Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02899 Aquilegia oxysepala HOM05D004173 ORTHO05D004885 2.1e-160 568.9 272 100.0
TAR365G1150 Trochodendron aralioides HOM05D004173 ORTHO05D004885 3.5e-51 206.1 276 45.3
TAR365G0355 Trochodendron aralioides HOM05D004173 ORTHO05D004885 1.3e-50 204.1 276 44.9
PSO478G3294 Papaver somniferum HOM05D004173 ORTHO05D004885 9.2e-44 181.4 290 38.3
MBI18_g38876_MAGBIO Magnolia biondii HOM05D004173 ORTHO05D004885 2.1e-43 180.3 172 52.3
PSO675G3687 Papaver somniferum HOM05D004173 ORTHO05D004885 6.0e-43 178.7 313 36.7
PSO063G2850 Papaver somniferum HOM05D004173 ORTHO05D004885 7.8e-43 178.3 295 36.6
PSO421G0661 Papaver somniferum HOM05D004173 ORTHO05D004885 1.0e-42 177.9 316 38.3
PSO266G0063 Papaver somniferum HOM05D004173 ORTHO05D004885 2.3e-42 176.8 294 37.1
PSO104G0082 Papaver somniferum HOM05D004173 ORTHO05D004885 8.6e-42 174.9 180 50.6
Nn2g10306 Nelumbo nucifera HOM05D004173 ORTHO05D004885 3.4e-38 162.9 233 39.5
Nn5g26849 Nelumbo nucifera HOM05D004173 ORTHO05D004885 9.9e-38 161.4 234 41.5
HPP92_012755 Vanilla planifolia HOM05D004173 ORTHO05D004885 1.7e-37 160.6 192 41.7
CSS0041127 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 2.2e-37 160.2 193 42.0
CSS0049649 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 2.2e-37 160.2 193 42.0
Zm00001eb056440 Zea mays HOM05D004173 ORTHO05D004885 5.4e-36 155.6 167 48.5
Zm00001eb215400 Zea mays HOM05D004173 ORTHO05D004885 9.2e-36 154.8 174 43.1
MSTRG.18054 Avicennia marina HOM05D004173 ORTHO05D004885 1.7e-34 150.6 202 38.1
Oeu025786.2 Olea europaea HOM05D004173 ORTHO05D004885 2.5e-33 146.7 172 43.6
Cc10_g16360 Coffea canephora HOM05D004173 ORTHO05D004885 8.1e-32 141.7 161 43.5
ATR0776G079 Amborella trichopoda HOM05D004173 ORTHO05D004885 4.0e-31 139.4 187 41.7
ATR0124G034 Amborella trichopoda HOM05D004173 ORTHO05D004885 6.9e-31 138.7 176 43.8
Os03g0736900 Oryza sativa ssp. japonica HOM05D004173 ORTHO05D004885 9.9e-30 134.8 158 43.0
Thecc.10G181100 Theobroma cacao HOM05D004173 ORTHO05D004885 1.3e-29 134.4 195 39.0
Duzib114G0418 Durio zibethinus HOM05D004173 ORTHO05D004885 1.1e-28 131.3 184 39.1
Gohir.D05G280200 Gossypium hirsutum HOM05D004173 ORTHO05D004885 1.4e-28 131.0 166 44.0
CDE02G3998 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 1.9e-28 130.6 173 39.3
Gohir.A05G278500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 3.2e-28 129.8 166 43.4
Thhalv10006215m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 4.2e-28 129.4 178 42.7
RcHm_v2.0_Chr1g0372231 Rosa chinensis HOM05D004173 ORTHO05D004885 5.4e-28 129.0 171 41.5
Ciclev10032642m.g Citrus clementina HOM05D004173 ORTHO05D004885 7.1e-28 128.6 186 38.7
FAN03G3439 Fragaria x ananassa HOM05D004173 ORTHO05D004885 9.3e-28 128.3 171 40.9
FAN10G3668 Fragaria x ananassa HOM05D004173 ORTHO05D004885 2.1e-27 127.1 171 40.4
Lalb_Chr23g0272221 Lupinus albus HOM05D004173 ORTHO05D004885 2.1e-27 127.1 277 33.2
Sp5g06150 Schrenkiella parvula HOM05D004173 ORTHO05D004885 2.7e-27 126.7 187 41.7
Dinv34482 Davidia involucrata HOM05D004173 ORTHO05D004885 3.5e-27 126.3 264 31.8
Eucgr.J00114 Eucalyptus grandis HOM05D004173 ORTHO05D004885 3.5e-27 126.3 199 38.7
FvH4_7g25910 Fragaria vesca HOM05D004173 ORTHO05D004885 3.5e-27 126.3 171 40.4
FAN06G1323 Fragaria x ananassa HOM05D004173 ORTHO05D004885 3.5e-27 126.3 171 40.4
CARHR166510 Cardamine hirsuta HOM05D004173 ORTHO05D004885 4.6e-27 125.9 195 40.0
Gorai.009G293700 Gossypium raimondii HOM05D004173 ORTHO05D004885 4.6e-27 125.9 166 41.0
vmacro09960 Vaccinium macrocarpon HOM05D004173 ORTHO05D004885 4.6e-27 125.9 176 39.2
Hma1.2p1_0264F.1_g106180 Hydrangea macrophylla HOM05D004173 ORTHO05D004885 6.0e-27 125.6 176 39.8
Prupe.2G264000 Prunus persica HOM05D004173 ORTHO05D004885 6.0e-27 125.6 172 40.7
Duzib128G1795 Durio zibethinus HOM05D004173 ORTHO05D004885 7.8e-27 125.2 176 38.6
Oeu063983.1 Olea europaea HOM05D004173 ORTHO05D004885 1.3e-26 124.4 178 37.1
Nitab4.5_0002279g0040 Nicotiana tabacum HOM05D004173 ORTHO05D004885 1.7e-26 124.0 186 34.9
Ca_16866_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 2.3e-26 123.6 169 43.2
Ca_29953_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 2.3e-26 123.6 169 43.2
Aa31LG10G11250 Aethionema arabicum HOM05D004173 ORTHO05D004885 3.0e-26 123.2 170 43.5
MD01G1167600 Malus domestica HOM05D004173 ORTHO05D004885 3.9e-26 122.9 172 41.9
CSS0045557 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 5.1e-26 122.5 175 41.7
Cpa.g.sc19.59 Carica papaya HOM05D004173 ORTHO05D004885 6.6e-26 122.1 198 37.4
Potri.019G058000 Populus trichocarpa HOM05D004173 ORTHO05D004885 6.6e-26 122.1 175 38.9
Medtr3g093970 Medicago truncatula HOM05D004173 ORTHO05D004885 8.7e-26 121.7 169 41.4
Rhsim09G0185800 Rhododendron simsii HOM05D004173 ORTHO05D004885 1.9e-25 120.6 173 38.7
SEGI_33270 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 1.9e-25 120.6 166 39.8
C09p71450 Brassica napus HOM05D004173 ORTHO05D004885 2.5e-25 120.2 171 39.8
BolC9t59908H Brassica oleracea HOM05D004173 ORTHO05D004885 2.5e-25 120.2 171 39.8
THA.LOC104813511 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 2.5e-25 120.2 181 40.3
AL5G37690 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 3.3e-25 119.8 178 41.0
SEGI_03811 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 3.3e-25 119.8 166 39.8
MELO3C020007.2 Cucumis melo HOM05D004173 ORTHO05D004885 4.3e-25 119.4 266 30.8
Lalb_Chr23g0272201 Lupinus albus HOM05D004173 ORTHO05D004885 4.3e-25 119.4 167 38.9
Ah.12g064380 Amaranthus hybridus HOM05D004173 ORTHO05D004885 5.6e-25 119.0 175 39.4
A10p30940 Brassica napus HOM05D004173 ORTHO05D004885 5.6e-25 119.0 171 40.4
BolC8t50789H Brassica oleracea HOM05D004173 ORTHO05D004885 5.6e-25 119.0 177 42.9
BraA10t45139Z Brassica rapa HOM05D004173 ORTHO05D004885 5.6e-25 119.0 171 40.4
Atru.chr12.182 Acer truncatum HOM05D004173 ORTHO05D004885 1.3e-24 117.9 167 40.1
TPR.G1732 Trifolium pratense HOM05D004173 ORTHO05D004885 1.3e-24 117.9 169 39.1
Migut.F00606 Erythranthe guttata HOM05D004173 ORTHO05D004885 1.6e-24 117.5 168 38.1
Phvul.009G044100 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 2.1e-24 117.1 169 39.1
Psat5g068840 Pisum sativum HOM05D004173 ORTHO05D004885 2.1e-24 117.1 169 37.3
Sp6g37580 Schrenkiella parvula HOM05D004173 ORTHO05D004885 2.1e-24 117.1 173 38.7
VMungo1309G0457 Vigna mungo HOM05D004173 ORTHO05D004885 2.1e-24 117.1 169 38.5
BcaC07g39948 Brassica carinata HOM05D004173 ORTHO05D004885 3.6e-24 116.3 177 40.7
A09p49310 Brassica napus HOM05D004173 ORTHO05D004885 3.6e-24 116.3 177 40.7
C08p31680 Brassica napus HOM05D004173 ORTHO05D004885 3.6e-24 116.3 177 40.7
BraA09t40385Z Brassica rapa HOM05D004173 ORTHO05D004885 3.6e-24 116.3 177 40.7
Glyma.06G142900 Glycine max HOM05D004173 ORTHO05D004885 4.8e-24 115.9 169 37.9
Sc05g0006880 Simmondsia chinensis HOM05D004173 ORTHO05D004885 4.8e-24 115.9 150 40.0
Glyma.04G222500 Glycine max HOM05D004173 ORTHO05D004885 6.2e-24 115.5 169 37.3
THA.LOC104824365 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 6.2e-24 115.5 181 40.9
BolC4t25192H Brassica oleracea HOM05D004173 ORTHO05D004885 8.1e-24 115.2 176 40.3
AUR62024933 Chenopodium quinoa HOM05D004173 ORTHO05D004885 8.1e-24 115.2 167 38.9
Nitab4.5_0000171g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 8.1e-24 115.2 178 33.7
Carub.0005s2314 Capsella rubella HOM05D004173 ORTHO05D004885 1.1e-23 114.8 178 41.0
Ah.14g087000 Amaranthus hybridus HOM05D004173 ORTHO05D004885 1.4e-23 114.4 195 33.8
arahy.Tifrunner.gnm1.ann1.7F477P Arachis hypogaea HOM05D004173 ORTHO05D004885 1.4e-23 114.4 169 38.5
CAN.G24.14 Capsicum annuum HOM05D004173 ORTHO05D004885 1.4e-23 114.4 166 36.1
Manes.07G143600 Manihot esculenta HOM05D004173 ORTHO05D004885 1.4e-23 114.4 166 40.4
Sopen05g030770 Solanum pennellii HOM05D004173 ORTHO05D004885 1.4e-23 114.4 179 35.2
Actinidia00999 Actinidia chinensis HOM05D004173 ORTHO05D004885 1.8e-23 114.0 175 40.0
AT3G56360 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 1.8e-23 114.0 168 41.7
BcaC02g09832 Brassica carinata HOM05D004173 ORTHO05D004885 1.8e-23 114.0 176 39.8
C04p36060 Brassica napus HOM05D004173 ORTHO05D004885 1.8e-23 114.0 176 39.8
Manes.10G001300 Manihot esculenta HOM05D004173 ORTHO05D004885 2.4e-23 113.6 166 39.8
THA.LOC104803208 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 2.4e-23 113.6 172 39.0
Cfa001210 Carpinus fangiana HOM05D004173 ORTHO05D004885 3.1e-23 113.2 171 36.8
CsaV3_6G002310 Cucumis sativus L. HOM05D004173 ORTHO05D004885 3.1e-23 113.2 196 34.2
Lj1g0005357 Lotus japonicus HOM05D004173 ORTHO05D004885 3.1e-23 113.2 169 38.5
QL08p064831 Quercus lobata HOM05D004173 ORTHO05D004885 3.1e-23 113.2 180 37.8
PGSC0003DMG400016638 Solanum tuberosum HOM05D004173 ORTHO05D004885 3.1e-23 113.2 165 36.4
BcaB02g08372 Brassica carinata HOM05D004173 ORTHO05D004885 4.0e-23 112.8 176 40.9
BcaC07g39950 Brassica carinata HOM05D004173 ORTHO05D004885 4.0e-23 112.8 176 40.3
A04p03290 Brassica napus HOM05D004173 ORTHO05D004885 4.0e-23 112.8 176 39.8
BraA04t16106Z Brassica rapa HOM05D004173 ORTHO05D004885 4.0e-23 112.8 176 39.8
DCAR_014665 Daucus carota HOM05D004173 ORTHO05D004885 5.3e-23 112.5 189 34.9
MD07G1233600 Malus domestica HOM05D004173 ORTHO05D004885 5.3e-23 112.5 172 37.2
Sc10g0002990 Simmondsia chinensis HOM05D004173 ORTHO05D004885 5.3e-23 112.5 166 37.3
Manes.07G141000 Manihot esculenta HOM05D004173 ORTHO05D004885 6.9e-23 112.1 166 40.4
Solyc06g049020.1 Solanum lycopersicum HOM05D004173 ORTHO05D004885 6.9e-23 112.1 214 32.2
Sopen06g015380 Solanum pennellii HOM05D004173 ORTHO05D004885 9.0e-23 111.7 177 35.6
CAN.G203.54 Capsicum annuum HOM05D004173 ORTHO05D004885 1.2e-22 111.3 179 33.0
AL6G15090 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 1.5e-22 110.9 173 38.7
AT5G05250 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 1.5e-22 110.9 171 39.2
CARHR207980 Cardamine hirsuta HOM05D004173 ORTHO05D004885 1.5e-22 110.9 169 39.1
TWI73G0681 Tripterygium wilfordii HOM05D004173 ORTHO05D004885 1.5e-22 110.9 204 34.8
Carub.0006s0418 Capsella rubella HOM05D004173 ORTHO05D004885 2.0e-22 110.5 171 39.2
Thhalv10014558m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 2.0e-22 110.5 174 38.5
CAN.G100.76 Capsicum annuum HOM05D004173 ORTHO05D004885 2.6e-22 110.2 167 36.5
PGSC0003DMG400011642 Solanum tuberosum HOM05D004173 ORTHO05D004885 2.6e-22 110.2 174 35.1
Peaxi162Scf00739g00035 Petunia axillaris HOM05D004173 ORTHO05D004885 5.8e-22 109.0 166 36.7
CANSAT25G2618 Cannabis sativa HOM05D004173 ORTHO05D004885 7.6e-22 108.6 183 37.2
HanXRQChr08g0221561 Helianthus annuus HOM05D004173 ORTHO05D004885 9.9e-22 108.2 167 40.7
Pp3c2_14400 Physcomitrium patens HOM05D004173 ORTHO05D004885 9.9e-22 108.2 166 40.4
CDE04G1376 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 1.3e-21 107.8 162 40.1
AUR62030611 Chenopodium quinoa HOM05D004173 ORTHO05D004885 1.3e-21 107.8 177 37.3
Sed0028126 Sechium edule HOM05D004173 ORTHO05D004885 4.9e-21 105.9 177 32.8
Peaxi162Scf00739g00036 Petunia axillaris HOM05D004173 ORTHO05D004885 6.4e-21 105.5 166 34.9
BcaC06g32235 Brassica carinata HOM05D004173 ORTHO05D004885 1.9e-20 104.0 168 36.9
SalBow3G3840 Salvia bowleyana HOM05D004173 ORTHO05D004885 4.2e-20 102.8 165 36.4
Peaxi162Scf00167g01213 Petunia axillaris HOM05D004173 ORTHO05D004885 5.4e-20 102.4 149 38.9
CiPaw.01G306500 Carya illinoinensis HOM05D004173 ORTHO05D004885 7.1e-20 102.1 160 36.2
Lsat_1_v5_gn_8_11461 Lactuca sativa HOM05D004173 ORTHO05D004885 7.1e-20 102.1 167 41.3
SGA_v2.0_scaffold60G20889 Striga asiatica HOM05D004173 ORTHO05D004885 9.3e-20 101.7 201 33.8
Aa31LG11G6110 Aethionema arabicum HOM05D004173 ORTHO05D004885 1.6e-19 100.9 181 35.9
Lsat_1_v5_gn_9_60020 Lactuca sativa HOM05D004173 ORTHO05D004885 1.6e-19 100.9 182 40.1
Gohir.A05G403100 Gossypium hirsutum HOM05D004173 ORTHO05D004885 2.1e-19 100.5 144 40.3
ClCG11G005670 Citrullus lanatus HOM05D004173 ORTHO05D004885 3.5e-19 99.8 247 29.1
PGR044G2104 Punica granatum HOM05D004173 ORTHO05D004885 7.9e-19 98.6 175 33.7
Gohir.D04G012400 Gossypium hirsutum HOM05D004173 ORTHO05D004885 1.0e-18 98.2 144 39.6
Pp3c14_17300 Physcomitrium patens HOM05D004173 ORTHO05D004885 1.0e-18 98.2 164 34.1
Haze_17356 Corylus avellana HOM05D004173 ORTHO05D004885 1.8e-18 97.4 168 35.1
ECA238G3313 Erigeron canadensis HOM05D004173 ORTHO05D004885 1.8e-18 97.4 170 36.5
Gorai.012G014700 Gossypium raimondii HOM05D004173 ORTHO05D004885 1.1e-17 94.7 144 38.9
Lsat_1_v5_gn_2_126200 Lactuca sativa HOM05D004173 ORTHO05D004885 1.1e-17 94.7 181 37.0
Gohir.A13G006500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 4.3e-17 92.8 187 32.1
Dinv21845 Davidia involucrata HOM05D004173 ORTHO05D004885 9.6e-17 91.7 235 30.2
Gorai.013G006900 Gossypium raimondii HOM05D004173 ORTHO05D004885 1.3e-16 91.3 192 31.2
Gohir.D13G006700 Gossypium hirsutum HOM05D004173 ORTHO05D004885 1.6e-16 90.9 192 31.2
THA.LOC104826832 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 3.6e-16 89.7 180 33.3
HanXRQChr09g0252211 Helianthus annuus HOM05D004173 ORTHO05D004885 6.2e-16 89.0 168 35.1
Dinv05055 Davidia involucrata HOM05D004173 ORTHO05D004885 4.0e-15 86.3 78 52.6
EL10Ac2g02643 Beta vulgaris HOM05D004173 ORTHO05D004885 1.2e-14 84.7 142 35.9
Mapoly0082s0027 Marchantia polymorpha HOM05D004173 ORTHO05D004885 7.6e-14 82.0 157 35.0
Rhsim10G0215400 Rhododendron simsii HOM05D000820 ORTHO05D016785 7.6e-14 82.0 84 50.0
unitig_37.g11910 Utricularia gibba HOM05D004173 ORTHO05D004885 7.1e-12 75.5 166 27.7
CBR_g24287 Chara braunii HOM05D004173 ORTHO05D004885 1.3e-10 71.2 224 23.7
Pp3c10_16350 Physcomitrium patens HOM05D004173 ORTHO05D004885 1.5e-09 67.8 144 30.6
Nitab4.5_0002846g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 1.3e-08 64.7 128 28.9
Nitab4.5_0000375g0240 Nicotiana tabacum HOM05D004173 ORTHO05D004885 3.7e-08 63.2 91 35.2
Actinidia07794 Actinidia chinensis HOM05D004173 ORTHO05D004885 2.4e-07 60.5 89 39.3
CAN.G546.44 Capsicum annuum HOM05D004173 ORTHO05D004885 1.5e-06 57.8 112 26.8
Phvul.009G044000 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 1.5e-06 57.8 61 45.9


User provided reference genes

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