Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 8.2e-106 387.1 202 100.0
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 4.1e-73 278.5 193 78.2
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 1.4e-68 263.5 196 70.9
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 3.1e-68 262.3 196 73.5
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 3.4e-67 258.8 196 69.9
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.3e-66 256.9 196 73.5
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 6.4e-66 254.6 198 67.7
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.4e-65 253.4 196 71.9
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 2.4e-65 252.7 197 68.5
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 3.2e-65 252.3 181 74.0
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 7.0e-65 251.1 196 69.9
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.2e-64 250.4 186 71.0
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 2.0e-64 249.6 198 68.2
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 1.0e-63 247.3 185 69.7
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 3.0e-63 245.7 195 67.7
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 3.9e-63 245.4 196 68.9
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 8.6e-63 244.2 197 68.0
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 1.5e-62 243.4 198 67.7
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 1.9e-62 243.0 187 69.0
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 1.9e-62 243.0 174 71.3
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 3.3e-62 242.3 188 67.6
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 9.5e-62 240.7 179 69.8
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 1.6e-61 240.0 177 70.6
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 2.8e-61 239.2 151 81.5
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 3.6e-61 238.8 195 65.6
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 6.2e-61 238.0 158 76.6
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 6.2e-61 238.0 168 73.8
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 8.0e-61 237.7 179 70.9
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 1.4e-60 236.9 168 73.2
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 2.3e-60 236.1 193 64.8
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 2.3e-60 236.1 168 72.6
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 3.1e-60 235.7 158 76.6
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 3.1e-60 235.7 186 66.7
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 3.1e-60 235.7 154 77.9
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 5.2e-60 235.0 191 65.4
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 6.8e-60 234.6 193 67.9
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 1.2e-59 233.8 198 65.2
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 1.5e-59 233.4 156 75.0
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 4.4e-59 231.9 156 74.4
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 1.3e-58 230.3 201 61.2
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 1.7e-58 229.9 154 77.3
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.2e-58 229.6 213 62.0
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 2.9e-58 229.2 157 77.1
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 3.7e-58 228.8 142 81.0
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 3.7e-58 228.8 141 80.1
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 4.9e-58 228.4 157 76.4
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.9e-58 228.4 213 61.0
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 6.4e-58 228.0 183 67.8
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 1.1e-57 227.3 139 82.7
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 1.9e-57 226.5 150 76.7
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 2.4e-57 226.1 142 79.6
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 2.4e-57 226.1 197 62.4
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 2.4e-57 226.1 159 71.7
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 1.6e-56 223.4 191 65.4
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 4.6e-56 221.9 172 69.2
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 6.0e-56 221.5 147 79.6
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 7.8e-56 221.1 183 66.1
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 1.0e-55 220.7 186 64.5
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 1.3e-55 220.3 192 63.0
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 1.7e-55 219.9 209 59.3
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 2.3e-55 219.5 157 72.6
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 3.0e-55 219.2 145 78.6
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 6.6e-55 218.0 142 78.2
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 6.6e-55 218.0 209 59.3
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 6.6e-55 218.0 209 58.9
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 6.6e-55 218.0 198 60.1
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 8.6e-55 217.6 134 82.8
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 8.6e-55 217.6 191 64.4
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 1.1e-54 217.2 176 65.3
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 1.1e-54 217.2 159 69.2
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 1.9e-54 216.5 160 70.6
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 3.3e-54 215.7 134 81.3
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 2.8e-53 212.6 133 81.2
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 2.8e-53 212.6 160 69.4
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 2.8e-53 212.6 133 81.2
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 2.8e-53 212.6 133 81.2
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 2.8e-53 212.6 160 69.4
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 2.8e-53 212.6 142 76.8
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 2.3e-52 209.5 163 68.1
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 5.2e-52 208.4 205 57.6
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 6.8e-52 208.0 124 83.1
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 2.0e-51 206.5 190 63.2
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 3.4e-51 205.7 153 71.2
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 1.4e-49 200.3 117 85.5
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 6.0e-48 194.9 140 72.1
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 1.0e-47 194.1 128 72.7
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 2.3e-47 193.0 128 73.4
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 4.7e-45 185.3 149 67.1
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 1.5e-43 180.3 104 87.5
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 2.6e-43 179.5 104 87.5
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 4.9e-42 175.3 122 70.5
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 1.6e-40 170.2 102 86.3
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 1.3e-39 167.2 97 88.7
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 2.3e-39 166.4 103 79.6
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 2.3e-39 166.4 105 81.9
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 2.5e-38 162.9 106 75.5
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 2.8e-37 159.5 105 74.3
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 3.4e-35 152.5 123 66.7
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 2.9e-34 149.4 204 48.0
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 7.1e-33 144.8 150 58.0
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 1.0e-31 141.0 106 67.0
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 1.9e-30 136.7 103 69.9
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 1.3e-29 134.0 126 54.0
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 3.6e-29 132.5 124 55.6
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 1.4e-28 130.6 79 83.5
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 3.1e-28 129.4 199 43.7
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 4.9e-26 122.1 71 91.5
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 4.9e-26 122.1 71 91.5
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 1.9e-25 120.2 79 73.4
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 1.3e-23 114.0 135 51.9
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 9.6e-22 107.8 76 69.7
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 2.1e-21 106.7 63 82.5
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 2.6e-19 99.8 86 59.3
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 2.1e-16 90.1 109 39.4
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 8.4e-10 68.2 39 79.5
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 8.4e-10 68.2 39 79.5


User provided reference genes

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