Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03068 Aquilegia oxysepala HOM05D001551 ORTHO05D005859 3.0e-156 555.1 264 100.0
TAR629G2635 Trochodendron aralioides HOM05D001551 ORTHO05D005859 1.2e-136 490.0 264 84.1
Thecc.03G141800 Theobroma cacao HOM05D001551 ORTHO05D005859 4.2e-134 481.5 262 82.4
PSO017G1738 Papaver somniferum HOM05D001551 ORTHO05D005859 1.1e-131 473.4 264 82.6
Potri.012G109800 Populus trichocarpa HOM05D001551 ORTHO05D005859 1.5e-131 473.0 258 81.8
Sabra12G0080000 Salix brachista HOM05D001551 ORTHO05D005859 1.5e-131 473.0 261 81.2
Atru.chr6.1937 Acer truncatum HOM05D001551 ORTHO05D005859 3.3e-131 471.9 264 81.4
Gohir.A11G038800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 3.3e-131 471.9 262 80.2
PSO478G5149 Papaver somniferum HOM05D001551 ORTHO05D005859 5.7e-131 471.1 264 82.2
Gohir.D11G042000 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.6e-130 469.5 262 80.2
Manes.14G043800 Manihot esculenta HOM05D001551 ORTHO05D005859 3.7e-130 468.4 264 80.3
COL.COLO4_37269 Corchorus olitorius HOM05D001551 ORTHO05D005859 1.8e-129 466.1 268 79.1
Cpa.g.sc2215.3 Carica papaya HOM05D001551 ORTHO05D005859 3.1e-129 465.3 257 82.1
GSVIVG01008663001 Vitis vinifera HOM05D001551 ORTHO05D005859 4.1e-129 464.9 268 80.2
TAR371G0091 Trochodendron aralioides HOM05D001551 ORTHO05D005859 5.3e-129 464.5 264 81.4
Duzib205G1491 Durio zibethinus HOM05D001551 ORTHO05D005859 9.0e-129 463.8 262 79.8
Hma1.2p1_0577F.1_g182180 Hydrangea macrophylla HOM05D001551 ORTHO05D005859 1.5e-128 463.0 256 83.2
TWI23G1313 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 1.5e-128 463.0 268 79.5
Ciclev10032408m.g Citrus clementina HOM05D001551 ORTHO05D005859 2.0e-128 462.6 271 79.7
Gorai.007G045200 Gossypium raimondii HOM05D001551 ORTHO05D005859 2.6e-128 462.2 263 79.5
Glyma.04G202400 Glycine max HOM05D001551 ORTHO05D005859 3.4e-128 461.8 267 77.5
Phvul.009G160500 Phaseolus vulgaris HOM05D001551 ORTHO05D005859 5.8e-128 461.1 264 76.9
Cc04_g05770 Coffea canephora HOM05D001551 ORTHO05D005859 1.3e-127 459.9 261 81.2
Lj1g0018460 Lotus japonicus HOM05D001551 ORTHO05D005859 2.2e-127 459.1 260 78.5
Lj9C488G12 Lonicera japonica HOM05D001551 ORTHO05D005859 2.9e-127 458.8 266 79.3
QL10p000300 Quercus lobata HOM05D001551 ORTHO05D005859 3.8e-127 458.4 253 80.6
Ca_10874_v3 Cicer arietinum L. HOM05D001551 ORTHO05D005859 6.5e-127 457.6 264 78.8
Glyma.06G163100 Glycine max HOM05D001551 ORTHO05D005859 8.4e-127 457.2 265 77.4
Cfa018920 Carpinus fangiana HOM05D001551 ORTHO05D005859 2.5e-126 455.7 264 79.9
Solyc06g068760.3 Solanum lycopersicum HOM05D001551 ORTHO05D005859 2.5e-126 455.7 262 79.0
Gohir.A03G055800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 3.2e-126 455.3 264 79.2
MSTRG.22814 Avicennia marina HOM05D001551 ORTHO05D005859 4.2e-126 454.9 262 80.2
CSS0002484 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 7.2e-126 454.1 263 79.1
Rhsim12G0181300 Rhododendron simsii HOM05D001551 ORTHO05D005859 7.2e-126 454.1 269 77.3
SalBow7G1162 Salvia bowleyana HOM05D001551 ORTHO05D005859 7.2e-126 454.1 267 79.4
Prupe.5G140300 Prunus persica HOM05D001551 ORTHO05D005859 2.1e-125 452.6 263 77.6
CSS0038575 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 2.7e-125 452.2 262 79.4
Manes.06G127400 Manihot esculenta HOM05D001551 ORTHO05D005859 2.7e-125 452.2 264 79.2
Sopen06g026040 Solanum pennellii HOM05D001551 ORTHO05D005859 6.1e-125 451.1 263 78.7
Lalb_Chr08g0237601 Lupinus albus HOM05D001551 ORTHO05D005859 1.0e-124 450.3 265 76.6
Cfa018698 Carpinus fangiana HOM05D001551 ORTHO05D005859 1.3e-124 449.9 264 78.8
MELO3C002387.2 Cucumis melo HOM05D001551 ORTHO05D005859 1.3e-124 449.9 266 77.1
MD06G1129000 Malus domestica HOM05D001551 ORTHO05D005859 2.3e-124 449.1 263 77.2
Gorai.003G117100 Gossypium raimondii HOM05D001551 ORTHO05D005859 3.0e-124 448.7 263 78.3
PGSC0003DMG400025575 Solanum tuberosum HOM05D001551 ORTHO05D005859 3.0e-124 448.7 263 78.3
CsaV3_1G009930 Cucumis sativus L. HOM05D001551 ORTHO05D005859 5.1e-124 448.0 266 76.7
Migut.I00664 Erythranthe guttata HOM05D001551 ORTHO05D005859 6.7e-124 447.6 258 80.2
Lsat_1_v5_gn_5_9381 Lactuca sativa HOM05D001551 ORTHO05D005859 6.7e-124 447.6 265 78.5
MD14G1145900 Malus domestica HOM05D001551 ORTHO05D005859 1.5e-123 446.4 263 76.4
Psat5g055440 Pisum sativum HOM05D001551 ORTHO05D005859 1.5e-123 446.4 264 76.1
RcHm_v2.0_Chr7g0188531 Rosa chinensis HOM05D001551 ORTHO05D005859 1.9e-123 446.0 260 77.3
A01p16340 Brassica napus HOM05D001551 ORTHO05D005859 4.3e-123 444.9 263 76.8
CiPaw.12G000400 Carya illinoinensis HOM05D001551 ORTHO05D005859 4.3e-123 444.9 253 78.7
arahy.Tifrunner.gnm1.ann1.D8JD58 Arachis hypogaea HOM05D001551 ORTHO05D005859 5.7e-123 444.5 264 75.8
arahy.Tifrunner.gnm1.ann1.Q2CTBB Arachis hypogaea HOM05D001551 ORTHO05D005859 5.7e-123 444.5 264 75.8
CAN.G1089.16 Capsicum annuum HOM05D001551 ORTHO05D005859 9.7e-123 443.7 263 77.2
vmacro16761 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 1.3e-122 443.4 274 77.0
C01p20490 Brassica napus HOM05D001551 ORTHO05D005859 1.6e-122 443.0 263 76.4
Medtr3g098510 Medicago truncatula HOM05D001551 ORTHO05D005859 1.6e-122 443.0 262 74.8
BcaC09g50811 Brassica carinata HOM05D001551 ORTHO05D005859 2.2e-122 442.6 262 76.3
BraA01t01589Z Brassica rapa HOM05D001551 ORTHO05D005859 2.2e-122 442.6 263 76.0
THA.LOC104808046 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 4.8e-122 441.4 256 79.3
Aa31LG3G7480 Aethionema arabicum HOM05D001551 ORTHO05D005859 6.3e-122 441.0 261 76.6
CDE02G1325 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 8.2e-122 440.7 261 77.0
BcaNung03998 Brassica carinata HOM05D001551 ORTHO05D005859 1.8e-121 439.5 272 74.6
Actinidia36846 Actinidia chinensis HOM05D001551 ORTHO05D005859 2.4e-121 439.1 265 77.7
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 3.1e-121 438.7 257 79.0
Sed0027340 Sechium edule HOM05D001551 ORTHO05D005859 3.1e-121 438.7 275 74.2
HanXRQChr05g0155371 Helianthus annuus HOM05D001551 ORTHO05D005859 4.1e-121 438.3 263 78.3
BolC1t01980H Brassica oleracea HOM05D001551 ORTHO05D005859 5.3e-121 438.0 263 75.7
Nitab4.5_0007345g0100 Nicotiana tabacum HOM05D001551 ORTHO05D005859 9.0e-121 437.2 263 76.8
FAN04G0171 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.2e-120 436.8 252 78.2
Actinidia08913 Actinidia chinensis HOM05D001551 ORTHO05D005859 1.5e-120 436.4 267 75.7
FvH4_5g09710 Fragaria vesca HOM05D001551 ORTHO05D005859 2.6e-120 435.6 252 77.8
FAN08G3006 Fragaria x ananassa HOM05D001551 ORTHO05D005859 2.6e-120 435.6 257 76.7
AT5G51020 Arabidopsis thaliana HOM05D001551 ORTHO05D005859 5.9e-120 434.5 261 75.9
Nitab4.5_0012775g0030 Nicotiana tabacum HOM05D001551 ORTHO05D005859 5.9e-120 434.5 263 76.0
FAN13G0525 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.0e-119 433.7 257 76.3
FAN18G2118 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.3e-119 433.3 252 77.4
AL8G25230 Arabidopsis lyrata HOM05D001551 ORTHO05D005859 1.7e-119 433.0 261 75.5
unitig_27.g25103 Utricularia gibba HOM05D001551 ORTHO05D005859 2.9e-119 432.2 263 75.3
PGR044G0460 Punica granatum HOM05D001551 ORTHO05D005859 5.0e-119 431.4 261 75.9
Carub.0008s1102 Capsella rubella HOM05D001551 ORTHO05D005859 1.1e-118 430.3 261 75.5
Sc04g0000180 Simmondsia chinensis HOM05D001551 ORTHO05D005859 1.9e-118 429.5 277 71.8
CARHR257170 Cardamine hirsuta HOM05D001551 ORTHO05D005859 3.2e-118 428.7 261 75.1
Eucgr.K02189 Eucalyptus grandis HOM05D001551 ORTHO05D005859 1.2e-117 426.8 265 73.2
Gohir.D03G110700 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.2e-117 426.8 234 82.5
Sp6g13170 Schrenkiella parvula HOM05D001551 ORTHO05D005859 1.6e-117 426.4 261 73.6
EL10Ac5g11272 Beta vulgaris HOM05D001551 ORTHO05D005859 1.0e-116 423.7 262 73.3
BraA03t10931Z Brassica rapa HOM05D001551 ORTHO05D005859 1.0e-116 423.7 260 73.5
SGA_v2.0_scaffold5G02806 Striga asiatica HOM05D001551 ORTHO05D005859 2.5e-115 419.1 266 75.2
Sp7g23070 Schrenkiella parvula HOM05D001551 ORTHO05D005859 9.7e-115 417.2 263 72.6
AUR62043378 Chenopodium quinoa HOM05D001551 ORTHO05D005859 1.7e-114 416.4 282 69.5
TWI39G0428 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 1.7e-114 416.4 269 73.2
Oeu051186.2 Olea europaea HOM05D001551 ORTHO05D005859 3.7e-114 415.2 282 69.5
Rhsim08G0198700 Rhododendron simsii HOM05D001551 ORTHO05D005859 3.7e-114 415.2 250 76.0
AUR62032208 Chenopodium quinoa HOM05D001551 ORTHO05D005859 8.2e-114 414.1 280 69.3
Sed0019000 Sechium edule HOM05D001551 ORTHO05D005859 1.1e-113 413.7 269 72.1
Hund10026 Selenicereus undatus HOM05D001551 ORTHO05D005859 6.9e-113 411.0 256 71.9
A03p16410 Brassica napus HOM05D001551 ORTHO05D005859 3.4e-112 408.7 285 67.0
DCAR_025640 Daucus carota HOM05D001551 ORTHO05D005859 2.9e-111 405.6 264 72.3
THA.LOC104811554 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 1.4e-110 403.3 239 74.5
vmacro19115 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 7.2e-110 401.0 228 77.6
MBI07_g13940_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 3.6e-109 398.7 297 67.3
SGA_v2.0_scaffold37G14673 Striga asiatica HOM05D001551 ORTHO05D005859 3.6e-109 398.7 219 84.0
Peaxi162Scf00207g00254 Petunia axillaris HOM05D001551 ORTHO05D005859 1.0e-108 397.1 270 70.7
Os11g0524300 Oryza sativa ssp. japonica HOM05D001551 ORTHO05D005859 2.3e-108 396.0 231 74.5
BcaC01g06112 Brassica carinata HOM05D001551 ORTHO05D005859 6.7e-108 394.4 264 70.8
ClCG03G004050 Citrullus lanatus HOM05D001551 ORTHO05D005859 5.7e-107 391.3 235 77.0
Zm00001eb170550 Zea mays HOM05D001551 ORTHO05D005859 4.8e-106 388.3 231 74.5
Thhalv10014437m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 5.9e-104 381.3 222 78.8
Dinv13710 Davidia involucrata HOM05D001551 ORTHO05D005859 7.7e-104 380.9 210 82.4
Mapoly0002s0145 Marchantia polymorpha HOM05D001551 ORTHO05D005859 3.2e-102 375.6 251 68.1
Actinidia18288 Actinidia chinensis HOM05D001551 ORTHO05D005859 4.7e-101 371.7 212 79.2
AagrBONN_evm.TU.Sc2ySwM_368.1985 Anthoceros agrestis HOM05D001551 ORTHO05D005859 4.7e-101 371.7 227 70.9
Pp3c5_10130 Physcomitrium patens HOM05D001551 ORTHO05D005859 4.0e-100 368.6 243 67.1
Pp3c6_23000 Physcomitrium patens HOM05D001551 ORTHO05D005859 1.7e-98 363.2 218 71.6
SMO118G0459 Selaginella moellendorffii HOM05D001551 ORTHO05D005859 3.7e-98 362.1 224 70.1
Nn4g22121 Nelumbo nucifera HOM05D001551 ORTHO05D005859 1.1e-97 360.5 264 65.2
Actinidia25511 Actinidia chinensis HOM05D001551 ORTHO05D005859 2.0e-91 339.7 250 66.0
AUR62011939 Chenopodium quinoa HOM05D001551 ORTHO05D005859 2.6e-91 339.3 299 57.2
TPR.G16934 Trifolium pratense HOM05D001551 ORTHO05D005859 6.3e-90 334.7 193 76.2
Haze_07088 Corylus avellana HOM05D001551 ORTHO05D005859 1.4e-89 333.6 231 68.0
Nn3g16260 Nelumbo nucifera HOM05D001551 ORTHO05D005859 2.9e-87 325.9 164 87.2
AUR62043863 Chenopodium quinoa HOM05D001551 ORTHO05D005859 4.2e-86 322.0 329 51.1
Hund02515 Selenicereus undatus HOM05D001551 ORTHO05D005859 4.0e-84 315.5 282 56.4
CBR_g30803 Chara braunii HOM05D001551 ORTHO05D005859 1.2e-83 313.9 215 62.3
SEGI_34423 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 1.7e-82 310.1 198 68.2
Dinv23235 Davidia involucrata HOM05D001551 ORTHO05D005859 9.2e-81 304.3 181 78.5
Duzib084G0881 Durio zibethinus HOM05D001551 ORTHO05D005859 6.4e-74 281.6 162 76.5
Thhalv10025970m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 2.0e-67 260.0 156 77.6
MBI07_g35983_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 1.2e-64 250.8 163 73.6
HPP92_009738 Vanilla planifolia HOM05D001551 ORTHO05D005859 1.3e-63 247.3 219 58.9
MBI07_g48061_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 1.9e-62 243.4 138 79.7
CDE06G0746 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 3.3e-62 242.7 215 59.5
Sc04g0000130 Simmondsia chinensis HOM05D001551 ORTHO05D005859 3.4e-51 206.1 120 77.5
Sc04g0000140 Simmondsia chinensis HOM05D001551 ORTHO05D005859 3.2e-49 199.5 122 73.0
CSS0038626 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 6.0e-32 142.1 107 64.5
CSS0016811 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 1.1e-25 121.3 77 76.6
Psat3g122800 Pisum sativum HOM05D001551 ORTHO05D005859 1.1e-25 121.3 81 67.9
FvH4_6g04500 Fragaria vesca HOM05D001551 ORTHO05D005859 2.7e-24 116.7 72 73.6
SEGI_13041 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 6.0e-24 115.5 66 69.7
Pp3c16_270 Physcomitrium patens HOM05D001551 ORTHO05D005859 1.3e-23 114.4 66 74.2
ECA246G1749 Erigeron canadensis HOM05D001551 ORTHO05D005859 3.0e-23 113.2 65 78.5
Psat7g261640 Pisum sativum HOM05D001551 ORTHO05D005859 5.6e-22 109.0 94 60.6
HanXRQChr05g0130591 Helianthus annuus HOM05D001551 ORTHO05D005859 2.9e-18 96.7 52 82.7
Cfa013473 Carpinus fangiana HOM05D001551 ORTHO05D005859 6.5e-18 95.5 71 69.0
C03p19300 Brassica napus HOM05D001551 ORTHO05D042173 2.3e-15 87.0 72 58.3
BcaC01g06064 Brassica carinata HOM05D001551 ORTHO05D005859 8.7e-15 85.1 86 55.8
Sabra15G0128500 Salix brachista HOM05D001551 ORTHO05D003058 2.5e-14 83.6 84 48.8
Duzib084G0670 Durio zibethinus HOM05D001551 ORTHO05D005859 9.6e-14 81.6 53 67.9
Ah.11g046990 Amaranthus hybridus HOM05D001551 ORTHO05D005859 1.0e-10 71.6 53 58.5
SEGI_34327 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 2.9e-10 70.1 67 53.7
Psat5g306440 Pisum sativum HOM05D001551 ORTHO05D006558 5.0e-10 69.3 51 64.7
Ah.02g114530 Amaranthus hybridus HOM05D001551 ORTHO05D005859 1.1e-09 68.2 52 57.7
BolC3t14316H Brassica oleracea HOM05D001551 ORTHO05D042173 7.9e-08 62.0 51 56.9


User provided reference genes

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