Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03273 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 1.2e-90 336.7 192 100.0
Aqoxy5G03167 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 7.4e-80 300.8 192 92.2
Nn4g22156 Nelumbo nucifera HOM05D005729 ORTHO05D007026 7.6e-61 237.7 185 74.1
TAR371G0439 Trochodendron aralioides HOM05D005729 ORTHO05D007026 1.7e-60 236.5 193 73.1
Dinv33283 Davidia involucrata HOM05D005729 ORTHO05D007026 2.7e-58 229.2 203 69.5
Actinidia19554 Actinidia chinensis HOM05D005729 ORTHO05D007026 2.3e-57 226.1 194 69.6
ClCG01G007820 Citrullus lanatus HOM05D005729 ORTHO05D007026 3.9e-57 225.3 192 65.1
Glyma.16G049200 Glycine max HOM05D005729 ORTHO05D007026 1.9e-56 223.0 194 70.1
MELO3C005111.2 Cucumis melo HOM05D005729 ORTHO05D007026 2.5e-56 222.6 192 66.7
Glyma.19G102200 Glycine max HOM05D005729 ORTHO05D007026 2.5e-56 222.6 192 68.2
Phvul.001G085400 Phaseolus vulgaris HOM05D005729 ORTHO05D007026 3.7e-55 218.8 193 68.9
CsaV3_5G024890 Cucumis sativus L. HOM05D005729 ORTHO05D007026 1.1e-54 217.2 192 65.6
Manes.04G092600 Manihot esculenta HOM05D005729 ORTHO05D007026 2.4e-54 216.1 191 60.7
Cpa.g.sc9.286 Carica papaya HOM05D005729 ORTHO05D007026 5.3e-54 214.9 195 66.7
Sed0006238 Sechium edule HOM05D005729 ORTHO05D007026 5.3e-54 214.9 192 64.6
PGR142G3540 Punica granatum HOM05D005729 ORTHO05D007026 1.2e-53 213.8 192 60.9
Oeu003419.1 Olea europaea HOM05D005729 ORTHO05D007026 5.9e-53 211.5 195 70.3
Lj1g0015500 Lotus japonicus HOM05D005729 ORTHO05D007026 1.0e-52 210.7 192 68.2
CANSAT64G2014 Cannabis sativa HOM05D005729 ORTHO05D007026 1.3e-52 210.3 189 67.2
MBI07_g07331_MAGBIO Magnolia biondii HOM05D005729 ORTHO05D007026 1.7e-52 209.9 191 67.0
TPR.G10334 Trifolium pratense HOM05D005729 ORTHO05D007026 1.7e-52 209.9 192 68.2
MD00G1041400 Malus domestica HOM05D005729 ORTHO05D007026 2.2e-52 209.5 191 64.4
Medtr7g083930 Medicago truncatula HOM05D005729 ORTHO05D007026 5.0e-52 208.4 197 65.5
Lalb_Chr22g0359961 Lupinus albus HOM05D005729 ORTHO05D007026 6.5e-52 208.0 197 66.0
SalBow7G1413 Salvia bowleyana HOM05D005729 ORTHO05D007026 6.5e-52 208.0 191 67.5
Prupe.2G125900 Prunus persica HOM05D005729 ORTHO05D007026 8.5e-52 207.6 192 66.1
Solyc02g094490.4 Solanum lycopersicum HOM05D005729 ORTHO05D007026 8.5e-52 207.6 191 64.9
TAR629G2671 Trochodendron aralioides HOM05D005729 ORTHO05D007026 8.5e-52 207.6 193 66.8
Duzib187G1006 Durio zibethinus HOM05D005729 ORTHO05D007026 1.4e-51 206.8 191 62.8
MD05G1139400 Malus domestica HOM05D005729 ORTHO05D007026 1.4e-51 206.8 191 63.9
Sed0018343 Sechium edule HOM05D005729 ORTHO05D007026 1.4e-51 206.8 193 65.3
ATR0559G324 Amborella trichopoda HOM05D005729 ORTHO05D007026 5.5e-51 204.9 203 62.1
Dinv25620 Davidia involucrata HOM05D000884 ORTHO05D002127 2.1e-50 203.0 196 65.8
TAR628G1373 Trochodendron aralioides HOM05D005729 ORTHO05D007026 2.1e-50 203.0 193 66.3
DCAR_014472 Daucus carota HOM05D005729 ORTHO05D007026 1.0e-49 200.7 195 63.1
arahy.Tifrunner.gnm1.ann1.33W0XH Arachis hypogaea HOM05D005729 ORTHO05D007026 1.8e-49 199.9 198 61.1
CSS0020873 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 5.1e-49 198.4 195 62.6
CiPaw.03G002600 Carya illinoinensis HOM05D005729 ORTHO05D007026 8.8e-49 197.6 192 63.5
THA.LOC104815860 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 8.8e-49 197.6 190 62.6
HanXRQChr14g0451391 Helianthus annuus HOM05D005729 ORTHO05D007026 1.5e-48 196.8 194 63.9
Lsat_1_v5_gn_2_94961 Lactuca sativa HOM05D005729 ORTHO05D007026 1.5e-48 196.8 192 64.6
RcHm_v2.0_Chr5g0049531 Rosa chinensis HOM05D005729 ORTHO05D007026 4.4e-48 195.3 191 60.2
Thecc.04G047000 Theobroma cacao HOM05D005729 ORTHO05D007026 4.4e-48 195.3 195 62.1
unitig_92.g28207 Utricularia gibba HOM05D005729 ORTHO05D007026 5.7e-48 194.9 195 64.1
Psat3g093680 Pisum sativum HOM05D005729 ORTHO05D007026 7.4e-48 194.5 199 62.8
Potri.014G145600 Populus trichocarpa HOM05D005729 ORTHO05D007026 3.7e-47 192.2 192 58.9
Migut.K01484 Erythranthe guttata HOM05D005729 ORTHO05D007026 4.8e-47 191.8 189 67.2
SGA_v2.0_scaffold47G17637 Striga asiatica HOM05D005729 ORTHO05D007026 4.8e-47 191.8 195 63.6
Eucgr.G01937 Eucalyptus grandis HOM05D005729 ORTHO05D007026 1.1e-46 190.7 198 59.6
FAN22G1114 Fragaria x ananassa HOM05D005729 ORTHO05D007026 1.1e-46 190.7 192 58.9
Potri.002G237000 Populus trichocarpa HOM05D005729 ORTHO05D007026 3.1e-46 189.1 190 62.6
Ca_08134_v3 Cicer arietinum L. HOM05D005729 ORTHO05D007026 7.0e-46 188.0 192 62.0
FvH4_4g34010 Fragaria vesca HOM05D005729 ORTHO05D007026 1.2e-45 187.2 192 58.9
FAN17G0918 Fragaria x ananassa HOM05D005729 ORTHO05D007026 1.2e-45 187.2 192 58.3
QL11p027744 Quercus lobata HOM05D005729 ORTHO05D007026 1.2e-45 187.2 189 65.1
FAN21G1155 Fragaria x ananassa HOM05D005729 ORTHO05D007026 1.5e-45 186.8 192 60.9
Peaxi162Scf00420g00083 Petunia axillaris HOM05D005729 ORTHO05D007026 3.4e-45 185.7 191 61.3
EL10As7g23751 Beta vulgaris HOM05D005729 ORTHO05D007026 7.7e-45 184.5 191 60.7
PGSC0003DMG400035897 Solanum tuberosum HOM05D005729 ORTHO05D007026 1.0e-44 184.1 191 61.8
FAN25G1272 Fragaria x ananassa HOM05D005729 ORTHO05D007026 2.2e-44 183.0 192 60.9
Lju41C60T1 Lonicera japonica HOM05D005729 ORTHO05D007026 2.2e-44 183.0 204 61.3
TWI34G0826 Tripterygium wilfordii HOM05D005729 ORTHO05D007026 3.8e-44 182.2 195 59.5
Ciclev10016760m.g Citrus clementina HOM05D005729 ORTHO05D007026 5.0e-44 181.8 191 59.7
Thhalv10017252m.g Eutrema salsugineum HOM05D005729 ORTHO05D007026 5.0e-44 181.8 194 59.8
HPP92_011631 Vanilla planifolia HOM05D005729 ORTHO05D007026 6.5e-44 181.4 190 61.6
FAN12G1178 Fragaria x ananassa HOM05D005729 ORTHO05D007026 8.5e-44 181.0 192 57.8
Sopen02g039170 Solanum pennellii HOM05D005729 ORTHO05D007026 1.1e-43 180.6 191 60.2
CAN.G473.157 Capsicum annuum HOM05D005729 ORTHO05D007026 1.4e-43 180.3 186 62.9
Ah.02g128910 Amaranthus hybridus HOM05D005729 ORTHO05D007026 3.2e-43 179.1 192 60.4
EL10Ac6g13393 Beta vulgaris HOM05D005729 ORTHO05D007026 7.2e-43 177.9 192 60.9
CARHR125040 Cardamine hirsuta HOM05D005729 ORTHO05D007026 1.2e-42 177.2 192 57.8
Zm00001eb183750 Zea mays HOM05D005729 ORTHO05D007026 2.1e-42 176.4 190 53.2
THA.LOC104826200 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 4.7e-42 175.3 188 61.2
ECA238G1999 Erigeron canadensis HOM05D005729 ORTHO05D007026 8.0e-42 174.5 193 58.5
Gohir.D07G239700 Gossypium hirsutum HOM05D005729 ORTHO05D007026 5.2e-41 171.8 191 56.5
Nitab4.5_0002172g0090 Nicotiana tabacum HOM05D005729 ORTHO05D007026 8.8e-41 171.0 189 60.3
Atru.chr6.2652 Acer truncatum HOM05D005729 ORTHO05D007026 1.5e-40 170.2 191 57.1
Duzib264G0852 Durio zibethinus HOM05D005729 ORTHO05D007026 2.6e-40 169.5 194 56.2
Rhsim08G0039300 Rhododendron simsii HOM05D005729 ORTHO05D007026 5.7e-40 168.3 140 70.7
Gorai.001G275800 Gossypium raimondii HOM05D005729 ORTHO05D007026 9.7e-40 167.5 191 56.0
Zm00001eb246070 Zea mays HOM05D005729 ORTHO05D007026 1.7e-39 166.8 187 51.3
Aa31LG5G5560 Aethionema arabicum HOM05D005729 ORTHO05D007026 1.8e-38 163.3 196 56.1
CSS0008758 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 1.8e-38 163.3 135 72.6
Os02g0595400 Oryza sativa ssp. japonica HOM05D005729 ORTHO05D007026 1.8e-38 163.3 190 56.3
Sp4g13900 Schrenkiella parvula HOM05D005729 ORTHO05D007026 3.1e-38 162.5 193 54.9
PSO478G2072 Papaver somniferum HOM05D005729 ORTHO05D007026 5.3e-38 161.8 191 50.8
Sc07g0003710 Simmondsia chinensis HOM05D005729 ORTHO05D007026 5.3e-38 161.8 190 58.4
BcaC02g07982 Brassica carinata HOM05D005729 ORTHO05D007026 1.6e-37 160.2 194 54.6
C04p61110 Brassica napus HOM05D005729 ORTHO05D007026 1.6e-37 160.2 194 54.6
BolC4t27596H Brassica oleracea HOM05D005729 ORTHO05D007026 1.6e-37 160.2 194 54.6
CSS0019060 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 1.0e-36 157.5 135 71.1
Gohir.A07G232500 Gossypium hirsutum HOM05D005729 ORTHO05D007026 1.0e-36 157.5 191 53.9
A04p24280 Brassica napus HOM05D005729 ORTHO05D007026 2.9e-36 156.0 194 53.6
BraA04t17947Z Brassica rapa HOM05D005729 ORTHO05D007026 2.9e-36 156.0 194 53.6
Cfa007167 Carpinus fangiana HOM05D005729 ORTHO05D007026 2.9e-36 156.0 193 56.0
AL4G26660 Arabidopsis lyrata HOM05D005729 ORTHO05D007026 6.5e-36 154.8 192 53.1
Haze_19869 Corylus avellana HOM05D005729 ORTHO05D007026 8.5e-36 154.5 188 57.4
Cfa016824 Carpinus fangiana HOM05D005729 ORTHO05D007026 1.5e-35 153.7 193 55.4
Haze_14943 Corylus avellana HOM05D005729 ORTHO05D007026 4.2e-35 152.1 193 55.4
AT2G31410 Arabidopsis thaliana HOM05D005729 ORTHO05D007026 7.2e-35 151.4 193 52.8
Nitab4.5_0000519g0260 Nicotiana tabacum HOM05D005729 ORTHO05D007026 1.2e-34 150.6 148 65.5
BcaB01g04046 Brassica carinata HOM05D005729 ORTHO05D007026 1.6e-34 150.2 195 52.3
Carub.0004s1273 Capsella rubella HOM05D005729 ORTHO05D007026 2.7e-34 149.4 193 53.9
A03p17590 Brassica napus HOM05D005729 ORTHO05D007026 1.8e-33 146.7 192 53.1
Pp3c11_25830 Physcomitrium patens HOM05D005729 ORTHO05D007026 2.3e-33 146.4 186 45.2
PSO017G0758 Papaver somniferum HOM05D005729 ORTHO05D007026 3.0e-33 146.0 191 53.9
AUR62036639 Chenopodium quinoa HOM05D005729 ORTHO05D007026 5.2e-33 145.2 187 54.5
BraA03t11026Z Brassica rapa HOM05D005729 ORTHO05D007026 6.7e-33 144.8 193 52.8
C03p20700 Brassica napus HOM05D005729 ORTHO05D007026 1.2e-32 144.1 190 53.7
BolC3t14453H Brassica oleracea HOM05D005729 ORTHO05D007026 1.2e-32 144.1 190 53.7
RcHm_v2.0_Chr6g0252241 Rosa chinensis HOM05D005729 ORTHO05D007026 1.5e-32 143.7 167 52.1
CDE06G2057 Ceratophyllum demersum HOM05D005729 ORTHO05D007026 3.7e-31 139.0 122 60.7
RcHm_v2.0_Chr2g0115461 Rosa chinensis HOM05D005729 ORTHO05D007026 5.3e-30 135.2 167 49.1
RcHm_v2.0_Chr7g0240621 Rosa chinensis HOM05D005729 ORTHO05D007026 5.3e-30 135.2 167 48.5
Sabra02G0180500 Salix brachista HOM05D005729 ORTHO05D007026 1.0e-28 131.0 184 43.5
RcHm_v2.0_Chr5g0057561 Rosa chinensis HOM05D005729 ORTHO05D007026 5.0e-28 128.6 158 55.1
COL.COLO4_13365 Corchorus olitorius HOM05D005729 ORTHO05D007026 1.2e-24 117.5 116 51.7
RcHm_v2.0_Chr2g0117931 Rosa chinensis HOM05D005729 ORTHO05D007026 1.5e-24 117.1 154 54.5
AUR62034632 Chenopodium quinoa HOM05D000604 ORTHO05D004512 2.0e-24 116.7 130 50.0
RcHm_v2.0_Chr6g0295141 Rosa chinensis HOM05D005729 ORTHO05D007026 2.0e-24 116.7 111 66.7
RcHm_v2.0_Chr1g0315821 Rosa chinensis HOM05D005729 ORTHO05D007026 1.7e-23 113.6 154 53.9
RcHm_v2.0_Chr5g0026441 Rosa chinensis HOM05D005729 ORTHO05D007026 1.7e-23 113.6 135 50.4
Cc07_g01230 Coffea canephora HOM05D005729 ORTHO05D007026 1.4e-22 110.5 202 48.5
RcHm_v2.0_Chr6g0272931 Rosa chinensis HOM05D005729 ORTHO05D007026 2.4e-22 109.8 139 50.4
Mapoly0127s0012 Marchantia polymorpha HOM05D005729 ORTHO05D007026 4.5e-21 105.5 186 43.5
Hma1.2p1_0033F.1_g021130 Hydrangea macrophylla HOM05D005729 ORTHO05D007026 1.5e-16 90.5 104 59.6
Haze_19868 Corylus avellana HOM05D005729 ORTHO05D007026 2.6e-16 89.7 101 50.5
Sc14g0008230 Simmondsia chinensis HOM05D005729 ORTHO05D007026 1.7e-15 87.0 135 41.5
Atru.chr5.655 Acer truncatum HOM05D000598 ORTHO05D000480 1.1e-14 84.3 157 47.1
Psat4g074600 Pisum sativum HOM05D005729 ORTHO05D007026 3.1e-14 82.8 106 50.0
Psat4g074560 Pisum sativum HOM05D005729 ORTHO05D007026 8.6e-12 74.7 127 38.6
Lalb_Chr14g0364061 Lupinus albus HOM05D005729 ORTHO05D007026 4.3e-11 72.4 59 84.7
Solyc03g083260.1 Solanum lycopersicum HOM05D005729 ORTHO05D007026 9.5e-11 71.2 88 45.5
CBR_g4589 Chara braunii HOM05D005729 ORTHO05D007026 8.0e-10 68.2 187 41.7
FvH4_3g27021 Fragaria vesca HOM05D005729 ORTHO05D007026 7.0e-06 55.1 68 50.0


User provided reference genes

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