Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02726 Aquilegia oxysepala HOM05D000300 ORTHO05D000383 2.9e-82 308.5 158 100.0
Aqoxy3G02670 Aquilegia oxysepala HOM05D000300 ORTHO05D000383 2.9e-58 228.8 127 96.1
TAR375G0674 Trochodendron aralioides HOM05D000300 ORTHO05D000383 6.8e-23 111.3 133 54.1
Nn1g00783 Nelumbo nucifera HOM05D000300 ORTHO05D000383 1.9e-20 103.2 117 50.4
Cfa011051 Carpinus fangiana HOM05D000300 ORTHO05D000383 1.3e-18 97.1 94 47.9
Eucgr.D01216 Eucalyptus grandis HOM05D000300 ORTHO05D000383 2.3e-18 96.3 76 56.6
MELO3C006227.2 Cucumis melo HOM05D000300 ORTHO05D000383 3.9e-18 95.5 76 56.6
Sed0016119 Sechium edule HOM05D000300 ORTHO05D000383 3.9e-18 95.5 76 56.6
CsaV3_3G010060 Cucumis sativus L. HOM05D000300 ORTHO05D000383 1.1e-17 94.0 76 55.3
Gohir.A08G057500 Gossypium hirsutum HOM05D000300 ORTHO05D000383 1.5e-17 93.6 94 45.7
Gohir.D08G066800 Gossypium hirsutum HOM05D000300 ORTHO05D000383 1.5e-17 93.6 94 45.7
Gorai.004G069400 Gossypium raimondii HOM05D000300 ORTHO05D000383 1.5e-17 93.6 94 45.7
Potri.002G139400 Populus trichocarpa HOM05D000300 ORTHO05D000383 1.5e-17 93.6 76 53.9
Sabra02G0108500 Salix brachista HOM05D000300 ORTHO05D000383 1.9e-17 93.2 76 53.9
Ah.05g177980 Amaranthus hybridus HOM05D000300 ORTHO05D000383 3.3e-17 92.4 132 45.5
CSS0023456 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 3.3e-17 92.4 140 42.1
Hma1.2p1_0622F.1_g190880 Hydrangea macrophylla HOM05D000300 ORTHO05D000383 3.3e-17 92.4 135 45.9
QL04p029061 Quercus lobata HOM05D000300 ORTHO05D000383 3.3e-17 92.4 76 52.6
Medtr8g031520 Medicago truncatula HOM05D000300 ORTHO05D000383 4.3e-17 92.0 76 53.9
Haze_02868 Corylus avellana HOM05D000300 ORTHO05D000383 5.6e-17 91.7 73 57.5
Ciclev10019658m.g Citrus clementina HOM05D000300 ORTHO05D000383 7.3e-17 91.3 76 52.6
COL.COLO4_12385 Corchorus olitorius HOM05D006213 ORTHO05D008107 7.3e-17 91.3 94 44.7
DCAR_025055 Daucus carota HOM05D000300 ORTHO05D000383 9.5e-17 90.9 134 45.5
TWI14G1082 Tripterygium wilfordii HOM05D000300 ORTHO05D000383 9.5e-17 90.9 94 45.7
CANSAT25G2881 Cannabis sativa HOM05D000300 ORTHO05D000383 1.2e-16 90.5 129 41.9
Sabra14G0035700 Salix brachista HOM05D000300 ORTHO05D000383 1.2e-16 90.5 136 40.4
Sabra14G0037800 Salix brachista HOM05D000300 ORTHO05D000383 1.2e-16 90.5 136 40.4
EL10Ac1g00744 Beta vulgaris HOM05D000300 ORTHO05D000383 1.6e-16 90.1 132 43.2
Manes.01G273600 Manihot esculenta HOM05D000300 ORTHO05D000383 1.6e-16 90.1 76 52.6
Potri.014G050300 Populus trichocarpa HOM05D000300 ORTHO05D000383 1.6e-16 90.1 131 38.9
Sc26g0001670 Simmondsia chinensis HOM05D000300 ORTHO05D000383 1.6e-16 90.1 66 56.1
Ca_14392_v3 Cicer arietinum L. HOM05D000300 ORTHO05D000383 4.7e-16 88.6 129 43.4
Medtr8g007365 Medicago truncatula HOM05D000300 ORTHO05D000383 4.7e-16 88.6 74 54.1
Ca_14795_v3 Cicer arietinum L. HOM05D000300 ORTHO05D000383 6.2e-16 88.2 131 43.5
PGR004G0466 Punica granatum HOM05D000300 ORTHO05D000383 6.2e-16 88.2 151 39.7
Cpa.g.sc41.84 Carica papaya HOM05D000300 ORTHO05D000383 8.1e-16 87.8 76 47.4
ClCG05G002610 Citrullus lanatus HOM05D000300 ORTHO05D000383 8.1e-16 87.8 134 41.0
TPR.G32144 Trifolium pratense HOM05D000300 ORTHO05D000383 1.1e-15 87.4 122 45.1
arahy.Tifrunner.gnm1.ann1.4H476I Arachis hypogaea HOM05D000300 ORTHO05D000383 1.4e-15 87.0 75 50.7
Lj3g0006464 Lotus japonicus HOM05D000300 ORTHO05D000383 1.4e-15 87.0 120 42.5
Lj2g0018249 Lotus japonicus HOM05D000300 ORTHO05D000383 1.8e-15 86.7 120 42.5
Aa31LG1G11560 Aethionema arabicum HOM05D000300 ORTHO05D000383 2.3e-15 86.3 76 48.7
arahy.Tifrunner.gnm1.ann1.F6LU9D Arachis hypogaea HOM05D000300 ORTHO05D000383 2.3e-15 86.3 75 49.3
QL02p009783 Quercus lobata HOM05D000300 ORTHO05D000383 3.1e-15 85.9 77 49.4
Thecc.01G397900 Theobroma cacao HOM05D000300 ORTHO05D000383 3.1e-15 85.9 133 42.9
Lsat_1_v5_gn_1_82301 Lactuca sativa HOM05D000300 ORTHO05D000383 4.0e-15 85.5 92 45.7
Oeu037438.2 Olea europaea HOM05D000300 ORTHO05D000383 5.2e-15 85.1 73 46.6
Atru.BG.60.p Acer truncatum HOM05D000300 ORTHO05D000383 6.8e-15 84.7 75 49.3
FAN03G1915 Fragaria x ananassa HOM05D000300 ORTHO05D000383 6.8e-15 84.7 149 38.9
RcHm_v2.0_Chr1g0346001 Rosa chinensis HOM05D000300 ORTHO05D000383 6.8e-15 84.7 91 45.1
MSTRG.20673 Avicennia marina HOM05D000300 ORTHO05D000383 8.9e-15 84.3 139 36.0
Manes.05G056400 Manihot esculenta HOM05D000300 ORTHO05D000383 1.2e-14 84.0 149 40.9
Nitab4.5_0000563g0220 Nicotiana tabacum HOM05D000300 ORTHO05D000383 1.2e-14 84.0 134 40.3
SalBow5G2486 Salvia bowleyana HOM05D000300 ORTHO05D000383 1.2e-14 84.0 74 51.4
SGA_v2.0_scaffold340G49333 Striga asiatica HOM05D000300 ORTHO05D000383 1.5e-14 83.6 117 41.0
Hma1.2p1_1623F.1_g294120 Hydrangea macrophylla HOM05D000300 ORTHO05D000383 2.0e-14 83.2 133 42.9
Glyma.03G108100 Glycine max HOM05D000300 ORTHO05D000383 2.6e-14 82.8 76 47.4
Sed0001468 Sechium edule HOM05D000300 ORTHO05D000383 2.6e-14 82.8 133 40.6
Migut.B01507 Erythranthe guttata HOM05D000300 ORTHO05D000383 3.4e-14 82.4 76 47.4
MD02G1219200 Malus domestica HOM05D000300 ORTHO05D000383 3.4e-14 82.4 76 44.7
MD07G1097800 Malus domestica HOM05D000300 ORTHO05D000383 3.4e-14 82.4 76 44.7
Prupe.2G121900 Prunus persica HOM05D000300 ORTHO05D000383 3.4e-14 82.4 76 44.7
CAN.G1585.5 Capsicum annuum HOM05D000300 ORTHO05D000383 4.4e-14 82.0 135 38.5
Duzib138G0977 Durio zibethinus HOM05D000300 ORTHO05D000383 4.4e-14 82.0 133 36.1
Solyc01g089870.3 Solanum lycopersicum HOM05D000300 ORTHO05D000383 4.4e-14 82.0 120 40.0
Sopen01g035710 Solanum pennellii HOM05D000300 ORTHO05D000383 4.4e-14 82.0 120 40.0
VMungo0331G0487 Vigna mungo HOM05D000300 ORTHO05D000383 4.4e-14 82.0 123 39.8
Oeu019258.1 Olea europaea HOM05D000300 ORTHO05D000383 5.8e-14 81.6 138 37.7
FvH4_7g09350 Fragaria vesca HOM05D000300 ORTHO05D000383 7.5e-14 81.3 150 38.0
TPR.G32158 Trifolium pratense HOM05D000300 ORTHO05D000383 7.5e-14 81.3 129 43.4
AT1G02150 Arabidopsis thaliana HOM05D000300 ORTHO05D000383 9.8e-14 80.9 130 37.7
Carub.0001s0003 Capsella rubella HOM05D000300 ORTHO05D000383 9.8e-14 80.9 76 46.1
FAN01G0489 Fragaria x ananassa HOM05D000300 ORTHO05D000383 9.8e-14 80.9 149 36.9
FAN10G1908 Fragaria x ananassa HOM05D000300 ORTHO05D000383 9.8e-14 80.9 150 38.0
CDE04G3505 Ceratophyllum demersum HOM05D000300 ORTHO05D000383 1.3e-13 80.5 128 39.1
Peaxi162Scf00853g00422 Petunia axillaris HOM05D000300 ORTHO05D000383 1.7e-13 80.1 133 39.8
PGSC0003DMG400031170 Solanum tuberosum HOM05D000300 ORTHO05D000383 1.7e-13 80.1 120 39.2
FAN10G1019 Fragaria x ananassa HOM05D000300 ORTHO05D000383 2.2e-13 79.7 132 40.2
A10p00080 Brassica napus HOM05D000300 ORTHO05D000383 2.9e-13 79.3 120 36.7
BraA10t42286Z Brassica rapa HOM05D000300 ORTHO05D000383 2.9e-13 79.3 120 36.7
C05p00050 Brassica napus HOM05D000300 ORTHO05D000383 3.7e-13 79.0 138 32.6
HanXRQChr11g0344091 Helianthus annuus HOM05D000300 ORTHO05D000383 3.7e-13 79.0 75 48.0
unitig_750.g28409 Utricularia gibba HOM05D000976 ORTHO05D000383 3.7e-13 79.0 76 44.7
Thhalv10007383m.g Eutrema salsugineum HOM05D000300 ORTHO05D000383 4.9e-13 78.6 117 38.5
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 6.4e-13 78.2 120 35.8
BolC5t28792H Brassica oleracea HOM05D000300 ORTHO05D000383 6.4e-13 78.2 120 35.8
PSO063G2780 Papaver somniferum HOM05D000300 ORTHO05D000383 6.4e-13 78.2 123 40.7
Sp1g00100 Schrenkiella parvula HOM05D000300 ORTHO05D000383 6.4e-13 78.2 116 39.7
vmacro13512 Vaccinium macrocarpon HOM05D000300 ORTHO05D000383 6.4e-13 78.2 135 40.0
Actinidia05776 Actinidia chinensis HOM05D000300 ORTHO05D000383 8.3e-13 77.8 59 55.9
Duzib268G0370 Durio zibethinus HOM05D000300 ORTHO05D000383 8.3e-13 77.8 75 44.0
Lalb_Chr12g0210471 Lupinus albus HOM05D000300 ORTHO05D000383 8.3e-13 77.8 132 35.6
AL1G10070 Arabidopsis lyrata HOM05D000300 ORTHO05D000383 1.4e-12 77.0 119 37.8
Glyma.07G119200 Glycine max HOM05D000300 ORTHO05D000383 2.4e-12 76.3 126 39.7
Lj9C554G0 Lonicera japonica HOM05D000300 ORTHO05D000383 2.4e-12 76.3 74 47.3
PSO782G5511 Papaver somniferum HOM05D000300 ORTHO05D000383 2.4e-12 76.3 68 52.9
Rhsim07G0037800 Rhododendron simsii HOM05D000300 ORTHO05D000383 2.4e-12 76.3 128 41.4
CANSAT25G1191 Cannabis sativa HOM05D000300 ORTHO05D000383 3.2e-12 75.9 129 38.8
ECA234G2079 Erigeron canadensis HOM05D006213 ORTHO05D008107 3.2e-12 75.9 103 37.9
Hund17107 Selenicereus undatus HOM05D000300 ORTHO05D000383 3.2e-12 75.9 82 45.1
CARHR000170 Cardamine hirsuta HOM05D000300 ORTHO05D000383 4.1e-12 75.5 115 37.4
ECA248G3482 Erigeron canadensis HOM05D000300 ORTHO05D000383 4.1e-12 75.5 68 50.0
SGA_v2.0_scaffold340G49335 Striga asiatica HOM05D000300 ORTHO05D000383 4.1e-12 75.5 76 46.1
Phvul.010G045500 Phaseolus vulgaris HOM05D000300 ORTHO05D000383 9.2e-12 74.3 123 36.6
FAN06G0367 Fragaria x ananassa HOM05D001878 ORTHO05D001737 1.2e-11 73.9 129 39.5
HanXRQChr17g0562551 Helianthus annuus HOM05D000300 ORTHO05D000383 1.2e-11 73.9 135 41.5
GSVIVG01018303001 Vitis vinifera HOM05D000300 ORTHO05D000383 6.0e-11 71.6 47 66.0
CiPaw.13G024800 Carya illinoinensis HOM05D000300 ORTHO05D000383 1.0e-10 70.9 48 66.7
CiPaw.14G019400 Carya illinoinensis HOM05D000300 ORTHO05D000383 1.0e-10 70.9 48 66.7
ATR0665G093 Amborella trichopoda HOM05D000300 ORTHO05D000383 2.3e-10 69.7 75 46.7
HanXRQChr16g0521181 Helianthus annuus HOM05D000300 ORTHO05D000383 2.3e-10 69.7 95 38.9
vmacro13513 Vaccinium macrocarpon HOM05D000300 ORTHO05D000383 2.3e-10 69.7 134 36.6
Lsat_1_v5_gn_4_39241 Lactuca sativa HOM05D000300 ORTHO05D000383 3.9e-10 68.9 130 35.4
Dinv44046 Davidia involucrata HOM05D000300 ORTHO05D000383 5.1e-10 68.6 47 63.8
THA.LOC104814062 Tarenaya hassleriana HOM05D000300 ORTHO05D000383 1.9e-09 66.6 116 31.9
Cc02_g25250 Coffea canephora HOM05D000300 ORTHO05D000383 1.2e-08 63.9 47 59.6
Hund17108 Selenicereus undatus HOM05D000300 ORTHO05D000383 1.2e-08 63.9 115 38.3
HPP92_001535 Vanilla planifolia HOM05D000300 ORTHO05D000383 1.2e-08 63.9 60 48.3
Nitab4.5_0007060g0020 Nicotiana tabacum HOM05D000300 ORTHO05D000383 1.6e-08 63.5 43 67.4
arahy.Tifrunner.gnm1.ann1.FFNM3A Arachis hypogaea HOM05D000300 ORTHO05D000383 8.1e-08 61.2 123 34.1
arahy.Tifrunner.gnm1.ann1.U2HF56 Arachis hypogaea HOM05D000300 ORTHO05D000383 8.1e-08 61.2 123 34.1
Oeu000004.1 Olea europaea HOM05D000300 ORTHO05D000383 8.1e-08 61.2 42 61.9
SGA_v2.0_scaffold52G19250 Striga asiatica HOM05D000300 ORTHO05D000383 8.1e-08 61.2 66 36.4
SGA_v2.0_scaffold52G19248 Striga asiatica HOM05D000300 ORTHO05D000383 1.4e-07 60.5 73 35.6
SGA_v2.0_scaffold52G19251 Striga asiatica HOM05D000300 ORTHO05D000383 1.8e-07 60.1 65 35.4
SGA_v2.0_scaffold52G19244 Striga asiatica HOM05D006213 ORTHO05D008107 1.2e-06 57.4 97 26.8
Lj7A548T51 Lonicera japonica HOM05D000300 ORTHO05D000383 4.4e-06 55.5 147 30.6
ATR0598G167 Amborella trichopoda HOM05D000300 ORTHO05D000383 5.8e-06 55.1 83 36.1


User provided reference genes

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