Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 5.2e-179 630.9 320 100.0
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 9.6e-133 477.2 306 75.5
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 2.1e-132 476.1 318 73.0
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 8.1e-132 474.2 314 74.2
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 1.7e-129 466.5 290 76.6
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 1.1e-128 463.8 309 72.8
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 1.9e-128 463.0 300 73.3
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 5.4e-128 461.5 261 81.6
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 9.3e-128 460.7 291 73.9
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 7.8e-127 457.6 300 73.0
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 1.0e-126 457.2 317 69.1
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 1.7e-126 456.4 300 73.0
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 2.3e-126 456.1 318 69.5
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 6.6e-126 454.5 309 70.6
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 6.6e-126 454.5 300 72.3
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 6.6e-126 454.5 313 70.0
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 1.1e-125 453.8 300 71.7
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 1.9e-125 453.0 305 71.1
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 3.3e-125 452.2 304 71.4
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 4.3e-125 451.8 318 70.1
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 1.6e-124 449.9 290 73.4
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 2.1e-124 449.5 308 69.8
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 2.8e-124 449.1 311 68.8
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 2.8e-124 449.1 307 70.4
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 2.8e-124 449.1 318 70.4
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 3.6e-124 448.7 290 72.4
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 4.8e-124 448.4 313 69.0
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 1.8e-123 446.4 311 68.8
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 2.4e-123 446.0 305 70.2
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 2.4e-123 446.0 310 69.7
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 3.1e-123 445.7 309 68.6
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 3.1e-123 445.7 259 79.9
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 4.0e-123 445.3 290 72.4
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 4.0e-123 445.3 294 71.8
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 6.9e-123 444.5 311 67.8
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 6.9e-123 444.5 311 67.8
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 9.0e-123 444.1 291 71.8
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 1.2e-122 443.7 263 77.2
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 1.2e-122 443.7 307 70.0
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 3.4e-122 442.2 291 73.5
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 3.4e-122 442.2 310 69.7
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 3.4e-122 442.2 308 69.2
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 3.4e-122 442.2 318 67.0
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 4.5e-122 441.8 313 69.6
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 4.5e-122 441.8 314 67.8
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 5.8e-122 441.4 309 68.6
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 5.8e-122 441.4 308 68.5
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 7.6e-122 441.0 311 67.8
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 7.6e-122 441.0 316 67.4
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 7.6e-122 441.0 259 78.8
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 9.9e-122 440.7 310 69.7
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 1.7e-121 439.9 288 70.5
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 1.7e-121 439.9 313 68.7
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 3.8e-121 438.7 259 78.8
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 8.4e-121 437.6 316 68.0
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 1.4e-120 436.8 312 68.3
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 2.4e-120 436.0 292 69.5
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 7.1e-120 434.5 316 67.1
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 9.3e-120 434.1 316 67.1
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 9.3e-120 434.1 316 66.8
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 1.6e-119 433.3 292 71.6
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 2.1e-119 433.0 291 73.2
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 2.7e-119 432.6 290 71.0
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 6.0e-119 431.4 314 67.8
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 6.0e-119 431.4 312 66.3
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 1.0e-118 430.6 263 76.8
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 1.8e-118 429.9 308 65.9
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 8.7e-118 427.6 290 68.6
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 1.1e-117 427.2 317 66.9
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 2.5e-117 426.0 318 66.4
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 3.3e-117 425.6 312 67.9
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 1.3e-116 423.7 335 64.2
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 1.6e-116 423.3 306 67.6
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 1.6e-116 423.3 316 63.9
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 3.6e-116 422.2 261 73.6
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 6.2e-116 421.4 312 65.1
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 1.8e-115 419.9 263 73.0
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 3.1e-115 419.1 298 67.4
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 5.3e-115 418.3 315 66.0
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 6.9e-115 417.9 316 64.6
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 6.9e-115 417.9 305 63.3
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 2.0e-114 416.4 314 65.0
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 7.6e-114 414.5 309 65.0
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 9.9e-114 414.1 290 68.3
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 1.3e-113 413.7 314 65.9
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 3.0e-110 402.5 411 52.3
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 3.0e-110 402.5 261 72.0
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 1.5e-109 400.2 247 76.1
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 2.5e-109 399.4 320 63.4
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 2.1e-108 396.4 232 78.0
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 9.0e-107 391.0 295 65.8
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 4.2e-104 382.1 344 57.6
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 7.1e-104 381.3 292 62.7
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 6.0e-103 378.3 317 60.9
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 6.0e-103 378.3 317 60.9
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 1.8e-102 376.7 283 66.8
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 7.4e-101 371.3 265 66.0
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 2.0e-98 363.2 211 80.6
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 5.9e-98 361.7 222 75.7
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 7.6e-98 361.3 252 67.5
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 7.6e-98 361.3 264 62.1
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 9.7e-93 344.4 210 76.2
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 6.9e-91 338.2 245 67.8
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 2.9e-89 332.8 241 68.9
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 6.5e-89 331.6 201 78.6
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 8.5e-89 331.3 190 80.5
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 1.4e-88 330.5 201 77.1
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 4.4e-69 265.8 265 50.2
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 1.7e-65 253.8 290 49.0
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 5.0e-65 252.3 259 49.8
Potri.001G150800 Populus trichocarpa HOM05D006150 ORTHO05D007745 4.4e-61 239.2 203 59.1
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 5.9e-58 228.8 264 48.1
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 3.0e-54 216.5 266 45.5
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 6.8e-46 188.7 284 41.9
Hma1.2p1_0570F.1_g180440 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 8.9e-46 188.3 139 66.9
Sabra01G0120800 Salix brachista HOM05D006150 ORTHO05D007745 2.0e-45 187.2 180 52.8
FAN18G0603 Fragaria x ananassa HOM05D006150 ORTHO05D007745 1.3e-41 174.5 163 57.1
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 5.6e-40 169.1 96 81.2
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 8.3e-36 155.2 163 52.1
PSO717G0125 Papaver somniferum HOM05D006150 ORTHO05D007745 1.3e-33 147.9 113 66.4
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 5.6e-32 142.5 80 77.5
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 2.6e-29 133.7 67 85.1
BcaC01g03436 Brassica carinata HOM05D006150 ORTHO05D007745 2.1e-23 114.0 112 52.7
GSVIVG01021810001 Vitis vinifera HOM05D006150 ORTHO05D007745 3.0e-17 93.6 73 61.6
Cpa.g.sc98.35 Carica papaya HOM05D006150 ORTHO05D007745 7.1e-11 72.4 56 57.1
Oeu040463.1 Olea europaea HOM05D001574 ORTHO05D000708 3.5e-10 70.1 57 63.2
Lsat_1_v5_gn_6_74120 Lactuca sativa HOM05D006150 ORTHO05D233887 1.8e-06 57.8 33 72.7


User provided reference genes

Program Settings