Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02799 Aquilegia oxysepala HOM05D003268 ORTHO05D003719 3.0e-164 582.0 351 100.0
Manes.11G020800 Manihot esculenta HOM05D003268 ORTHO05D003719 1.1e-25 121.7 188 37.2
PSO761G0464 Papaver somniferum HOM05D003268 ORTHO05D003719 1.1e-25 121.7 194 39.2
TAR633G0292 Trochodendron aralioides HOM05D003268 ORTHO05D003719 2.5e-25 120.6 186 37.1
TAR362G1252 Trochodendron aralioides HOM05D003268 ORTHO05D003719 4.2e-25 119.8 187 35.8
PSO210G7784 Papaver somniferum HOM05D003268 ORTHO05D003719 1.2e-24 118.2 191 39.8
Aqoxy2G02513 Aquilegia oxysepala HOM05D003268 ORTHO05D003719 1.6e-24 117.9 181 38.1
Manes.08G107700 Manihot esculenta HOM05D003268 ORTHO05D003719 3.6e-24 116.7 190 33.7
MBI19_g47476_MAGBIO Magnolia biondii HOM05D003268 ORTHO05D003719 6.1e-24 115.9 185 35.7
Cc02_g35810 Coffea canephora HOM05D003268 ORTHO05D003719 3.0e-23 113.6 207 35.7
COL.COLO4_34517 Corchorus olitorius HOM05D003268 ORTHO05D003719 3.0e-23 113.6 186 33.9
CSS0047817 Camellia sinensis var. sinensis HOM05D003268 ORTHO05D003719 1.2e-22 111.7 179 36.9
Duzib212G0032 Durio zibethinus HOM05D003268 ORTHO05D003719 2.0e-22 110.9 205 34.1
Gohir.A02G058400 Gossypium hirsutum HOM05D003268 ORTHO05D003719 2.0e-22 110.9 192 36.5
Lj6P701T18 Lonicera japonica HOM05D003268 ORTHO05D003719 2.0e-22 110.9 191 36.6
TAR636G0250 Trochodendron aralioides HOM05D003268 ORTHO05D003719 2.0e-22 110.9 187 36.9
Gohir.D02G064200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 2.6e-22 110.5 190 35.3
Gorai.005G072500 Gossypium raimondii HOM05D003268 ORTHO05D003719 2.6e-22 110.5 190 35.3
Thecc.04G313000 Theobroma cacao HOM05D003268 ORTHO05D003719 4.4e-22 109.8 188 34.0
Ca_10197_v3 Cicer arietinum L. HOM05D003268 ORTHO05D003719 7.5e-22 109.0 180 38.3
Nitab4.5_0001808g0030 Nicotiana tabacum HOM05D003268 ORTHO05D003719 7.5e-22 109.0 184 34.2
Dinv30944 Davidia involucrata HOM05D003268 ORTHO05D003719 9.8e-22 108.6 201 37.3
Sopen03g033360 Solanum pennellii HOM05D003268 ORTHO05D003796 1.3e-21 108.2 194 34.5
PGSC0003DMG400024495 Solanum tuberosum HOM05D003268 ORTHO05D003719 1.7e-21 107.8 189 36.0
Solyc03g114270.1 Solanum lycopersicum HOM05D003268 ORTHO05D003719 2.9e-21 107.1 189 34.9
Lj5g0018140 Lotus japonicus HOM05D003268 ORTHO05D003719 3.7e-21 106.7 169 39.6
Psat6g155480 Pisum sativum HOM05D003268 ORTHO05D003719 4.9e-21 106.3 179 36.9
Haze_00767 Corylus avellana HOM05D003268 ORTHO05D003719 1.4e-20 104.8 181 37.0
Nitab4.5_0000039g0190 Nicotiana tabacum HOM05D003268 ORTHO05D003719 1.8e-20 104.4 196 32.7
Cpa.g.sc53.77 Carica papaya HOM05D003268 ORTHO05D003719 3.2e-20 103.6 174 35.6
QL06p014213 Quercus lobata HOM05D003268 ORTHO05D003719 3.2e-20 103.6 200 33.5
RcHm_v2.0_Chr3g0458411 Rosa chinensis HOM05D003268 ORTHO05D003719 3.2e-20 103.6 189 33.9
Lj5P319T26 Lonicera japonica HOM05D003268 ORTHO05D003719 5.4e-20 102.8 194 35.6
PGR031G0843 Punica granatum HOM05D003268 ORTHO05D003719 5.4e-20 102.8 210 31.4
Haze_03993 Corylus avellana HOM05D003268 ORTHO05D003719 7.0e-20 102.4 189 36.0
MSTRG.16427 Avicennia marina HOM05D003268 ORTHO05D003719 1.2e-19 101.7 184 34.8
SalBow4G1159 Salvia bowleyana HOM05D003268 ORTHO05D003719 1.2e-19 101.7 197 34.0
TPR.G2590 Trifolium pratense HOM05D003268 ORTHO05D003719 1.2e-19 101.7 178 37.1
Dinv29508 Davidia involucrata HOM05D003268 ORTHO05D003719 2.0e-19 100.9 177 33.3
Medtr1g484850 Medicago truncatula HOM05D003268 ORTHO05D003719 2.0e-19 100.9 189 36.0
Oeu023377.1 Olea europaea HOM05D003268 ORTHO05D003719 2.7e-19 100.5 193 34.7
THA.LOC104821812 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 2.7e-19 100.5 175 33.7
CiPaw.07G035600 Carya illinoinensis HOM05D003268 ORTHO05D003719 3.5e-19 100.1 198 33.8
MELO3C015242.2 Cucumis melo HOM05D003268 ORTHO05D003719 3.5e-19 100.1 178 34.3
FvH4_6g08440 Fragaria vesca HOM05D003268 ORTHO05D003719 3.5e-19 100.1 187 34.8
FAN14G0797 Fragaria x ananassa HOM05D003268 ORTHO05D003719 3.5e-19 100.1 187 34.8
Hma1.2p1_0759F.1_g213940 Hydrangea macrophylla HOM05D003268 ORTHO05D003719 3.5e-19 100.1 183 35.0
Cpa.g.sc48.222 Carica papaya HOM05D003268 ORTHO05D003719 4.6e-19 99.8 167 34.1
Lalb_Chr02g0147571 Lupinus albus HOM05D003268 ORTHO05D003719 4.6e-19 99.8 180 35.0
Glyma.13G118100 Glycine max HOM05D003268 ORTHO05D003719 5.9e-19 99.4 198 32.3
TWI56G0501 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 5.9e-19 99.4 181 33.7
Ciclev10005819m.g Citrus clementina HOM05D003268 ORTHO05D003719 7.8e-19 99.0 211 31.3
Glyma.17G041900 Glycine max HOM05D003268 ORTHO05D003719 7.8e-19 99.0 198 31.3
Solyc10g011990.1 Solanum lycopersicum HOM05D003268 ORTHO05D003719 1.0e-18 98.6 200 34.0
Sopen10g005750 Solanum pennellii HOM05D003268 ORTHO05D003719 1.0e-18 98.6 200 34.0
Oeu020279.1 Olea europaea HOM05D003268 ORTHO05D003719 1.3e-18 98.2 179 33.0
Oeu023379.1 Olea europaea HOM05D003268 ORTHO05D003719 1.3e-18 98.2 193 34.2
Sc16g0009390 Simmondsia chinensis HOM05D003268 ORTHO05D003719 1.3e-18 98.2 196 32.1
ClCG03G017870 Citrullus lanatus HOM05D003268 ORTHO05D003719 1.7e-18 97.8 196 31.6
Oeu016542.1 Olea europaea HOM05D003268 ORTHO05D003719 1.7e-18 97.8 200 33.0
SHI00050 Sapria himalayana HOM05D002272 ORTHO05D005405 1.7e-18 97.8 192 32.3
Sed0007403 Sechium edule HOM05D003268 ORTHO05D003719 1.7e-18 97.8 196 32.1
CsaV3_1G038030 Cucumis sativus L. HOM05D003268 ORTHO05D003719 2.3e-18 97.4 178 33.7
Lalb_Chr13g0299031 Lupinus albus HOM05D003268 ORTHO05D003719 2.3e-18 97.4 191 34.0
Lalb_Chr07g0181591 Lupinus albus HOM05D003268 ORTHO05D003719 3.9e-18 96.7 198 29.3
PSO170G4270 Papaver somniferum HOM05D003268 ORTHO05D003719 3.9e-18 96.7 184 31.5
Atru.chr4.3150 Acer truncatum HOM05D003268 ORTHO05D003719 8.6e-18 95.5 184 29.3
CAN.G1248.20 Capsicum annuum HOM05D003268 ORTHO05D003719 8.6e-18 95.5 186 33.9
CANSAT54G2527 Cannabis sativa HOM05D003268 ORTHO05D003719 1.5e-17 94.7 207 29.5
FAN02G3445 Fragaria x ananassa HOM05D003268 ORTHO05D003719 1.5e-17 94.7 184 33.7
Lj4g0025064 Lotus japonicus HOM05D003268 ORTHO05D003719 1.5e-17 94.7 191 31.4
Sed0001415 Sechium edule HOM05D003268 ORTHO05D003719 1.5e-17 94.7 197 32.5
MELO3C006751.2 Cucumis melo HOM05D003268 ORTHO05D003719 2.5e-17 94.0 194 29.9
PGSC0003DMG400044126 Solanum tuberosum HOM05D003268 ORTHO05D003719 2.5e-17 94.0 186 34.9
Nitab4.5_0005904g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 3.3e-17 93.6 186 33.3
Oeu034985.1 Olea europaea HOM05D003268 ORTHO05D003719 4.3e-17 93.2 196 32.7
Solyc01g101160.2 Solanum lycopersicum HOM05D003268 ORTHO05D003719 5.6e-17 92.8 186 34.4
Sopen01g044640 Solanum pennellii HOM05D003268 ORTHO05D003719 5.6e-17 92.8 186 34.4
VMungo1215G0793 Vigna mungo HOM05D003268 ORTHO05D003719 7.3e-17 92.4 193 31.1
Phvul.003G123200 Phaseolus vulgaris HOM05D003268 ORTHO05D003719 9.5e-17 92.0 192 30.7
Potri.010G002200 Populus trichocarpa HOM05D003268 ORTHO05D003719 9.5e-17 92.0 187 35.3
Rhsim11G0103200 Rhododendron simsii HOM05D003268 ORTHO05D003719 1.2e-16 91.7 192 33.3
Nitab4.5_0002485g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 1.6e-16 91.3 186 33.9
vmacro01600 Vaccinium macrocarpon HOM05D003268 ORTHO05D003719 2.1e-16 90.9 185 33.0
PGSC0003DMG400044873 Solanum tuberosum HOM05D003268 ORTHO05D003719 3.6e-16 90.1 199 30.7
SGA_v2.0_scaffold22G09705 Striga asiatica HOM05D003268 ORTHO05D003719 3.6e-16 90.1 175 33.7
Ca_21366_v3 Cicer arietinum L. HOM05D003268 ORTHO05D003719 4.7e-16 89.7 186 31.2
Aa31LG8G4410 Aethionema arabicum HOM05D002272 ORTHO05D005405 6.2e-16 89.4 200 31.5
MSTRG.20352 Avicennia marina HOM05D003268 ORTHO05D003719 6.2e-16 89.4 176 31.8
Gohir.A13G177600 Gossypium hirsutum HOM05D003268 ORTHO05D003719 8.0e-16 89.0 171 31.0
PGSC0003DMG401019388 Solanum tuberosum HOM05D003268 ORTHO05D003719 8.0e-16 89.0 196 31.1
QL03p010269 Quercus lobata HOM05D003268 ORTHO05D003719 1.0e-15 88.6 173 31.8
QL03p010503 Quercus lobata HOM05D003268 ORTHO05D003719 1.0e-15 88.6 173 31.8
TWI09G0361 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 1.0e-15 88.6 187 31.6
HanXRQChr10g0294291 Helianthus annuus HOM05D003268 ORTHO05D003719 1.4e-15 88.2 178 36.0
Lalb_Chr06g0167311 Lupinus albus HOM05D003268 ORTHO05D003719 1.4e-15 88.2 185 32.4
CiPaw.01G129300 Carya illinoinensis HOM05D003268 ORTHO05D003719 1.8e-15 87.8 189 31.2
Sabra10G0001700 Salix brachista HOM05D003268 ORTHO05D003719 1.8e-15 87.8 202 33.2
Actinidia11688 Actinidia chinensis HOM05D003268 ORTHO05D003719 3.1e-15 87.0 173 35.3
C05p48980 Brassica napus HOM05D003268 ORTHO05D003719 3.1e-15 87.0 183 33.9
BolC5t33638H Brassica oleracea HOM05D003268 ORTHO05D003719 3.1e-15 87.0 183 33.9
Psat0s1206g0240 Pisum sativum HOM05D003268 ORTHO05D003719 3.1e-15 87.0 191 31.9
Sed0010166 Sechium edule HOM05D003268 ORTHO05D003719 4.0e-15 86.7 194 28.9
Gohir.D13G184200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 8.9e-15 85.5 171 30.4
Gorai.013G209800 Gossypium raimondii HOM05D003268 ORTHO05D003719 8.9e-15 85.5 171 30.4
Phvul.007G204700 Phaseolus vulgaris HOM05D003268 ORTHO05D003719 8.9e-15 85.5 172 33.1
SalBow5G1243 Salvia bowleyana HOM05D003268 ORTHO05D003719 8.9e-15 85.5 189 29.6
Cfa015729 Carpinus fangiana HOM05D003268 ORTHO05D003719 1.2e-14 85.1 152 37.5
Migut.N00971 Erythranthe guttata HOM05D003268 ORTHO05D003719 1.2e-14 85.1 196 29.6
BcaB06g25842 Brassica carinata HOM05D003268 ORTHO05D003719 1.5e-14 84.7 186 32.3
Duzib128G0788 Durio zibethinus HOM05D003268 ORTHO05D003719 1.5e-14 84.7 182 30.2
Thhalv10022081m.g Eutrema salsugineum HOM05D003268 ORTHO05D003719 1.5e-14 84.7 197 32.0
Thecc.05G329300 Theobroma cacao HOM05D003268 ORTHO05D003719 1.5e-14 84.7 184 29.3
unitig_8.g4507 Utricularia gibba HOM05D003268 ORTHO05D003719 2.6e-14 84.0 176 33.5
Ah.10g026900 Amaranthus hybridus HOM05D003268 ORTHO05D003719 3.4e-14 83.6 194 27.3
COL.COLO4_05489 Corchorus olitorius HOM05D003268 ORTHO05D003719 3.4e-14 83.6 167 30.5
Migut.O00762 Erythranthe guttata HOM05D003268 ORTHO05D003719 4.4e-14 83.2 181 30.4
Glyma.10G143800 Glycine max HOM05D003268 ORTHO05D003719 4.4e-14 83.2 184 32.1
HanXRQChr09g0248281 Helianthus annuus HOM05D003268 ORTHO05D003719 4.4e-14 83.2 209 31.6
Medtr4g124100 Medicago truncatula HOM05D003268 ORTHO05D003719 4.4e-14 83.2 194 30.4
Sp3g15630 Schrenkiella parvula HOM05D003268 ORTHO05D003719 4.4e-14 83.2 187 32.6
HPP92_012769 Vanilla planifolia HOM05D003268 ORTHO05D003719 4.4e-14 83.2 172 31.4
FAN09G1400 Fragaria x ananassa HOM05D003268 ORTHO05D003719 5.8e-14 82.8 186 30.6
Glyma.20G092502 Glycine max HOM05D003268 ORTHO05D003719 5.8e-14 82.8 184 33.7
VMungo0720G1780 Vigna mungo HOM05D003268 ORTHO05D003719 5.8e-14 82.8 171 32.7
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 7.5e-14 82.4 165 32.7
RcHm_v2.0_Chr4g0427521 Rosa chinensis HOM05D003268 ORTHO05D003719 9.8e-14 82.0 204 31.9
BcaC05g28789 Brassica carinata HOM05D003268 ORTHO05D003719 1.7e-13 81.3 184 33.7
ECA240G0886 Erigeron canadensis HOM05D003268 ORTHO05D003719 2.9e-13 80.5 212 32.1
HanXRQChr09g0250221 Helianthus annuus HOM05D003268 ORTHO05D003719 3.7e-13 80.1 199 31.7
Atru.chr12.1545 Acer truncatum HOM05D003268 ORTHO05D003719 6.4e-13 79.3 154 35.1
MD13G1139400 Malus domestica HOM05D003268 ORTHO05D003719 8.3e-13 79.0 202 30.7
THA.LOC104820490 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 1.1e-12 78.6 185 28.6
CsaV3_3G015530 Cucumis sativus L. HOM05D003268 ORTHO05D003719 1.4e-12 78.2 137 31.4
Prupe.1G105300 Prunus persica HOM05D003268 ORTHO05D003719 1.4e-12 78.2 114 36.8
C08p12950 Brassica napus HOM05D003268 ORTHO05D003719 5.4e-12 76.3 174 32.2
Potri.008G206600 Populus trichocarpa HOM05D003268 ORTHO05D003719 7.0e-12 75.9 167 34.7
MD16G1136300 Malus domestica HOM05D003268 ORTHO05D003719 9.2e-12 75.5 204 29.4
TPR.G12613 Trifolium pratense HOM05D003268 ORTHO05D003719 9.2e-12 75.5 186 30.1
BraA08t35363Z Brassica rapa HOM05D003268 ORTHO05D003719 1.2e-11 75.1 197 26.4
BolC8t48925H Brassica oleracea HOM05D003268 ORTHO05D003719 1.6e-11 74.7 174 32.2
Ciclev10013870m.g Citrus clementina HOM05D003268 ORTHO05D003719 1.6e-11 74.7 170 30.6
BcaC07g38514 Brassica carinata HOM05D003268 ORTHO05D003719 2.7e-11 73.9 167 32.9
BcaC09g48706 Brassica carinata HOM05D003268 ORTHO05D003719 3.5e-11 73.6 179 31.3
A08p34520 Brassica napus HOM05D003268 ORTHO05D003719 3.5e-11 73.6 191 27.7
BolC1t04640H Brassica oleracea HOM05D003268 ORTHO05D003719 3.5e-11 73.6 179 31.3
ECA234G2755 Erigeron canadensis HOM05D003268 ORTHO05D003719 3.5e-11 73.6 182 29.1
Sabra08G0150300 Salix brachista HOM05D003268 ORTHO05D003719 4.6e-11 73.2 167 34.7
Migut.B00893 Erythranthe guttata HOM05D003268 ORTHO05D003719 6.0e-11 72.8 193 29.5
DCAR_001893 Daucus carota HOM05D003268 ORTHO05D003719 1.0e-10 72.0 201 28.9
C01p46720 Brassica napus HOM05D003268 ORTHO05D003719 1.7e-10 71.2 165 32.1
A06p06210 Brassica napus HOM05D003268 ORTHO05D003719 3.0e-10 70.5 188 29.3
BraA06t23832Z Brassica rapa HOM05D003268 ORTHO05D003719 3.0e-10 70.5 188 29.3
C05p07520 Brassica napus HOM05D003268 ORTHO05D003719 6.6e-10 69.3 188 29.3
BolC5t29506H Brassica oleracea HOM05D003268 ORTHO05D003719 6.6e-10 69.3 188 29.3
Migut.B00880 Erythranthe guttata HOM05D003268 ORTHO05D003719 6.6e-10 69.3 188 30.3
Thhalv10008580m.g Eutrema salsugineum HOM05D003268 ORTHO05D003719 1.9e-09 67.8 174 29.9
BraA08t35364Z Brassica rapa HOM05D003268 ORTHO05D003719 9.5e-09 65.5 190 28.4
unitig_578.g15945 Utricularia gibba HOM05D003268 ORTHO05D003719 2.1e-08 64.3 107 33.6
CARHR092780 Cardamine hirsuta HOM05D003268 ORTHO05D003719 2.8e-08 63.9 194 26.3
A08p34530 Brassica napus HOM05D003268 ORTHO05D003719 3.6e-08 63.5 190 27.4
Carub.0003s1718 Capsella rubella HOM05D003268 ORTHO05D003719 4.7e-08 63.2 203 30.0
ATR0796G330 Amborella trichopoda HOM05D003268 ORTHO05D003719 6.2e-08 62.8 175 31.4
BcaC09g48702 Brassica carinata HOM05D003268 ORTHO05D003719 1.8e-07 61.2 181 29.3
C01p46780 Brassica napus HOM05D003268 ORTHO05D003719 1.8e-07 61.2 181 29.3
BolC1t04651H Brassica oleracea HOM05D003268 ORTHO05D003719 1.8e-07 61.2 181 29.3
BcaB04g20839 Brassica carinata HOM05D003268 ORTHO05D003719 4.0e-07 60.1 150 28.7
AL3G30540 Arabidopsis lyrata HOM05D003268 ORTHO05D003719 1.2e-06 58.5 186 28.5
FAN05G0723 Fragaria x ananassa HOM05D003268 ORTHO05D003719 1.2e-06 58.5 72 40.3
A01p36890 Brassica napus HOM05D003268 ORTHO05D003719 1.5e-06 58.2 180 27.8
BraA01t03748Z Brassica rapa HOM05D003268 ORTHO05D003719 1.5e-06 58.2 180 27.8
AT3G17460 Arabidopsis thaliana HOM05D003268 ORTHO05D003719 7.5e-06 55.8 183 27.3
Os01g0245600 Oryza sativa ssp. japonica HOM05D003268 ORTHO05D003719 7.5e-06 55.8 102 35.3


User provided reference genes

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