Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03108 Aquilegia oxysepala HOM05D005950 ORTHO05D008673 1.2e-164 583.2 304 100.0
TAR371G0811 Trochodendron aralioides HOM05D005950 ORTHO05D008673 1.4e-109 400.2 266 80.1
TAR629G3081 Trochodendron aralioides HOM05D005950 ORTHO05D008673 3.5e-108 395.6 254 79.9
CSS0041196 Camellia sinensis var. sinensis HOM05D005950 ORTHO05D008673 1.4e-104 383.6 242 78.9
QL03p049137 Quercus lobata HOM05D005950 ORTHO05D008673 1.8e-104 383.3 286 69.9
MD13G1130900 Malus domestica HOM05D005950 ORTHO05D008673 2.3e-104 382.9 275 70.2
CSS0009236 Camellia sinensis var. sinensis HOM05D005950 ORTHO05D008673 3.0e-104 382.5 242 78.5
PSO017G6070 Papaver somniferum HOM05D005950 ORTHO05D008673 8.9e-104 380.9 288 70.8
Dinv03756 Davidia involucrata HOM05D005950 ORTHO05D008673 1.5e-103 380.2 293 68.9
MBI10_g32324_MAGBIO Magnolia biondii HOM05D005950 ORTHO05D008673 2.6e-103 379.4 249 76.7
PSO478G4484 Papaver somniferum HOM05D005950 ORTHO05D008673 2.6e-103 379.4 274 74.5
CiPaw.05G101200 Carya illinoinensis HOM05D005950 ORTHO05D008673 4.4e-103 378.6 246 76.4
Manes.08G101200 Manihot esculenta HOM05D005950 ORTHO05D008673 7.5e-103 377.9 246 76.4
GSVIVG01001090001 Vitis vinifera HOM05D005950 ORTHO05D008673 9.8e-103 377.5 259 75.3
FvH4_4g22640 Fragaria vesca HOM05D005950 ORTHO05D008673 1.3e-102 377.1 257 74.3
RhsimUnG0153300 Rhododendron simsii HOM05D005950 ORTHO05D008673 1.3e-102 377.1 246 75.6
FAN12G2095 Fragaria x ananassa HOM05D005950 ORTHO05D008673 1.7e-102 376.7 257 73.9
MELO3C022359.2 Cucumis melo HOM05D005950 ORTHO05D008673 2.2e-102 376.3 250 75.6
Rhsim12G0072500 Rhododendron simsii HOM05D005950 ORTHO05D008673 2.2e-102 376.3 246 75.6
Prupe.1G214800 Prunus persica HOM05D005950 ORTHO05D008673 2.8e-102 375.9 285 68.1
CsaV3_6G007730 Cucumis sativus L. HOM05D005950 ORTHO05D008673 6.3e-102 374.8 250 75.2
Eucgr.B03560 Eucalyptus grandis HOM05D005950 ORTHO05D008673 8.3e-102 374.4 249 75.9
Haze_12503 Corylus avellana HOM05D005950 ORTHO05D008673 1.4e-101 373.6 264 71.2
FAN07G2488 Fragaria x ananassa HOM05D005950 ORTHO05D008673 1.4e-101 373.6 257 73.5
FAN17G1731 Fragaria x ananassa HOM05D005950 ORTHO05D008673 2.4e-101 372.9 253 73.9
RcHm_v2.0_Chr4g0428871 Rosa chinensis HOM05D005950 ORTHO05D008673 3.2e-101 372.5 253 75.1
Duzib248G1270 Durio zibethinus HOM05D005950 ORTHO05D008673 5.4e-101 371.7 246 73.2
PGR102G2360 Punica granatum HOM05D005950 ORTHO05D008673 7.0e-101 371.3 248 75.4
Gorai.002G021400 Gossypium raimondii HOM05D005950 ORTHO05D008673 9.2e-101 370.9 254 70.5
Atru.chr12.1419 Acer truncatum HOM05D005950 ORTHO05D008673 1.2e-100 370.5 242 75.2
Thecc.02G192100 Theobroma cacao HOM05D005950 ORTHO05D008673 1.2e-100 370.5 288 67.0
Potri.001G100300 Populus trichocarpa HOM05D005950 ORTHO05D008673 2.0e-100 369.8 278 68.0
COL.COLO4_36001 Corchorus olitorius HOM05D005950 ORTHO05D008673 2.7e-100 369.4 243 74.9
Lsat_1_v5_gn_3_32320 Lactuca sativa HOM05D005950 ORTHO05D008673 1.7e-99 366.7 245 75.1
TWI36G0089 Tripterygium wilfordii HOM05D005950 ORTHO05D008673 1.7e-99 366.7 258 70.2
Gohir.A01G020600 Gossypium hirsutum HOM05D005950 ORTHO05D008673 2.3e-99 366.3 254 70.1
HanXRQChr06g0175111 Helianthus annuus HOM05D005950 ORTHO05D008673 3.9e-99 365.5 286 67.5
Lalb_Chr06g0164721 Lupinus albus HOM05D005950 ORTHO05D008673 3.9e-99 365.5 245 72.2
Ciclev10005525m.g Citrus clementina HOM05D005950 ORTHO05D008673 8.6e-99 364.4 246 73.2
Cpa.g.sc182.2 Carica papaya HOM05D005950 ORTHO05D008673 1.9e-98 363.2 258 70.9
THA.LOC104820536 Tarenaya hassleriana HOM05D005950 ORTHO05D008673 2.5e-98 362.8 254 71.3
Hma1.2p1_0660F.1_g197630 Hydrangea macrophylla HOM05D005950 ORTHO05D008673 3.3e-98 362.5 238 74.8
vmacro16072 Vaccinium macrocarpon HOM05D005950 ORTHO05D008673 9.5e-98 360.9 271 69.4
Sed0005763 Sechium edule HOM05D005950 ORTHO05D008673 2.1e-97 359.8 286 66.1
Ah.03g135560 Amaranthus hybridus HOM05D005950 ORTHO05D008673 4.7e-97 358.6 245 72.2
Hund27394 Selenicereus undatus HOM05D005950 ORTHO05D008673 6.1e-97 358.2 245 71.4
Sc19g0003090 Simmondsia chinensis HOM05D005950 ORTHO05D008673 8.0e-97 357.8 288 66.0
TPR.G7754 Trifolium pratense HOM05D005950 ORTHO05D008673 8.0e-97 357.8 248 72.6
BcaC05g26819 Brassica carinata HOM05D005950 ORTHO05D008673 1.0e-96 357.5 271 68.3
CANSAT01G2759 Cannabis sativa HOM05D005950 ORTHO05D008673 1.8e-96 356.7 271 68.3
Phvul.007G000300 Phaseolus vulgaris HOM05D005950 ORTHO05D008673 2.3e-96 356.3 252 71.0
BolC5t31407H Brassica oleracea HOM05D005950 ORTHO05D008673 3.1e-96 355.9 291 64.3
Cc11_g15000 Coffea canephora HOM05D005950 ORTHO05D008673 5.2e-96 355.1 260 66.9
BcaB07g32425 Brassica carinata HOM05D005950 ORTHO05D008673 8.9e-96 354.4 235 74.0
DCAR_024633 Daucus carota HOM05D000512 ORTHO05D008673 8.9e-96 354.4 248 72.2
LjContig00470g0001843 Lotus japonicus HOM05D005950 ORTHO05D008673 8.9e-96 354.4 280 67.1
Migut.K01055 Erythranthe guttata HOM05D005950 ORTHO05D008673 2.6e-95 352.8 263 69.6
Actinidia33998 Actinidia chinensis HOM05D005950 ORTHO05D008673 5.8e-95 351.7 238 72.7
A09p37910 Brassica napus HOM05D005950 ORTHO05D008673 9.8e-95 350.9 253 71.1
C05p26890 Brassica napus HOM05D005950 ORTHO05D008673 9.8e-95 350.9 292 63.7
Medtr1g099520 Medicago truncatula HOM05D005950 ORTHO05D008673 9.8e-95 350.9 247 70.0
Peaxi162Scf00023g00931 Petunia axillaris HOM05D005950 ORTHO05D008673 9.8e-95 350.9 255 67.5
AUR62005715 Chenopodium quinoa HOM05D005950 ORTHO05D008673 1.3e-94 350.5 240 71.7
VMungo0720G2460 Vigna mungo HOM05D005950 ORTHO05D008673 1.3e-94 350.5 251 71.3
BraA09t39303Z Brassica rapa HOM05D005950 ORTHO05D008673 6.4e-94 348.2 272 66.9
SalBow2G0445 Salvia bowleyana HOM05D005950 ORTHO05D008673 6.4e-94 348.2 244 70.5
Aa31sc45G70 Aethionema arabicum HOM05D005950 ORTHO05D008673 8.3e-94 347.8 283 64.3
Carub.0001s2657 Capsella rubella HOM05D005950 ORTHO05D008673 1.1e-93 347.4 275 64.4
Nitab4.5_0006153g0020 Nicotiana tabacum HOM05D005950 ORTHO05D008673 1.1e-93 347.4 241 70.5
CAN.G624.24 Capsicum annuum HOM05D005950 ORTHO05D008673 1.9e-93 346.7 289 61.2
CDE02G3863 Ceratophyllum demersum HOM05D005950 ORTHO05D008673 3.2e-93 345.9 219 76.3
Thhalv10008446m.g Eutrema salsugineum HOM05D005950 ORTHO05D008673 4.1e-93 345.5 241 70.5
Oeu027106.1 Olea europaea HOM05D005950 ORTHO05D008673 4.1e-93 345.5 244 69.7
ATR0582G132 Amborella trichopoda HOM05D005950 ORTHO05D008673 9.2e-93 344.4 259 64.5
CARHR027610 Cardamine hirsuta HOM05D005950 ORTHO05D008673 1.2e-92 344.0 232 72.8
Sabra01G0075200 Salix brachista HOM05D005950 ORTHO05D008673 2.0e-92 343.2 295 62.0
PGSC0003DMG400028387 Solanum tuberosum HOM05D005950 ORTHO05D008673 2.0e-92 343.2 285 61.1
AL1G41670 Arabidopsis lyrata HOM05D005950 ORTHO05D008673 3.5e-92 342.4 273 64.8
arahy.Tifrunner.gnm1.ann1.MTDN4F Arachis hypogaea HOM05D005950 ORTHO05D008673 4.6e-92 342.0 263 65.8
MSTRG.8054 Avicennia marina HOM05D005950 ORTHO05D008673 6.0e-92 341.7 240 69.6
Sp1g24330 Schrenkiella parvula HOM05D005950 ORTHO05D008673 7.8e-92 341.3 271 64.2
AT1G28140 Arabidopsis thaliana HOM05D005950 ORTHO05D008673 1.0e-91 340.9 279 62.7
Solyc05g012700.3 Solanum lycopersicum HOM05D005950 ORTHO05D008673 1.0e-91 340.9 285 60.4
EL10Ac6g13611 Beta vulgaris HOM05D005950 ORTHO05D008673 1.7e-91 340.1 243 69.1
Nitab4.5_0000208g0380 Nicotiana tabacum HOM05D005950 ORTHO05D008673 2.3e-91 339.7 241 68.9
Sopen05g007530 Solanum pennellii HOM05D005950 ORTHO05D008673 2.3e-91 339.7 285 60.0
HPP92_007045 Vanilla planifolia HOM05D005950 ORTHO05D008673 7.3e-90 334.7 293 59.0
Os03g0850600 Oryza sativa ssp. japonica HOM05D005950 ORTHO05D008673 1.6e-89 333.6 228 72.4
SGA_v2.0_scaffold157G37356 Striga asiatica HOM05D005950 ORTHO05D008673 2.0e-87 326.6 247 67.2
Mapoly0027s0093 Marchantia polymorpha HOM05D005950 ORTHO05D008673 2.4e-85 319.7 268 61.9
Zm00001eb064540 Zea mays HOM05D005950 ORTHO05D008673 9.2e-85 317.8 244 66.0
Psat6g195320 Pisum sativum HOM05D005950 ORTHO05D008673 1.6e-84 317.0 225 70.7
ClCG06G001700 Citrullus lanatus HOM05D005950 ORTHO05D008673 2.7e-84 316.2 250 67.2
Pp3c8_12800 Physcomitrium patens HOM05D005950 ORTHO05D008673 3.5e-84 315.8 280 58.2
Ca_10708_v3 Cicer arietinum L. HOM05D005950 ORTHO05D008673 6.0e-84 315.1 212 74.1
unitig_747.g21110 Utricularia gibba HOM05D005950 ORTHO05D008673 2.3e-83 313.2 244 64.8
Glyma.20G249800 Glycine max HOM05D005950 ORTHO05D008673 6.2e-81 305.1 234 69.2
Lj3A1077T57 Lonicera japonica HOM05D005950 ORTHO05D008673 6.8e-80 301.6 203 75.9
SMO367G1143 Selaginella moellendorffii HOM05D005950 ORTHO05D008673 3.4e-79 299.3 248 57.7
AagrBONN_evm.TU.Sc2ySwM_344.2741 Anthoceros agrestis HOM05D005950 ORTHO05D008673 1.3e-78 297.4 288 56.9
Duzib052G0358 Durio zibethinus HOM05D005950 ORTHO05D008673 6.4e-78 295.0 228 68.4
SEGI_01129 Sequoiadendron giganteum HOM05D005950 ORTHO05D008673 3.2e-77 292.7 208 68.8
CBR_g3659 Chara braunii HOM05D005950 ORTHO05D008673 1.9e-74 283.5 245 59.2
arahy.Tifrunner.gnm1.ann1.PXY63F Arachis hypogaea HOM05D005950 ORTHO05D008673 1.8e-72 276.9 263 56.3
AUR62028840 Chenopodium quinoa HOM05D005950 ORTHO05D008673 1.4e-69 267.3 204 67.2
Hma1.2p1_0660F.1_g197620 Hydrangea macrophylla HOM05D005950 ORTHO05D008673 1.0e-67 261.2 179 72.1
Nn3g16271 Nelumbo nucifera HOM05D005950 ORTHO05D008673 8.7e-67 258.1 297 53.2
CDE06G2125 Ceratophyllum demersum HOM05D005950 ORTHO05D008673 5.1e-59 232.3 140 77.9
MCO02G210 Micromonas commoda HOM05D005950 ORTHO05D008673 3.7e-49 199.5 216 49.5
Cre04.g228450 Chlamydomonas reinhardtii HOM05D005950 ORTHO05D008673 4.2e-45 186.0 223 45.7
TWI18G1378 Tripterygium wilfordii HOM05D005950 ORTHO05D008673 1.2e-44 184.5 148 62.2
PRCOL_00003015 Prasinoderma coloniale HOM05D005950 ORTHO05D008673 1.3e-41 174.5 214 43.5
Gohir.D01G019100 Gossypium hirsutum HOM05D005950 ORTHO05D008673 2.3e-35 153.7 122 61.5
TPR.G36353 Trifolium pratense HOM05D005950 ORTHO05D008673 1.0e-30 138.3 87 73.6
Peaxi162Scf00040g00101 Petunia axillaris HOM05D005950 ORTHO05D008673 1.8e-27 127.5 137 51.1
MD16G1141000 Malus domestica HOM05D005950 ORTHO05D020170 1.4e-19 101.3 65 73.8
Hma1.2p1_0660F.1_g197640 Hydrangea macrophylla HOM05D005950 ORTHO05D020170 3.9e-19 99.8 56 82.1
Zm00001eb422050 Zea mays HOM05D005950 ORTHO05D008673 5.1e-19 99.4 83 57.8
FAN25G3256 Fragaria x ananassa HOM05D005950 ORTHO05D203075 3.3e-18 96.7 88 61.4
Zm00001eb141620 Zea mays HOM05D005950 ORTHO05D444810 2.2e-17 94.0 68 63.2
FAN20G0916 Fragaria x ananassa HOM05D005950 ORTHO05D020170 6.3e-17 92.4 63 71.4
CDE06G1299 Ceratophyllum demersum HOM05D005950 ORTHO05D130736 3.5e-15 86.7 65 66.2
Peaxi162Scf00003g00713 Petunia axillaris HOM05D005950 ORTHO05D305722 1.0e-14 85.1 136 39.0
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 8.5e-14 82.0 63 60.3
C05p26860 Brassica napus HOM05D005950 ORTHO05D020170 1.9e-13 80.9 51 74.5
AL1G56270 Arabidopsis lyrata HOM05D005950 ORTHO05D000283 3.2e-13 80.1 62 62.9
Peaxi162Scf00059g01815 Petunia axillaris HOM05D005950 ORTHO05D306406 2.1e-12 77.4 170 34.1
BolC5t31405H Brassica oleracea HOM05D005950 ORTHO05D020170 3.6e-12 76.6 49 73.5
Glyma.10G298600 Glycine max HOM05D005950 ORTHO05D020170 1.0e-11 75.1 46 73.9
Peaxi162Scf00968g00313 Petunia axillaris HOM05D005950 ORTHO05D305879 2.3e-11 73.9 103 42.7
A09p37930 Brassica napus HOM05D005950 ORTHO05D020170 3.0e-11 73.6 53 67.9
Peaxi162Scf00141g00098 Petunia axillaris HOM05D005950 ORTHO05D306108 7.7e-07 58.9 43 62.8


User provided reference genes

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