418 ORTHO05D004105 3.2e-14 82.4 109 46.8
unitig_8.g3133 Utricularia gibba HOM05D003418 ORTHO05D004105 3.2e-14 82.4 124 43.5
CiPaw.06G104400 Carya illinoinensis HOM05D003418 ORTHO05D004105 4.2e-14 82.0 110 49.1
FAN12G4113 Fragaria x ananassa HOM05D003418 ORTHO05D004105 4.2e-14 82.0 119 44.5
Gorai.008G165800 Gossypium raimondii HOM05D003418 ORTHO05D004105 4.2e-14 82.0 112 48.2
MSTRG.492 Avicennia marina HOM05D003418 ORTHO05D004105 5.5e-14 81.6 117 47.0
CANSAT01G2188 Cannabis sativa HOM05D003418 ORTHO05D004105 5.5e-14 81.6 106 50.0
Carub.0001s2582 Capsella rubella HOM05D003418 ORTHO05D004105 5.5e-14 81.6 123 45.5
Nitab4.5_0000067g0190 Nicotiana tabacum HOM05D003418 ORTHO05D004105 5.5e-14 81.6 107 48.6
C07p17920 Brassica napus HOM05D003418 ORTHO05D004105 7.2e-14 81.3 127 44.9
Duzib251G0418 Durio zibethinus HOM05D003418 ORTHO05D004105 7.2e-14 81.3 106 49.1
FvH4_4g23540 Fragaria vesca HOM05D003418 ORTHO05D004105 7.2e-14 81.3 122 41.0
THA.LOC104807496 Tarenaya hassleriana HOM05D003418 ORTHO05D004105 7.2e-14 81.3 123 45.5
BraA07t28984Z Brassica rapa HOM05D003418 ORTHO05D004105 9.3e-14 80.9 127 44.9
Phvul.L003346 Phaseolus vulgaris HOM05D003418 ORTHO05D004105 9.3e-14 80.9 106 48.1
THA.LOC104807144 Tarenaya hassleriana HOM05D003418 ORTHO05D004105 9.3e-14 80.9 118 42.4
THA.LOC104809188 Tarenaya hassleriana HOM05D003418 ORTHO05D004105 9.3e-14 80.9 118 42.4
THA.LOC104822793 Tarenaya hassleriana HOM05D003418 ORTHO05D004105 9.3e-14 80.9 118 42.4
FAN07G2322 Fragaria x ananassa HOM05D003418 ORTHO05D004105 1.2e-13 80.5 128 42.2
HanXRQChr06g0174711 Helianthus annuus HOM05D003418 ORTHO05D004105 1.2e-13 80.5 115 47.8
SalBow8G1362 Salvia bowleyana HOM05D003418 ORTHO05D004105 1.2e-13 80.5 99 50.5
MELO3C017764.2 Cucumis melo HOM05D003418 ORTHO05D004105 1.6e-13 80.1 121 47.1
Glyma.05G148600 Glycine max HOM05D003418 ORTHO05D004105 1.6e-13 80.1 105 48.6
Aqoxy3G01580 Aquilegia oxysepala HOM05D003418 ORTHO05D004105 2.1e-13 79.7 142 41.5
MELO3C022314.2 Cucumis melo HOM05D003418 ORTHO05D004105 2.1e-13 79.7 105 43.8
Medtr3g084990 Medicago truncatula HOM05D003418 ORTHO05D004105 2.1e-13 79.7 99 45.5
Oeu056671.1 Olea europaea HOM05D003418 ORTHO05D004105 2.1e-13 79.7 114 47.4
PGR119G0689 Punica granatum HOM05D003418 ORTHO05D004105 2.1e-13 79.7 115 43.5
Sabra01G0041900 Salix brachista HOM05D003418 ORTHO05D004105 2.1e-13 79.7 110 44.5
Sed0009671 Sechium edule HOM05D003418 ORTHO05D004105 2.1e-13 79.7 118 40.7
Hund25475 Selenicereus undatus HOM05D003418 ORTHO05D004105 2.1e-13 79.7 109 46.8
BcaC05g26544 Brassica carinata HOM05D003418 ORTHO05D004105 2.7e-13 79.3 90 48.9
C03p73650 Brassica napus HOM05D003418 ORTHO05D004105 2.7e-13 79.3 93 50.5
C05p25990 Brassica napus HOM05D003418 ORTHO05D004105 2.7e-13 79.3 90 48.9
Thhalv10009048m.g Eutrema salsugineum HOM05D003418 ORTHO05D004105 2.7e-13 79.3 122 45.9
SGA_v2.0_scaffold87G27173 Striga asiatica HOM05D003418 ORTHO05D004105 2.7e-13 79.3 113 45.1
TPR.G17778 Trifolium pratense HOM05D003418 ORTHO05D004105 2.7e-13 79.3 107 47.7
Ca_18018_v3 Cicer arietinum L. HOM05D003418 ORTHO05D004105 3.6e-13 79.0 106 45.3
Oeu004464.1 Olea europaea HOM05D003418 ORTHO05D004105 3.6e-13 79.0 107 49.5
PSO017G5034 Papaver somniferum HOM05D003418 ORTHO05D004105 3.6e-13 79.0 124 42.7
Actinidia08059 Actinidia chinensis HOM05D003418 ORTHO05D004105 4.6e-13 78.6 121 46.3
MSTRG.8015 Avicennia marina HOM05D003418 ORTHO05D004105 4.6e-13 78.6 104 49.0
CARHR026860 Cardamine hirsuta HOM05D003418 ORTHO05D004105 4.6e-13 78.6 111 44.1
Psat5g098080 Pisum sativum HOM05D003418 ORTHO05D004105 4.6e-13 78.6 86 50.0
SalBow2G0507 Salvia bowleyana HOM05D003418 ORTHO05D004105 4.6e-13 78.6 110 49.1
PGSC0003DMG400013209 Solanum tuberosum HOM05D003418 ORTHO05D004105 4.6e-13 78.6 124 42.7
VMungo0251G0083 Vigna mungo HOM05D003418 ORTHO05D004105 4.6e-13 78.6 105 47.6
arahy.Tifrunner.gnm1.ann1.R9UC9A Arachis hypogaea HOM05D003418 ORTHO05D004105 6.1e-13 78.2 114 44.7
arahy.Tifrunner.gnm1.ann1.V484X6 Arachis hypogaea HOM05D003418 ORTHO05D004105 6.1e-13 78.2 114 44.7
CAN.G7.14 Capsicum annuum HOM05D003418 ORTHO05D004105 6.1e-13 78.2 108 44.4
QL03p052131 Quercus lobata HOM05D003418 ORTHO05D004105 6.1e-13 78.2 140 37.9
Rhsim12G0093300 Rhododendron simsii HOM05D003418 ORTHO05D004105 6.1e-13 78.2 109 48.6
ClCG07G015190 Citrullus lanatus HOM05D003418 ORTHO05D004105 7.9e-13 77.8 101 51.5
CsaV3_4G002780 Cucumis sativus L. HOM05D003418 ORTHO05D004105 7.9e-13 77.8 104 51.0
Gohir.A03G125000 Gossypium hirsutum HOM05D003418 ORTHO05D004105 7.9e-13 77.8 103 45.6
Lj4g0014081 Lotus japonicus HOM05D003418 ORTHO05D004105 7.9e-13 77.8 109 45.0
MD16G1121700 Malus domestica HOM05D003418 ORTHO05D004105 7.9e-13 77.8 122 43.4
Oeu049146.3 Olea europaea HOM05D003418 ORTHO05D004105 7.9e-13 77.8 114 46.5
PSO478G1430 Papaver somniferum HOM05D003418 ORTHO05D004105 7.9e-13 77.8 124 42.7
Sc11g0000380 Simmondsia chinensis HOM05D003418 ORTHO05D004105 7.9e-13 77.8 113 46.0
Solyc05g015710.3 Solanum lycopersicum HOM05D003418 ORTHO05D004105 7.9e-13 77.8 110 44.5
SGA_v2.0_scaffold391G50621 Striga asiatica HOM05D003418 ORTHO05D004105 7.9e-13 77.8 107 47.7
A08p26430 Brassica napus HOM05D003418 ORTHO05D004105 1.0e-12 77.4 93 50.5
BolC3t19656H Brassica oleracea HOM05D003418 ORTHO05D004105 1.0e-12 77.4 93 50.5
BolC7t42298H Brassica oleracea HOM05D003418 ORTHO05D004105 1.0e-12 77.4 119 42.9
Glyma.11G252200 Glycine max HOM05D003418 ORTHO05D004105 1.4e-12 77.0 113 46.0
Gorai.005G165100 Gossypium raimondii HOM05D003418 ORTHO05D004105 1.4e-12 77.0 103 47.6
Nitab4.5_0005872g0010 Nicotiana tabacum HOM05D003418 ORTHO05D004105 1.4e-12 77.0 103 43.7
Ciclev10017602m.g Citrus clementina HOM05D003418 ORTHO05D004105 1.8e-12 76.6 104 43.3
CsaV3_6G008230 Cucumis sativus L. HOM05D003418 ORTHO05D004105 1.8e-12 76.6 105 43.8
Medtr8g097040 Medicago truncatula HOM05D003418 ORTHO05D004105 1.8e-12 76.6 114 45.6
Potri.003G170300 Populus trichocarpa HOM05D003418 ORTHO05D004105 1.8e-12 76.6 100 48.0
RcHm_v2.0_Chr4g0429941 Rosa chinensis HOM05D003418 ORTHO05D004105 1.8e-12 76.6 123 41.5
Sopen05g011160 Solanum pennellii HOM05D003418 ORTHO05D004105 1.8e-12 76.6 110 43.6
TPR.G17100 Trifolium pratense HOM05D003418 ORTHO05D004105 1.8e-12 76.6 118 42.4
Actinidia09637 Actinidia chinensis HOM05D003418 ORTHO05D004105 2.3e-12 76.3 109 45.0
BraA08t34595Z Brassica rapa HOM05D003418 ORTHO05D004105 2.3e-12 76.3 93 49.5
CDE06G2031 Ceratophyllum demersum HOM05D003325 ORTHO05D003852 2.3e-12 76.3 71 59.2
Sed0026789 Sechium edule HOM05D003418 ORTHO05D004105 2.3e-12 76.3 106 44.3
Atru.chr11.2346 Acer truncatum HOM05D003418 ORTHO05D004105 3.0e-12 75.9 131 43.5
Migut.K00956 Erythranthe guttata HOM05D003418 ORTHO05D004105 3.0e-12 75.9 108 46.3
Lalb_Chr23g0278191 Lupinus albus HOM05D003418 ORTHO05D004105 3.0e-12 75.9 95 48.4
Ah.03g136010 Amaranthus hybridus HOM05D003418 ORTHO05D004105 3.9e-12 75.5 90 52.2
BcaB03g12071 Brassica carinata HOM05D003418 ORTHO05D004105 3.9e-12 75.5 124 42.7
Sed0008687 Sechium edule HOM05D003418 ORTHO05D004105 5.1e-12 75.1 103 48.5
Nitab4.5_0000340g0030 Nicotiana tabacum HOM05D003418 ORTHO05D004105 8.8e-12 74.3 101 42.6
Actinidia04435 Actinidia chinensis HOM05D003418 ORTHO05D004105 1.5e-11 73.6 104 45.2
PGR102G1973 Punica granatum HOM05D003418 ORTHO05D004105 1.9e-11 73.2 104 47.1
Gohir.D02G147400 Gossypium hirsutum HOM05D003418 ORTHO05D004105 2.5e-11 72.8 106 42.5
PGSC0003DMG401021901 Solanum tuberosum HOM05D003418 ORTHO05D004105 2.5e-11 72.8 106 43.4
Gorai.002G181900 Gossypium raimondii HOM05D003418 ORTHO05D004105 4.3e-11 72.0 95 45.3
Nitab4.5_0012747g0020 Nicotiana tabacum HOM05D003418 ORTHO05D004105 4.3e-11 72.0 86 47.7
CiPaw.03G057000 Carya illinoinensis HOM05D003418 ORTHO05D004105 5.7e-11 71.6 103 45.6
Haze_14888 Corylus avellana HOM05D003418 ORTHO05D004105 7.4e-11 71.2 104 46.2
ATR0561G224 Amborella trichopoda HOM05D003418 ORTHO05D004105 9.7e-11 70.9 106 45.3
Gohir.A01G154140 Gossypium hirsutum HOM05D003418 ORTHO05D004105 9.7e-11 70.9 95 44.2
Gorai.009G332100 Gossypium raimondii HOM05D003418 ORTHO05D004105 9.7e-11 70.9 110 44.5
Psat7g077520 Pisum sativum HOM05D003418 ORTHO05D004105 9.7e-11 70.9 113 38.9
EL10Ac6g15425 Beta vulgaris HOM05D000704 ORTHO05D000526 1.3e-10 70.5 124 39.5
Cfa007215 Carpinus fangiana HOM05D003418 ORTHO05D004105 1.7e-10 70.1 107 45.8
Eucgr.H04620 Eucalyptus grandis HOM05D003418 ORTHO05D004105 1.7e-10 70.1 61 62.3
CDE02G2290 Ceratophyllum demersum HOM05D003418 ORTHO05D004105 2.2e-10 69.7 54 66.7
Gohir.A05G310300 Gossypium hirsutum HOM05D003418 ORTHO05D004105 2.2e-10 69.7 98 45.9
Gohir.D05G311100 Gossypium hirsutum HOM05D003418 ORTHO05D004105 2.2e-10 69.7 98 45.9
CSS0019501 Camellia sinensis var. sinensis HOM05D003418 ORTHO05D004105 2.8e-10 69.3 108 48.1
Gohir.D01G146200 Gossypium hirsutum HOM05D003418 ORTHO05D004105 3.7e-10 68.9 95 44.2
Thecc.02G204700 Theobroma cacao HOM05D003418 ORTHO05D004105 3.7e-10 68.9 115 42.6
Peaxi162Scf00518g00025 Petunia axillaris HOM05D003418 ORTHO05D004105 4.8e-10 68.6 119 42.0
Sopen04g016940 Solanum pennellii HOM05D003418 ORTHO05D004105 6.3e-10 68.2 78 51.3
Migut.E00007 Erythranthe guttata HOM05D003418 ORTHO05D004105 8.2e-10 67.8 125 36.0
unitig_26.g10403 Utricularia gibba HOM05D003418 ORTHO05D004105 1.4e-09 67.0 91 50.5
HPP92_025259 Vanilla planifolia HOM05D003418 ORTHO05D004105 1.4e-09 67.0 120 42.5
Lalb_Chr07g0187041 Lupinus albus HOM05D003418 ORTHO05D004105 3.1e-09 65.9 86 45.3
Lalb_Chr12g0206031 Lupinus albus HOM05D003418 ORTHO05D004105 9.1e-09 64.3 90 44.4
CANSAT64G1003 Cannabis sativa HOM05D003418 ORTHO05D004105 1.5e-08 63.5 123 40.7
Hma1.2p1_1057F.1_g252730 Hydrangea macrophylla HOM05D003418 ORTHO05D004105 1.5e-08 63.5 64 60.9
Ah.02g130820 Amaranthus hybridus HOM05D000660 ORTHO05D000766 5.9e-08 61.6 110 39.1
Zm00001eb102460 Zea mays HOM05D003418 ORTHO05D004105 7.7e-08 61.2 85 41.2
Zm00001eb364310 Zea mays HOM05D003418 ORTHO05D011080 1.0e-07 60.8 90 44.4
Os09g0507400 Oryza sativa ssp. japonica HOM05D003418 ORTHO05D004105 1.7e-07 60.1 102 39.2
unitig_749.g13308 Utricularia gibba HOM05D003418 ORTHO05D004105 1.7e-07 60.1 86 43.0
Glyma.19G093400 Glycine max HOM05D003418 ORTHO05D004105 2.2e-07 59.7 102 38.2
SalBow4G0150 Salvia bowleyana HOM05D003418 ORTHO05D004105 2.9e-07 59.3 105 41.0
SalBow7G0626 Salvia bowleyana HOM05D003418 ORTHO05D004105 2.9e-07 59.3 101 41.6
SHI04041 Sapria himalayana HOM05D000704 ORTHO05D000526 6.5e-07 58.2 105 38.1
SalBow4G1936 Salvia bowleyana HOM05D003418 ORTHO05D004105 8.5e-07 57.8 111 37.8
Cc07_g00970 Coffea canephora HOM05D003418 ORTHO05D004105 1.1e-06 57.4 110 36.4
Eucgr.I01636 Eucalyptus grandis HOM05D003418 ORTHO05D004105 1.9e-06 56.6 114 36.0
arahy.Tifrunner.gnm1.ann1.V4TZMI Arachis hypogaea HOM05D003418 ORTHO05D004105 5.5e-06 55.1 86 46.5
arahy.Tifrunner.gnm1.ann1.XFVS70 Arachis hypogaea HOM05D003418 ORTHO05D004105 5.5e-06 55.1 86 46.5
Medtr5g078400 Medicago truncatula HOM05D003418 ORTHO05D004105 5.5e-06 55.1 68 47.1
Lsat_1_v5_gn_2_93281 Lactuca sativa HOM05D003418 ORTHO05D004105 7.2e-06 54.7 97 38.1


User provided reference genes

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