Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03074 Aquilegia oxysepala HOM05D002468 ORTHO05D005371 6.3e-244 847.0 437 100.0
TAR629G1443 Trochodendron aralioides HOM05D002468 ORTHO05D005371 1.5e-208 729.6 438 85.2
TAR371G0123 Trochodendron aralioides HOM05D002468 ORTHO05D005371 6.8e-206 720.7 415 87.7
PSO017G4233 Papaver somniferum HOM05D002468 ORTHO05D005371 3.1e-203 711.8 441 83.4
Atru.chr12.1428 Acer truncatum HOM05D002468 ORTHO05D005371 1.2e-202 709.9 441 81.9
QL03p049039 Quercus lobata HOM05D002468 ORTHO05D005371 2.7e-202 708.8 439 82.2
Cfa009455 Carpinus fangiana HOM05D002468 ORTHO05D005371 3.5e-202 708.4 439 82.0
Ciclev10004979m.g Citrus clementina HOM05D002468 ORTHO05D005371 5.9e-202 707.6 439 82.2
PSO478G3355 Papaver somniferum HOM05D002468 ORTHO05D005371 1.7e-201 706.1 442 82.6
Dinv17539 Davidia involucrata HOM05D002468 ORTHO05D005371 3.8e-201 704.9 438 82.9
GSVIVG01001098001 Vitis vinifera HOM05D002468 ORTHO05D005371 3.8e-201 704.9 441 82.8
CiPaw.06G109900 Carya illinoinensis HOM05D002468 ORTHO05D005371 1.5e-200 703.0 439 82.0
Dinv03336 Davidia involucrata HOM05D002468 ORTHO05D005371 1.5e-200 703.0 437 82.4
Manes.09G188600 Manihot esculenta HOM05D002468 ORTHO05D005371 1.5e-200 703.0 441 81.0
CiPaw.05G100700 Carya illinoinensis HOM05D002468 ORTHO05D005371 3.3e-200 701.8 438 80.8
THA.LOC104807252 Tarenaya hassleriana HOM05D002468 ORTHO05D005371 1.6e-199 699.5 442 80.8
Actinidia30583 Actinidia chinensis HOM05D002468 ORTHO05D005371 2.1e-199 699.1 440 82.5
Manes.08G100600 Manihot esculenta HOM05D002468 ORTHO05D005371 3.6e-199 698.4 441 81.2
Rhsim12G0017100 Rhododendron simsii HOM05D002468 ORTHO05D005371 6.1e-199 697.6 442 82.1
CSS0030444 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 1.4e-198 696.4 438 81.7
CSS0032961 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 1.4e-198 696.4 438 81.7
Eucgr.G01978 Eucalyptus grandis HOM05D002468 ORTHO05D005371 1.4e-198 696.4 441 81.4
Potri.001G068200 Populus trichocarpa HOM05D002468 ORTHO05D005371 1.8e-198 696.0 439 81.5
MD16G1141700 Malus domestica HOM05D002468 ORTHO05D005371 1.2e-197 693.3 440 81.1
Sabra03G0117600 Salix brachista HOM05D002468 ORTHO05D005371 1.2e-197 693.3 438 80.8
Peaxi162Scf00842g00319 Petunia axillaris HOM05D002468 ORTHO05D005371 2.6e-197 692.2 440 80.9
Prupe.1G214200 Prunus persica HOM05D002468 ORTHO05D005371 5.8e-197 691.0 440 80.7
PGR119G1329 Punica granatum HOM05D002468 ORTHO05D005371 1.3e-196 689.9 442 79.2
RcHm_v2.0_Chr4g0428801 Rosa chinensis HOM05D002468 ORTHO05D005371 1.1e-195 686.8 441 80.0
Solyc11g033288.1 Solanum lycopersicum HOM05D002468 ORTHO05D005371 1.1e-195 686.8 436 82.1
Sopen11g017140 Solanum pennellii HOM05D002468 ORTHO05D005371 2.4e-195 685.6 436 81.9
HanXRQChr17g0540381 Helianthus annuus HOM05D002468 ORTHO05D005371 5.4e-195 684.5 437 81.7
PGSC0003DMG402028027 Solanum tuberosum HOM05D002468 ORTHO05D005371 5.4e-195 684.5 436 82.6
FAN07G2580 Fragaria x ananassa HOM05D002468 ORTHO05D005371 1.6e-194 682.9 442 80.1
FvH4_4g22560 Fragaria vesca HOM05D002468 ORTHO05D005371 2.0e-194 682.6 442 79.9
ECA246G0169 Erigeron canadensis HOM05D002468 ORTHO05D005371 2.7e-194 682.2 435 81.8
Oeu010257.1 Olea europaea HOM05D002468 ORTHO05D005371 2.7e-194 682.2 440 80.0
TWI36G1422 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 2.7e-194 682.2 447 79.4
MBI07_g35982_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 3.5e-194 681.8 435 81.1
CAN.G624.1 Capsicum annuum HOM05D002468 ORTHO05D005371 4.6e-194 681.4 441 81.0
Lsat_1_v5_gn_3_32661 Lactuca sativa HOM05D002468 ORTHO05D005371 4.6e-194 681.4 436 81.9
MD13G1131400 Malus domestica HOM05D002468 ORTHO05D005371 4.6e-194 681.4 441 80.3
Thecc.02G191400 Theobroma cacao HOM05D002468 ORTHO05D005371 4.6e-194 681.4 441 79.4
CANSAT01G0579 Cannabis sativa HOM05D002468 ORTHO05D005371 6.0e-194 681.0 439 80.0
Gohir.A04G101700 Gossypium hirsutum HOM05D002468 ORTHO05D005371 6.0e-194 681.0 440 80.0
vmacro01017 Vaccinium macrocarpon HOM05D002468 ORTHO05D005371 6.0e-194 681.0 403 84.9
Haze_12509 Corylus avellana HOM05D002468 ORTHO05D005371 7.8e-194 680.6 413 83.3
CsaV3_4G002210 Cucumis sativus L. HOM05D002468 ORTHO05D005371 1.0e-193 680.2 442 78.3
TWI18G0725 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 1.0e-193 680.2 445 79.6
Cpa.g.sc38.67 Carica papaya HOM05D002468 ORTHO05D005371 1.3e-193 679.9 443 79.0
Gohir.D04G140900 Gossypium hirsutum HOM05D002468 ORTHO05D005371 3.0e-193 678.7 440 80.2
ClCG07G011940 Citrullus lanatus HOM05D002468 ORTHO05D005371 5.0e-193 677.9 442 79.0
arahy.Tifrunner.gnm1.ann1.PCZ0HW Arachis hypogaea HOM05D002468 ORTHO05D005371 1.1e-192 676.8 439 78.4
arahy.Tifrunner.gnm1.ann1.S6Z2J3 Arachis hypogaea HOM05D002468 ORTHO05D005371 1.1e-192 676.8 439 78.4
MSTRG.449 Avicennia marina HOM05D002468 ORTHO05D005371 1.5e-192 676.4 427 81.0
Gorai.012G125900 Gossypium raimondii HOM05D002468 ORTHO05D005371 1.9e-192 676.0 440 79.5
Thhalv10013572m.g Eutrema salsugineum HOM05D002468 ORTHO05D005371 2.5e-192 675.6 443 78.3
FAN17G0051 Fragaria x ananassa HOM05D002468 ORTHO05D005371 2.5e-192 675.6 441 79.4
Cc11_g14960 Coffea canephora HOM05D002468 ORTHO05D005371 4.3e-192 674.9 444 79.7
Duzib132G1053 Durio zibethinus HOM05D002468 ORTHO05D005371 4.3e-192 674.9 441 78.7
Lj1g0025256 Lotus japonicus HOM05D002468 ORTHO05D005371 5.6e-192 674.5 439 78.8
MELO3C017817.2 Cucumis melo HOM05D002468 ORTHO05D005371 1.2e-191 673.3 442 79.0
Sed0000476 Sechium edule HOM05D002468 ORTHO05D005371 1.6e-191 672.9 439 78.6
Hund14581 Selenicereus undatus HOM05D002468 ORTHO05D005371 1.6e-191 672.9 441 79.1
FAN12G2192 Fragaria x ananassa HOM05D002468 ORTHO05D005371 2.8e-191 672.2 439 79.3
EL10Ac6g13612 Beta vulgaris HOM05D002468 ORTHO05D005371 3.6e-191 671.8 439 78.4
BraA10t44546Z Brassica rapa HOM05D002468 ORTHO05D005371 3.6e-191 671.8 443 78.8
Carub.0006s1158 Capsella rubella HOM05D002468 ORTHO05D005371 3.6e-191 671.8 445 78.7
CARHR200010 Cardamine hirsuta HOM05D002468 ORTHO05D005371 4.7e-191 671.4 436 79.1
SalBow2G0960 Salvia bowleyana HOM05D002468 ORTHO05D005371 6.2e-191 671.0 441 78.9
AL6G24040 Arabidopsis lyrata HOM05D002468 ORTHO05D005371 1.1e-190 670.2 440 78.6
A10p24820 Brassica napus HOM05D002468 ORTHO05D005371 1.1e-190 670.2 444 78.6
Medtr7g006560 Medicago truncatula HOM05D002468 ORTHO05D005371 1.4e-190 669.8 439 77.7
TPR.G9718 Trifolium pratense HOM05D002468 ORTHO05D005371 1.4e-190 669.8 444 78.6
Duzib052G0101 Durio zibethinus HOM05D002468 ORTHO05D005371 3.1e-190 668.7 441 77.8
Sc11g0000080 Simmondsia chinensis HOM05D002468 ORTHO05D005371 3.1e-190 668.7 436 79.4
MSTRG.8058 Avicennia marina HOM05D002468 ORTHO05D005371 5.2e-190 667.9 442 77.8
AT5G13420 Arabidopsis thaliana HOM05D002468 ORTHO05D005371 6.8e-190 667.5 442 78.3
AUR62028839 Chenopodium quinoa HOM05D002468 ORTHO05D005371 1.2e-189 666.8 404 83.2
C02p06130 Brassica napus HOM05D002468 ORTHO05D005371 1.5e-189 666.4 443 78.1
AUR62005716 Chenopodium quinoa HOM05D002468 ORTHO05D005371 1.5e-189 666.4 404 83.2
Glyma.08G362900 Glycine max HOM05D002468 ORTHO05D005371 2.0e-189 666.0 441 79.1
Sp6g30600 Schrenkiella parvula HOM05D002468 ORTHO05D005371 2.6e-189 665.6 416 81.5
C09p63670 Brassica napus HOM05D002468 ORTHO05D005371 3.4e-189 665.2 443 77.7
BolC9t59208H Brassica oleracea HOM05D002468 ORTHO05D005371 3.4e-189 665.2 443 77.7
DCAR_024636 Daucus carota HOM05D002468 ORTHO05D005371 4.4e-189 664.8 438 80.1
BolC2t06554H Brassica oleracea HOM05D002468 ORTHO05D005371 5.8e-189 664.5 443 77.9
Ah.03g135540 Amaranthus hybridus HOM05D002468 ORTHO05D005371 7.5e-189 664.1 441 77.3
Sed0003563 Sechium edule HOM05D002468 ORTHO05D005371 7.5e-189 664.1 437 78.0
BcaC04g19118 Brassica carinata HOM05D002468 ORTHO05D005371 2.2e-188 662.5 442 78.1
Psat3g207000 Pisum sativum HOM05D002468 ORTHO05D005371 2.2e-188 662.5 448 77.7
HanXRQChr06g0175161 Helianthus annuus HOM05D002468 ORTHO05D005371 2.9e-188 662.1 381 87.4
Ca_04094_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 4.9e-188 661.4 437 78.9
VMungo1383G1406 Vigna mungo HOM05D002468 ORTHO05D005371 1.1e-187 660.2 444 77.5
BraA03t09933Z Brassica rapa HOM05D002468 ORTHO05D005371 1.9e-187 659.4 440 78.2
A03p05960 Brassica napus HOM05D002468 ORTHO05D005371 2.4e-187 659.1 440 78.4
Glyma.18G299100 Glycine max HOM05D002468 ORTHO05D005371 5.4e-187 657.9 442 78.5
A02p01910 Brassica napus HOM05D002468 ORTHO05D005371 2.7e-186 655.6 415 80.2
BraA02t05164Z Brassica rapa HOM05D002468 ORTHO05D005371 2.7e-186 655.6 415 80.2
MBI07_g48060_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 4.6e-186 654.8 477 73.6
Phvul.008G003600 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 1.7e-185 652.9 444 77.0
Lalb_Chr04g0257301 Lupinus albus HOM05D002468 ORTHO05D005371 2.3e-185 652.5 444 77.5
Migut.K01049 Erythranthe guttata HOM05D002468 ORTHO05D005371 3.3e-184 648.7 442 77.4
C03p07000 Brassica napus HOM05D002468 ORTHO05D005371 9.5e-184 647.1 441 76.6
BolC3t13199H Brassica oleracea HOM05D002468 ORTHO05D005371 9.5e-184 647.1 441 76.6
CDE05G3080 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 2.1e-183 646.0 396 81.1
Os01g0926300 Oryza sativa ssp. japonica HOM05D002468 ORTHO05D005371 2.3e-182 642.5 432 78.5
Zm00001eb363880 Zea mays HOM05D002468 ORTHO05D005371 9.9e-181 637.1 383 82.8
CDE05G2158 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 1.3e-180 636.7 428 75.9
HPP92_009801 Vanilla planifolia HOM05D002468 ORTHO05D005371 2.2e-180 636.0 423 77.8
Zm00001eb142730 Zea mays HOM05D002468 ORTHO05D005371 2.9e-180 635.6 381 83.2
Aa31LG3G14290 Aethionema arabicum HOM05D002468 ORTHO05D005371 8.3e-180 634.0 489 68.1
SGA_v2.0_scaffold258G45768 Striga asiatica HOM05D002468 ORTHO05D005371 2.4e-179 632.5 446 74.9
unitig_8.g2893 Utricularia gibba HOM05D002468 ORTHO05D005371 1.6e-178 629.8 399 80.7
HanXRQChr06g0175171 Helianthus annuus HOM05D002468 ORTHO05D005371 2.1e-178 629.4 382 82.5
ATR0582G307 Amborella trichopoda HOM05D002468 ORTHO05D005371 8.6e-177 624.0 435 75.6
Nitab4.5_0004349g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 4.7e-175 618.2 440 76.1
CSS0032033 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 4.0e-174 615.1 387 81.7
Actinidia22113 Actinidia chinensis HOM05D002468 ORTHO05D005371 7.1e-171 604.4 380 82.6
BcaB01g05361 Brassica carinata HOM05D002468 ORTHO05D005371 5.1e-169 598.2 441 72.6
Nitab4.5_0002569g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 5.8e-165 584.7 442 72.4
BcaNung01156 Brassica carinata HOM05D002468 ORTHO05D005371 1.5e-160 570.1 392 77.3
Potri.003G161900 Populus trichocarpa HOM05D002468 ORTHO05D005371 1.6e-159 566.6 365 80.5
AagrBONN_evm.TU.Sc2ySwM_228.2334 Anthoceros agrestis HOM05D002468 ORTHO05D005371 4.6e-154 548.5 376 73.4
Lj4g0027400 Lotus japonicus HOM05D002468 ORTHO05D005371 2.8e-151 539.3 379 69.7
Lalb_Chr10g0091121 Lupinus albus HOM05D002468 ORTHO05D005371 1.4e-147 526.9 358 77.7
Lalb_Chr13g0296941 Lupinus albus HOM05D002468 ORTHO05D005371 3.2e-147 525.8 409 64.8
Lj6C840T10 Lonicera japonica HOM05D002468 ORTHO05D005371 5.5e-147 525.0 305 87.9
Glyma.05G199800 Glycine max HOM05D002468 ORTHO05D005371 8.7e-145 517.7 363 69.4
Medtr8g096130 Medicago truncatula HOM05D002468 ORTHO05D005371 2.1e-143 513.1 381 67.7
Mapoly0092s0071 Marchantia polymorpha HOM05D002468 ORTHO05D005371 6.2e-143 511.5 400 65.2
SMO367G1271 Selaginella moellendorffii HOM05D002468 ORTHO05D005371 1.1e-142 510.8 361 72.0
Phvul.002G281000 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 1.4e-142 510.4 362 68.2
TPR.G12900 Trifolium pratense HOM05D002468 ORTHO05D005371 5.3e-142 508.4 420 63.1
Ca_16823_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 1.3e-140 503.8 410 62.4
VMungo0251G2964 Vigna mungo HOM05D002468 ORTHO05D001247 8.4e-140 501.1 362 66.0
Mapoly0092s0072 Marchantia polymorpha HOM05D002468 ORTHO05D005371 2.5e-139 499.6 377 66.6
Mapoly0092s0073 Marchantia polymorpha HOM05D002468 ORTHO05D005371 3.2e-139 499.2 377 66.6
ClCG06G013000 Citrullus lanatus HOM05D002468 ORTHO05D005371 5.7e-136 488.4 396 61.4
Pp3c26_4790 Physcomitrium patens HOM05D002468 ORTHO05D005371 3.7e-135 485.7 361 68.1
MELO3C017506.2 Cucumis melo HOM05D002468 ORTHO05D005371 5.5e-131 471.9 396 60.4
SHI04110 Sapria himalayana HOM05D002468 ORTHO05D005371 4.6e-130 468.8 318 75.8
Cpa.g.sc2215.1 Carica papaya HOM05D002468 ORTHO05D005371 2.2e-127 459.9 359 62.7
CBR_g51451 Chara braunii HOM05D002468 ORTHO05D005371 5.2e-113 412.1 360 60.6
arahy.Tifrunner.gnm1.ann1.93S04R Arachis hypogaea HOM05D002468 ORTHO05D005371 4.7e-98 362.5 369 54.2
Eucgr.H00650 Eucalyptus grandis HOM05D002468 ORTHO05D005371 3.8e-92 342.8 302 59.9
Lj2g0022028 Lotus japonicus HOM05D002468 ORTHO05D005371 3.3e-83 313.2 214 74.3
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 4.9e-71 272.7 186 78.5
Mapoly0189s0003 Marchantia polymorpha HOM05D002468 ORTHO05D005371 8.6e-68 261.9 328 43.6
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 6.0e-61 239.2 139 87.8
arahy.Tifrunner.gnm1.ann1.1XR5VC Arachis hypogaea HOM05D002468 ORTHO05D005371 1.1e-57 228.4 198 58.1
HanXRQChr10g0304361 Helianthus annuus HOM05D002468 ORTHO05D005371 2.4e-57 227.3 125 85.6
Glyma.15G205533 Glycine max HOM05D002468 ORTHO05D005371 2.6e-56 223.8 154 72.7
CsaV3_1G031170 Cucumis sativus L. HOM05D002468 ORTHO05D005371 2.4e-41 174.1 162 57.4
Glyma.08G007300 Glycine max HOM05D002468 ORTHO05D005371 5.5e-38 162.9 119 68.1
BcaB01g05316 Brassica carinata HOM05D000877 ORTHO05D012137 7.9e-37 159.1 111 77.5
BolC3t13237H Brassica oleracea HOM05D000877 ORTHO05D012137 6.2e-34 149.4 81 91.4
SGA_v2.0_scaffold4G02418 Striga asiatica HOM05D002468 ORTHO05D051394 1.8e-28 131.3 98 62.2
Lalb_Chr10g0091111 Lupinus albus HOM05D002468 ORTHO05D005371 2.3e-28 131.0 80 83.8
CsaV3_1G031160 Cucumis sativus L. HOM05D002468 ORTHO05D005371 4.8e-26 123.2 80 71.2
SEGI_31132 Sequoiadendron giganteum HOM05D002468 ORTHO05D005371 4.3e-19 100.1 74 60.8
SGA_v2.0_scaffold528G52739 Striga asiatica HOM05D002468 ORTHO05D051394 1.3e-18 98.6 89 56.2
Pp3c3_15390 Physcomitrium patens HOM05D002468 ORTHO05D005371 1.9e-14 84.7 94 51.1
vmacro08874 Vaccinium macrocarpon HOM05D002468 ORTHO05D013153 5.9e-08 63.2 35 82.9


User provided reference genes

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