Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 3.8e-82 308.1 160 100.0
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 5.2e-47 191.4 144 66.0
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 5.2e-47 191.4 152 65.8
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 2.6e-46 189.1 151 64.2
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 9.9e-46 187.2 142 67.6
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 1.3e-45 186.8 152 63.8
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 4.2e-44 181.8 137 63.5
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 7.8e-43 177.6 139 65.5
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 7.8e-43 177.6 153 62.1
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 1.3e-42 176.8 139 62.6
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 3.0e-42 175.6 139 64.7
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 3.9e-42 175.3 151 63.6
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 8.7e-42 174.1 148 60.8
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 4.7e-40 168.3 135 63.0
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 4.7e-40 168.3 138 60.9
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.1e-39 167.2 147 61.2
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 1.8e-39 166.4 139 60.4
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 3.1e-39 165.6 148 59.5
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 5.3e-39 164.9 138 63.8
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 9.0e-39 164.1 140 56.4
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 2.6e-38 162.5 137 58.4
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 3.4e-38 162.2 134 61.2
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 3.4e-38 162.2 140 56.4
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 4.4e-38 161.8 138 60.9
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 4.4e-38 161.8 138 56.5
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 5.8e-38 161.4 145 56.6
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 7.6e-38 161.0 141 58.9
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 9.9e-38 160.6 147 54.4
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 9.9e-38 160.6 137 61.3
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 1.7e-37 159.8 141 58.9
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.2e-37 159.5 151 55.6
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 2.2e-37 159.5 139 59.7
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.9e-37 159.1 145 57.2
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 4.9e-37 158.3 139 59.7
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 4.9e-37 158.3 139 59.7
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 4.9e-37 158.3 138 59.4
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 6.4e-37 157.9 147 55.1
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 6.4e-37 157.9 139 58.3
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 8.4e-37 157.5 135 60.7
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 1.4e-36 156.8 146 56.2
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.9e-36 156.4 145 56.6
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 2.4e-36 156.0 137 59.1
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 3.2e-36 155.6 139 57.6
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 7.1e-36 154.5 145 54.5
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 9.3e-36 154.1 156 52.6
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 9.3e-36 154.1 139 55.4
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 9.3e-36 154.1 128 59.4
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 1.2e-35 153.7 138 55.1
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.6e-35 153.3 139 56.8
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 1.6e-35 153.3 139 56.8
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.7e-35 152.5 141 56.7
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 2.7e-35 152.5 149 55.7
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 3.5e-35 152.1 140 56.4
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 4.6e-35 151.8 139 56.1
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 6.0e-35 151.4 143 53.8
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 6.0e-35 151.4 128 57.8
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 1.0e-34 150.6 136 58.1
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 1.3e-34 150.2 124 62.1
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 1.7e-34 149.8 144 54.2
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 2.3e-34 149.4 138 57.2
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 3.0e-34 149.1 143 53.1
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 3.0e-34 149.1 139 54.0
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 3.9e-34 148.7 140 55.7
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 3.9e-34 148.7 137 56.9
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 5.1e-34 148.3 139 54.0
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 8.7e-34 147.5 142 57.7
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 8.7e-34 147.5 145 51.0
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 1.5e-33 146.7 138 55.8
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 1.5e-33 146.7 142 56.3
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 3.3e-33 145.6 140 54.3
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 9.6e-33 144.1 164 48.8
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 1.3e-32 143.7 142 55.6
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 2.1e-32 142.9 138 50.0
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 2.1e-32 142.9 138 50.7
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 3.6e-32 142.1 140 52.1
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 3.6e-32 142.1 116 62.9
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 1.4e-31 140.2 146 45.9
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 9.0e-31 137.5 144 47.9
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 2.0e-30 136.3 139 52.5
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 4.5e-30 135.2 139 52.5
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 5.8e-30 134.8 150 47.3
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 7.6e-30 134.4 129 55.0
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 2.9e-29 132.5 145 48.3
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 4.9e-29 131.7 145 46.2
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 4.9e-29 131.7 128 56.2
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 3.2e-28 129.0 143 48.3
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 4.2e-28 128.6 145 44.1
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 7.1e-28 127.9 142 51.4
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 9.3e-28 127.5 152 42.8
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 1.2e-27 127.1 125 52.8
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.6e-27 126.7 145 44.1
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 1.6e-27 126.7 152 44.1
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 1.6e-27 126.7 152 44.1
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 1.6e-27 126.7 141 46.1
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 7.9e-27 124.4 152 43.4
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 7.9e-27 124.4 145 44.8
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 7.9e-27 124.4 145 44.8
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 3.0e-26 122.5 152 42.8
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 3.0e-26 122.5 152 42.8
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 3.0e-26 122.5 164 46.3
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 9.6e-25 117.5 141 46.1
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.3e-24 117.1 136 52.9
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 1.6e-24 116.7 123 53.7
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.6e-24 116.7 140 50.7
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 6.4e-21 104.8 115 53.0
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.4e-20 103.6 118 44.9
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 6.0e-19 98.2 83 55.4
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 1.3e-18 97.1 73 63.0
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 3.5e-11 72.4 129 34.1
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 3.9e-10 68.9 151 35.8
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 6.7e-10 68.2 39 79.5
TWI81G0948 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 2.6e-06 56.2 35 71.4


User provided reference genes

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