Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 3.9e-263 911.0 479 100.0
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 6.1e-184 647.9 478 71.5
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 1.7e-178 629.8 480 69.8
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 1.1e-177 627.1 481 70.5
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 1.6e-168 596.7 480 66.9
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 1.8e-167 593.2 481 66.3
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 5.2e-167 591.7 481 66.5
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 6.8e-167 591.3 480 66.7
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 8.9e-167 590.9 480 66.7
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 9.8e-166 587.4 480 66.0
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 3.7e-165 585.5 481 65.5
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 1.9e-164 583.2 481 67.6
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 7.0e-164 581.3 480 66.9
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 2.7e-163 579.3 481 65.9
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 8.6e-162 574.3 480 64.8
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 8.6e-162 574.3 444 69.8
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 7.3e-161 571.2 507 62.3
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 3.6e-160 568.9 476 64.3
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 3.6e-160 568.9 482 63.9
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 1.8e-159 566.6 480 63.8
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 2.3e-159 566.2 482 63.7
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 3.1e-159 565.8 482 63.7
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 4.0e-159 565.5 480 64.2
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 5.2e-159 565.1 480 62.9
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.5e-158 563.5 480 63.8
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.6e-158 562.8 480 63.8
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.6e-158 562.8 480 63.8
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 3.4e-158 562.4 481 64.2
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.3e-157 560.5 480 63.3
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 3.7e-157 558.9 480 63.5
DCAR_002882 Daucus carota HOM05D005852 ORTHO05D006688 1.1e-156 557.4 480 62.9
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 3.2e-156 555.8 480 63.1
Nitab4.5_0000312g0040 Nicotiana tabacum HOM05D005852 ORTHO05D006688 5.4e-156 555.1 532 58.5
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 7.1e-156 554.7 482 62.7
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 7.1e-156 554.7 500 61.8
Cc08_g12410 Coffea canephora HOM05D005852 ORTHO05D006688 6.0e-155 551.6 482 62.7
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 1.5e-153 547.0 500 61.2
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 2.5e-153 546.2 488 61.9
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 3.6e-152 542.3 480 64.6
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 1.1e-151 540.8 480 63.1
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 1.4e-151 540.4 480 64.4
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 5.2e-151 538.5 480 61.0
Nitab4.5_0014313g0030 Nicotiana tabacum HOM05D005852 ORTHO05D006688 1.2e-150 537.3 489 60.7
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 1.5e-150 537.0 480 60.8
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 1.5e-150 537.0 479 60.1
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 2.0e-150 536.6 542 57.7
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 1.3e-149 533.9 481 61.5
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 1.7e-149 533.5 479 59.7
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 1.9e-148 530.0 483 61.1
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 5.4e-148 528.5 555 56.6
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 2.7e-147 526.2 498 60.2
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 3.5e-147 525.8 523 56.8
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 1.3e-146 523.9 510 56.7
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 1.7e-146 523.5 481 61.5
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 3.0e-146 522.7 480 60.6
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 6.6e-146 521.5 555 55.9
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 9.6e-145 517.7 502 58.4
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 2.1e-144 516.5 483 61.1
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 2.1e-144 516.5 510 57.1
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 8.1e-144 514.6 440 65.2
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 1.8e-143 513.5 512 60.5
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 1.8e-143 513.5 481 59.5
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 2.6e-142 509.6 483 59.6
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 1.2e-139 500.7 494 59.1
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 6.0e-139 498.4 492 57.9
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 1.0e-138 497.7 512 54.9
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 3.9e-138 495.7 480 57.7
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 5.6e-137 491.9 494 55.7
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 2.2e-133 479.9 482 57.7
TAR365G0405 Trochodendron aralioides HOM05D005852 ORTHO05D006688 6.4e-133 478.4 432 62.0
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 2.1e-131 473.4 484 57.9
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 3.3e-129 466.1 507 55.0
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 2.1e-128 463.4 490 54.1
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 6.2e-128 461.8 527 53.3
Lj1A15T56 Lonicera japonica HOM05D005852 ORTHO05D006688 6.2e-128 461.8 486 57.6
MSTRG.25523 Avicennia marina HOM05D005852 ORTHO05D006688 5.3e-127 458.8 482 55.6
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 4.9e-125 452.2 474 55.3
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 4.2e-124 449.1 481 55.9
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 5.5e-124 448.7 474 56.5
ECA247G2785 Erigeron canadensis HOM05D005852 ORTHO05D006688 1.2e-123 447.6 483 53.8
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 1.6e-123 447.2 499 52.7
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 2.1e-123 446.8 499 55.5
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 3.9e-122 442.6 482 55.2
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 3.9e-122 442.6 355 66.8
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 8.7e-122 441.4 483 53.4
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 5.6e-121 438.7 481 54.1
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 9.6e-121 438.0 483 53.8
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 1.6e-120 437.2 482 54.8
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 1.6e-120 437.2 488 53.7
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 1.6e-120 437.2 355 66.2
TAR633G0114 Trochodendron aralioides HOM05D005852 ORTHO05D006688 2.4e-119 433.3 322 73.9
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 6.9e-119 431.8 364 65.9
CARHR172660 Cardamine hirsuta HOM05D005852 ORTHO05D006688 1.5e-118 430.6 484 54.8
A09p54330 Brassica napus HOM05D005852 ORTHO05D006688 2.6e-118 429.9 489 52.6
SGA_v2.0_scaffold146G36149 Striga asiatica HOM05D005852 ORTHO05D006688 8.4e-117 424.9 431 58.7
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 1.2e-115 421.0 566 48.4
Lsat_1_v5_gn_8_166621 Lactuca sativa HOM05D005852 ORTHO05D006688 1.6e-115 420.6 490 54.5
BolC8t51298H Brassica oleracea HOM05D005852 ORTHO05D006688 6.0e-115 418.7 496 52.2
BraA09t40845Z Brassica rapa HOM05D005852 ORTHO05D006688 5.1e-114 415.6 515 50.9
C08p37210 Brassica napus HOM05D005852 ORTHO05D006688 2.1e-112 410.2 500 51.2
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 5.0e-109 399.1 529 47.6
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 1.9e-108 397.1 563 46.0
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 6.1e-107 392.1 526 47.7
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 7.9e-107 391.7 538 47.6
unitig_21.g20328 Utricularia gibba HOM05D005852 ORTHO05D006688 3.9e-106 389.4 423 54.4
Gohir.A07G129400 Gossypium hirsutum HOM05D005852 ORTHO05D006688 6.5e-93 345.5 332 59.0
CiPaw.07G119700 Carya illinoinensis HOM05D005852 ORTHO05D006688 6.3e-88 328.9 255 71.0
HPP92_012784 Vanilla planifolia HOM05D005852 ORTHO05D006688 7.5e-73 278.9 367 45.2
Nn3g21757 Nelumbo nucifera HOM05D005852 ORTHO05D006688 2.7e-70 270.4 169 78.1
C02p35770 Brassica napus HOM05D005852 ORTHO05D006688 1.0e-66 258.5 190 71.1
C02p58000 Brassica napus HOM05D005852 ORTHO05D006688 3.0e-66 256.9 190 70.5
Os01g0252900 Oryza sativa ssp. japonica HOM05D005852 ORTHO05D006688 9.8e-65 251.9 257 56.0
BolC2t11869H Brassica oleracea HOM05D005852 ORTHO05D006688 4.9e-64 249.6 190 69.5
Zm00001eb333730 Zea mays HOM05D005852 ORTHO05D006688 8.3e-64 248.8 265 53.6
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 7.7e-62 242.3 485 36.1
Hma1.2p1_0055F.1_g031510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 1.0e-58 231.9 236 55.1
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 5.9e-54 216.1 498 35.5
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 1.5e-52 211.5 479 32.8
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 8.3e-48 195.7 406 39.4
AUR62032106 Chenopodium quinoa HOM05D005852 ORTHO05D006688 5.0e-45 186.4 376 35.6
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 1.4e-42 178.3 440 35.5
CDE08G0400 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 1.6e-38 164.9 171 55.0
Pp3c1_21140 Physcomitrium patens HOM05D005852 ORTHO05D006688 1.5e-36 158.3 460 32.8
Pp3c2_16330 Physcomitrium patens HOM05D005852 ORTHO05D006688 4.3e-36 156.8 495 32.3
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 1.5e-33 148.3 483 31.3
BcaNung00812 Brassica carinata HOM05D005852 ORTHO05D006688 4.1e-31 140.2 101 72.3
Actinidia20978 Actinidia chinensis HOM05D005852 ORTHO05D006688 7.3e-28 129.4 145 49.7
Nn3g21758 Nelumbo nucifera HOM05D005852 ORTHO05D006688 1.6e-27 128.3 125 55.2
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 1.1e-26 125.6 459 30.3
SGA_v2.0_scaffold120G32887 Striga asiatica HOM05D005852 ORTHO05D006688 4.4e-25 120.2 165 43.0
BolC5t33669H Brassica oleracea HOM05D005852 ORTHO05D006688 3.6e-19 100.5 81 65.4
Lsat_1_v5_gn_3_89981 Lactuca sativa HOM05D005852 ORTHO05D006688 6.2e-11 73.2 41 80.5
HPP92_012783 Vanilla planifolia HOM05D005852 ORTHO05D006688 2.1e-06 58.2 91 45.1


User provided reference genes

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