Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02790 Aquilegia oxysepala HOM05D003412 ORTHO05D003962 3.5e-147 525.0 283 100.0
Nn4g25397 Nelumbo nucifera HOM05D003412 ORTHO05D003962 5.6e-76 288.5 307 58.0
Actinidia16911 Actinidia chinensis HOM05D003412 ORTHO05D003962 1.2e-75 287.3 307 54.4
Hma1.2p1_3304F.1_g335080 Hydrangea macrophylla HOM05D003412 ORTHO05D003962 2.8e-75 286.2 307 56.0
Thecc.05G329000 Theobroma cacao HOM05D003412 ORTHO05D003962 6.2e-75 285.0 307 56.0
Duzib177G0752 Durio zibethinus HOM05D003412 ORTHO05D003962 1.4e-74 283.9 307 55.7
DCAR_025305 Daucus carota HOM05D003412 ORTHO05D003962 8.9e-74 281.2 307 54.7
GSVIVG01031318001 Vitis vinifera HOM05D003412 ORTHO05D003962 7.5e-73 278.1 307 55.7
Cpa.g.sc48.220 Carica papaya HOM05D003412 ORTHO05D003962 1.3e-72 277.3 307 55.0
Duzib128G1566 Durio zibethinus HOM05D003412 ORTHO05D003962 1.7e-72 276.9 307 54.7
PSO210G2054 Papaver somniferum HOM05D003412 ORTHO05D003962 2.9e-72 276.2 307 53.7
PSO761G0645 Papaver somniferum HOM05D003412 ORTHO05D003962 4.9e-72 275.4 307 53.4
PGSC0003DMG400018247 Solanum tuberosum HOM05D003412 ORTHO05D003962 4.9e-72 275.4 307 53.4
CiPaw.07G035400 Carya illinoinensis HOM05D003412 ORTHO05D003962 1.1e-71 274.2 307 54.4
Eucgr.H01317 Eucalyptus grandis HOM05D003412 ORTHO05D003962 1.9e-71 273.5 310 52.6
Prupe.6G305600 Prunus persica HOM05D003412 ORTHO05D003962 1.9e-71 273.5 307 54.7
Sopen01g044580 Solanum pennellii HOM05D003412 ORTHO05D003962 1.9e-71 273.5 307 53.7
Gohir.D13G116700 Gossypium hirsutum HOM05D003412 ORTHO05D003962 2.4e-71 273.1 307 55.0
Gorai.013G131200 Gossypium raimondii HOM05D003412 ORTHO05D003962 2.4e-71 273.1 307 55.0
MSTRG.5167 Avicennia marina HOM05D003412 ORTHO05D003962 1.0e-69 267.7 306 53.6
Oeu036644.1 Olea europaea HOM05D003412 ORTHO05D003962 2.3e-69 266.5 307 53.1
Hma1.2p1_0052F.1_g030415 Hydrangea macrophylla HOM05D003412 ORTHO05D003962 3.0e-69 266.2 316 51.9
COL.COLO4_05512 Corchorus olitorius HOM05D003412 ORTHO05D003962 5.0e-69 265.4 307 52.4
Solyc01g101130.3 Solanum lycopersicum HOM05D003412 ORTHO05D003962 5.0e-69 265.4 303 53.5
RcHm_v2.0_Chr3g0458381 Rosa chinensis HOM05D003412 ORTHO05D003962 1.5e-68 263.8 307 51.8
Rhsim11G0101900 Rhododendron simsii HOM05D003412 ORTHO05D003962 1.9e-68 263.5 318 50.0
MSTRG.16423 Avicennia marina HOM05D003412 ORTHO05D003962 2.5e-68 263.1 309 52.4
CAN.G1248.24 Capsicum annuum HOM05D003412 ORTHO05D003962 2.5e-68 263.1 272 56.6
Sc16g0009380 Simmondsia chinensis HOM05D003412 ORTHO05D003962 2.5e-68 263.1 307 50.5
CiPaw.08G150800 Carya illinoinensis HOM05D003412 ORTHO05D003962 3.3e-68 262.7 307 52.8
vmacro01603 Vaccinium macrocarpon HOM05D003412 ORTHO05D003962 4.3e-68 262.3 311 50.2
MSTRG.27914 Avicennia marina HOM05D003412 ORTHO05D003962 7.3e-68 261.5 307 51.1
Atru.chr12.1551 Acer truncatum HOM05D003412 ORTHO05D003962 1.2e-67 260.8 277 56.7
Ciclev10012076m.g Citrus clementina HOM05D003412 ORTHO05D003962 1.2e-67 260.8 307 52.1
Lj5A319T47 Lonicera japonica HOM05D003412 ORTHO05D003962 1.2e-67 260.8 283 55.1
Gohir.A13G113600 Gossypium hirsutum HOM05D003412 ORTHO05D003962 2.1e-67 260.0 280 55.7
CANSAT54G2189 Cannabis sativa HOM05D003412 ORTHO05D003962 3.6e-67 259.2 316 49.7
VMungo0720G0630 Vigna mungo HOM05D003412 ORTHO05D003962 4.7e-67 258.8 309 52.4
MELO3C004154.2 Cucumis melo HOM05D003412 ORTHO05D003962 2.3e-66 256.5 309 51.8
Nitab4.5_0001931g0010 Nicotiana tabacum HOM05D003412 ORTHO05D003962 3.1e-66 256.1 329 50.8
Nitab4.5_0014791g0020 Nicotiana tabacum HOM05D003412 ORTHO05D003962 3.1e-66 256.1 325 51.4
SalBow1G0001 Salvia bowleyana HOM05D003412 ORTHO05D003962 3.1e-66 256.1 300 52.0
MD12G1200500 Malus domestica HOM05D003412 ORTHO05D003962 8.9e-66 254.6 304 52.0
TPR.G2623 Trifolium pratense HOM05D003412 ORTHO05D003962 8.9e-66 254.6 308 51.3
Rhsim05G0121800 Rhododendron simsii HOM05D003412 ORTHO05D003962 3.4e-65 252.7 307 51.1
FAN09G0161 Fragaria x ananassa HOM05D003412 ORTHO05D003962 7.5e-65 251.5 309 50.5
Nn3g21904 Nelumbo nucifera HOM05D003412 ORTHO05D003962 7.5e-65 251.5 307 51.1
Haze_03996 Corylus avellana HOM05D003412 ORTHO05D003962 9.9e-65 251.1 314 49.7
Sabra13G0002900 Salix brachista HOM05D003412 ORTHO05D003962 1.7e-64 250.4 308 51.0
GSVIVG01028212001 Vitis vinifera HOM05D003412 ORTHO05D003962 1.7e-64 250.4 307 49.8
Eucgr.B01817 Eucalyptus grandis HOM05D003412 ORTHO05D003962 2.2e-64 250.0 309 49.8
Lalb_Chr06g0167331 Lupinus albus HOM05D003412 ORTHO05D003962 6.4e-64 248.4 307 49.2
Cc02_g35780 Coffea canephora HOM05D003412 ORTHO05D003962 8.3e-64 248.1 272 53.7
Ah.06g190650 Amaranthus hybridus HOM05D003412 ORTHO05D003962 1.1e-63 247.7 294 50.7
Aqoxy2G02528 Aquilegia oxysepala HOM05D003412 ORTHO05D003962 1.4e-63 247.3 307 49.8
MD04G1187100 Malus domestica HOM05D003412 ORTHO05D003962 2.4e-63 246.5 307 51.1
Phvul.007G204500 Phaseolus vulgaris HOM05D003412 ORTHO05D003962 9.2e-63 244.6 274 54.4
Glyma.10G144000 Glycine max HOM05D003412 ORTHO05D003962 1.2e-62 244.2 309 49.5
Lsat_1_v5_gn_9_77100 Lactuca sativa HOM05D003412 ORTHO05D003962 2.7e-62 243.0 309 49.5
Peaxi162Scf00357g00017 Petunia axillaris HOM05D003412 ORTHO05D003962 4.6e-62 242.3 289 51.9
Zm00001eb417390 Zea mays HOM05D003412 ORTHO05D003962 4.6e-62 242.3 309 49.5
arahy.Tifrunner.gnm1.ann1.WSUD3I Arachis hypogaea HOM05D003412 ORTHO05D003962 1.0e-61 241.1 311 48.2
PGR083G2508 Punica granatum HOM05D003412 ORTHO05D003962 1.0e-61 241.1 308 48.7
Oeu000100.1 Olea europaea HOM05D003412 ORTHO05D003962 1.3e-61 240.7 272 53.3
CsaV3_2G007300 Cucumis sativus L. HOM05D003412 ORTHO05D003962 1.7e-61 240.4 320 48.1
Oeu061921.1 Olea europaea HOM05D003412 ORTHO05D003962 2.3e-61 240.0 282 52.5
DCAR_029287 Daucus carota HOM05D003412 ORTHO05D003962 8.6e-61 238.0 308 48.7
EL10Ac4g09549 Beta vulgaris HOM05D003412 ORTHO05D003962 1.5e-60 237.3 296 47.6
CDE08G0751 Ceratophyllum demersum HOM05D003412 ORTHO05D003962 2.5e-60 236.5 309 48.2
FAN14G3569 Fragaria x ananassa HOM05D003412 ORTHO05D003962 2.5e-60 236.5 309 48.5
Lj5g0005042 Lotus japonicus HOM05D003412 ORTHO05D003962 1.6e-59 233.8 309 46.6
Os05g0135900 Oryza sativa ssp. japonica HOM05D003412 ORTHO05D003962 2.1e-59 233.4 307 48.2
Carub.0006s2442 Capsella rubella HOM05D003412 ORTHO05D003962 6.2e-59 231.9 307 46.6
arahy.Tifrunner.gnm1.ann1.LCTE14 Arachis hypogaea HOM05D003412 ORTHO05D003962 3.1e-58 229.6 311 46.6
MBI18_g09639_MAGBIO Magnolia biondii HOM05D003412 ORTHO05D003962 3.1e-58 229.6 296 49.3
ClCG02G014670 Citrullus lanatus HOM05D003412 ORTHO05D003962 4.0e-58 229.2 309 47.9
Migut.B00877 Erythranthe guttata HOM05D003412 ORTHO05D003962 4.0e-58 229.2 309 49.2
Hund07273 Selenicereus undatus HOM05D003412 ORTHO05D003962 6.8e-58 228.4 282 48.6
ECA236G3082 Erigeron canadensis HOM05D003412 ORTHO05D003962 2.0e-57 226.9 310 47.4
THA.LOC104818749 Tarenaya hassleriana HOM05D003412 ORTHO05D003962 3.4e-57 226.1 310 46.1
Lju99C6G3 Lonicera japonica HOM05D003412 ORTHO05D003962 7.6e-57 224.9 251 54.2
ATR0796G311 Amborella trichopoda HOM05D003412 ORTHO05D003962 2.2e-56 223.4 307 46.9
SEGI_01307 Sequoiadendron giganteum HOM05D003412 ORTHO05D003962 2.9e-56 223.0 307 44.6
Dinv24506 Davidia involucrata HOM05D003412 ORTHO05D003962 4.9e-56 222.2 307 48.5
AUR62006809 Chenopodium quinoa HOM05D003412 ORTHO05D003962 8.4e-56 221.5 318 44.3
FvH4_6g08410 Fragaria vesca HOM05D003412 ORTHO05D003962 1.1e-55 221.1 272 50.4
AUR62000468 Chenopodium quinoa HOM05D003412 ORTHO05D003962 4.1e-55 219.2 283 46.6
Sabra05G0015000 Salix brachista HOM05D003412 ORTHO05D003962 4.1e-55 219.2 320 45.0
Hund07277 Selenicereus undatus HOM05D003412 ORTHO05D003962 4.1e-55 219.2 282 47.5
Aa31LG11G9870 Aethionema arabicum HOM05D003412 ORTHO05D003962 7.1e-55 218.4 309 44.3
HanXRQChr03g0088701 Helianthus annuus HOM05D003412 ORTHO05D003962 7.1e-55 218.4 307 46.9
Sed0023403 Sechium edule HOM05D003412 ORTHO05D003962 9.2e-55 218.0 308 46.4
Glyma.20G092900 Glycine max HOM05D003412 ORTHO05D003962 1.2e-54 217.6 309 46.3
Thhalv10008143m.g Eutrema salsugineum HOM05D003412 ORTHO05D003962 4.6e-54 215.7 307 43.0
TAR362G0077 Trochodendron aralioides HOM05D003412 ORTHO05D003962 1.0e-53 214.5 307 45.9
MBI19_g32732_MAGBIO Magnolia biondii HOM05D003412 ORTHO05D003962 1.3e-53 214.2 299 47.2
BcaNung03675 Brassica carinata HOM05D003412 ORTHO05D003962 1.7e-53 213.8 307 43.3
arahy.Tifrunner.gnm1.ann1.36CNLM Arachis hypogaea HOM05D003412 ORTHO05D003962 2.3e-53 213.4 308 45.1
A06p37010 Brassica napus HOM05D003412 ORTHO05D003962 5.1e-53 212.2 307 43.6
Hund21837 Selenicereus undatus HOM05D003412 ORTHO05D003962 8.7e-53 211.5 245 46.9
Sabra05G0000900 Salix brachista HOM05D003412 ORTHO05D003962 1.1e-52 211.1 308 44.8
CARHR009430 Cardamine hirsuta HOM05D003412 ORTHO05D003962 2.5e-52 209.9 307 43.3
arahy.Tifrunner.gnm1.ann1.D23GS1 Arachis hypogaea HOM05D003412 ORTHO05D003962 9.6e-52 208.0 308 44.2
CARHR080290 Cardamine hirsuta HOM05D003412 ORTHO05D003962 9.6e-52 208.0 309 44.3
Lalb_Chr21g0310081 Lupinus albus HOM05D003412 ORTHO05D003962 9.6e-52 208.0 307 43.3
THA.LOC104816843 Tarenaya hassleriana HOM05D003412 ORTHO05D003962 1.2e-51 207.6 307 44.6
AT5G26770 Arabidopsis thaliana HOM05D003412 ORTHO05D003962 2.1e-51 206.8 330 42.1
TAR365G0905 Trochodendron aralioides HOM05D003412 ORTHO05D003962 3.6e-51 206.1 253 52.6
Sp1g08080 Schrenkiella parvula HOM05D003412 ORTHO05D003962 6.2e-51 205.3 307 42.0
SGA_v2.0_scaffold117G32404 Striga asiatica HOM05D003412 ORTHO05D003962 6.2e-51 205.3 278 46.8
vmacro19768 Vaccinium macrocarpon HOM05D003412 ORTHO05D003962 6.2e-51 205.3 325 43.4
THA.LOC104821745 Tarenaya hassleriana HOM05D003412 ORTHO05D003962 8.1e-51 204.9 360 39.4
BcaC04g23636 Brassica carinata HOM05D003412 ORTHO05D003962 1.1e-50 204.5 305 41.6
Carub.0001s0882 Capsella rubella HOM05D003412 ORTHO05D003962 2.4e-50 203.4 307 41.7
Lalb_Chr04g0260311 Lupinus albus HOM05D003412 ORTHO05D003962 5.2e-50 202.2 306 43.8
BraA06t26626Z Brassica rapa HOM05D003412 ORTHO05D003962 9.0e-50 201.4 324 41.4
Actinidia01664 Actinidia chinensis HOM05D003412 ORTHO05D003962 2.9e-48 196.4 307 42.3
Lj9C230G11 Lonicera japonica HOM05D003412 ORTHO05D003962 2.4e-47 193.4 264 48.5
HPP92_026058 Vanilla planifolia HOM05D003412 ORTHO05D003962 3.2e-47 193.0 307 43.0
BcaNung03912 Brassica carinata HOM05D003412 ORTHO05D003962 9.3e-47 191.4 307 40.4
Aa31LG1G5630 Aethionema arabicum HOM05D003412 ORTHO05D003962 4.6e-46 189.1 310 39.7
unitig_22.g5801 Utricularia gibba HOM05D003412 ORTHO05D003962 1.0e-45 188.0 298 44.0
Sed0017632 Sechium edule HOM05D003412 ORTHO05D003962 5.1e-45 185.7 274 44.2
C05p07470 Brassica napus HOM05D003412 ORTHO05D003962 1.1e-44 184.5 309 39.8
A06p06180 Brassica napus HOM05D003412 ORTHO05D003962 7.3e-44 181.8 309 39.8
Zm00001eb354610 Zea mays HOM05D003412 ORTHO05D003962 1.3e-43 181.0 254 47.6
BraA06t23830Z Brassica rapa HOM05D003412 ORTHO05D003962 1.6e-43 180.6 314 38.9
BolC9t53547H Brassica oleracea HOM05D003412 ORTHO05D003962 4.0e-42 176.0 244 42.2
TAR365G0256 Trochodendron aralioides HOM05D003412 ORTHO05D003962 6.9e-42 175.3 315 40.0
TWI56G0029 Tripterygium wilfordii HOM05D003412 ORTHO05D003962 9.0e-42 174.9 307 39.4
Dinv30940 Davidia involucrata HOM05D003412 ORTHO05D003962 1.5e-41 174.1 154 63.0
AL1G19990 Arabidopsis lyrata HOM05D003412 ORTHO05D003962 2.6e-41 173.3 222 45.9
SGA_v2.0_scaffold279G46784 Striga asiatica HOM05D003412 ORTHO05D003962 4.5e-41 172.6 286 41.6
FAN05G5683 Fragaria x ananassa HOM05D003412 ORTHO05D003962 4.9e-40 169.1 309 39.2
AT1G09470 Arabidopsis thaliana HOM05D003412 ORTHO05D003962 5.4e-39 165.6 236 43.6
Manes.08G107900 Manihot esculenta HOM05D003412 ORTHO05D003962 5.4e-39 165.6 155 60.0
Migut.N00969 Erythranthe guttata HOM05D003412 ORTHO05D003962 9.3e-39 164.9 308 39.6
BolC5t29502H Brassica oleracea HOM05D003412 ORTHO05D003962 2.7e-38 163.3 309 36.6
QL03p010236 Quercus lobata HOM05D003412 ORTHO05D003962 3.5e-38 162.9 310 38.4
QL03p010471 Quercus lobata HOM05D003412 ORTHO05D003962 3.5e-38 162.9 306 38.9
TAR636G2549 Trochodendron aralioides HOM05D003412 ORTHO05D003962 6.0e-38 162.2 311 39.2
Psat6g155400 Pisum sativum HOM05D003412 ORTHO05D003962 1.8e-37 160.6 161 56.5
PSO357G0133 Papaver somniferum HOM05D003412 ORTHO05D003962 3.0e-37 159.8 250 45.6
Ca_10195_v3 Cicer arietinum L. HOM05D003412 ORTHO05D003962 6.7e-37 158.7 308 37.7
BraA09t36208Z Brassica rapa HOM05D003412 ORTHO05D003962 1.1e-36 157.9 318 35.8
Manes.09G180600 Manihot esculenta HOM05D003412 ORTHO05D003962 1.5e-36 157.5 308 39.3
Potri.013G003400 Populus trichocarpa HOM05D003412 ORTHO05D003962 3.3e-36 156.4 155 55.5
C07p41480 Brassica napus HOM05D003412 ORTHO05D003962 7.4e-36 155.2 307 36.5
BolC7t44681H Brassica oleracea HOM05D003412 ORTHO05D003962 7.4e-36 155.2 307 36.5
Medtr1g484830 Medicago truncatula HOM05D003412 ORTHO05D003962 2.1e-35 153.7 155 54.2
Thhalv10004552m.g Eutrema salsugineum HOM05D003412 ORTHO05D003962 4.8e-35 152.5 160 52.5
Sp2g21210 Schrenkiella parvula HOM05D003412 ORTHO05D003962 6.2e-35 152.1 154 52.6
Oeu029183.1 Olea europaea HOM05D003412 ORTHO05D003962 8.1e-35 151.8 221 45.7
C09p06270 Brassica napus HOM05D003412 ORTHO05D003962 9.0e-34 148.3 157 51.6
AL6G38640 Arabidopsis lyrata HOM05D003412 ORTHO05D003962 1.2e-33 147.9 307 35.8
Potri.005G003600 Populus trichocarpa HOM05D003412 ORTHO05D003962 1.2e-33 147.9 308 36.0
Hma1.2p1_3841F.1_g337660 Hydrangea macrophylla HOM05D003412 ORTHO05D003962 2.0e-33 147.1 242 43.4
CARHR186800 Cardamine hirsuta HOM05D003412 ORTHO05D003962 7.6e-33 145.2 307 35.2
Aa31LG5G16210 Aethionema arabicum HOM05D003412 ORTHO05D003962 9.9e-33 144.8 164 48.2
CDE02G2375 Ceratophyllum demersum HOM05D000427 ORTHO05D000386 8.4e-32 141.7 163 46.6
PGR031G1608 Punica granatum HOM05D003412 ORTHO05D003962 8.4e-32 141.7 198 47.0
Rhsim11G0101700 Rhododendron simsii HOM05D003412 ORTHO05D003962 3.2e-31 139.8 190 45.3
BcaB04g19713 Brassica carinata HOM05D003412 ORTHO05D003962 2.7e-30 136.7 154 48.7
A09p05660 Brassica napus HOM05D003412 ORTHO05D003962 4.6e-30 136.0 308 34.7
AL3G16570 Arabidopsis lyrata HOM05D003412 ORTHO05D003962 6.7e-29 132.1 165 46.7
Thhalv10021934m.g Eutrema salsugineum HOM05D003412 ORTHO05D003962 1.9e-28 130.6 138 50.0
Sp3g04690 Schrenkiella parvula HOM05D003412 ORTHO05D003962 4.3e-28 129.4 161 46.0
Carub.0003s0519 Capsella rubella HOM05D003412 ORTHO05D003962 1.6e-27 127.5 308 32.8
BcaC05g29778 Brassica carinata HOM05D003412 ORTHO05D003962 3.7e-27 126.3 138 47.8
AT3G05830 Arabidopsis thaliana HOM05D003412 ORTHO05D003962 8.2e-27 125.2 308 32.8
C05p61450 Brassica napus HOM05D003412 ORTHO05D003962 7.6e-25 118.6 308 31.2
BcaC05g30086 Brassica carinata HOM05D003412 ORTHO05D003962 2.9e-24 116.7 161 42.9
CSS0037128 Camellia sinensis var. sinensis HOM05D003412 ORTHO05D003962 2.5e-23 113.6 213 39.4
A05p42230 Brassica napus HOM05D003412 ORTHO05D003962 4.2e-23 112.8 161 42.2
BraA05t22941Z Brassica rapa HOM05D003412 ORTHO05D003962 5.5e-23 112.5 168 41.7
BolC5t34803H Brassica oleracea HOM05D003412 ORTHO05D003962 1.2e-22 111.3 168 41.1
AT1G09483 Arabidopsis thaliana HOM05D003412 ORTHO05D003962 8.7e-21 105.1 103 54.4
Os01g0292700 Oryza sativa ssp. japonica HOM05D003412 ORTHO05D003962 3.7e-19 99.8 303 32.7
Zm00001eb129850 Zea mays HOM05D003412 ORTHO05D003962 7.2e-15 85.5 301 28.9
Mapoly0116s0017 Marchantia polymorpha HOM05D003412 ORTHO05D003962 3.6e-14 83.2 226 31.0
Zm00001eb075980 Zea mays HOM05D003412 ORTHO05D003962 4.8e-11 72.8 143 41.3
unitig_26.g8997 Utricularia gibba HOM05D003412 ORTHO05D003962 6.9e-10 68.9 221 31.2


User provided reference genes

Program Settings