Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02489 Aquilegia oxysepala HOM05D007524 ORTHO05D009475 6.3e-185 650.6 321 100.0
TAR628G0034 Trochodendron aralioides HOM05D007524 ORTHO05D009475 6.5e-113 411.4 339 62.5
PSO017G6978 Papaver somniferum HOM05D007524 ORTHO05D009475 1.6e-108 396.7 337 62.3
Dinv25593 Davidia involucrata HOM05D007524 ORTHO05D009475 9.4e-104 380.9 325 60.9
Hma1.2p1_0057F.1_g032020 Hydrangea macrophylla HOM05D007524 ORTHO05D009475 1.4e-99 367.1 337 56.7
GSVIVG01022414001 Vitis vinifera HOM05D007524 ORTHO05D009475 5.9e-98 361.7 327 56.6
Actinidia07457 Actinidia chinensis HOM05D007524 ORTHO05D009475 4.2e-96 355.5 345 55.1
Duzib248G0930 Durio zibethinus HOM05D007524 ORTHO05D009475 6.1e-95 351.7 327 55.4
MD16G1006200 Malus domestica HOM05D007524 ORTHO05D009475 1.8e-94 350.1 317 56.8
PSO063G3654 Papaver somniferum HOM05D007524 ORTHO05D009475 3.9e-94 349.0 283 65.0
RcHm_v2.0_Chr4g0446351 Rosa chinensis HOM05D007524 ORTHO05D009475 3.9e-94 349.0 317 56.2
Prupe.1G344400 Prunus persica HOM05D007524 ORTHO05D009475 8.8e-94 347.8 305 58.4
Gorai.013G099200 Gossypium raimondii HOM05D007524 ORTHO05D009475 7.4e-93 344.7 341 50.7
Thecc.02G312000 Theobroma cacao HOM05D007524 ORTHO05D009475 3.7e-92 342.4 342 52.0
Sopen01g004060 Solanum pennellii HOM05D007524 ORTHO05D009475 8.2e-92 341.3 341 52.2
Peaxi162Scf00032g00619 Petunia axillaris HOM05D007524 ORTHO05D009475 1.8e-91 340.1 344 52.0
Gohir.A13G091600 Gossypium hirsutum HOM05D007524 ORTHO05D009475 2.4e-91 339.7 342 50.3
Manes.03G082500 Manihot esculenta HOM05D007524 ORTHO05D009475 4.5e-90 335.5 321 54.8
Solyc01g008520.3 Solanum lycopersicum HOM05D007524 ORTHO05D009475 5.9e-90 335.1 341 51.6
FAN07G0447 Fragaria x ananassa HOM05D007524 ORTHO05D009475 2.9e-89 332.8 314 53.8
FvH4_4g36590 Fragaria vesca HOM05D007524 ORTHO05D009475 8.5e-89 331.3 312 54.5
TPR.G21554 Trifolium pratense HOM05D007524 ORTHO05D009475 4.2e-88 328.9 326 52.8
Cc00_g05860 Coffea canephora HOM05D007524 ORTHO05D009475 1.6e-87 327.0 327 49.5
Migut.C01263 Erythranthe guttata HOM05D007524 ORTHO05D009475 2.1e-87 326.6 314 52.2
THA.LOC104818453 Tarenaya hassleriana HOM05D007524 ORTHO05D009475 1.8e-86 323.6 345 49.9
Medtr4g074200 Medicago truncatula HOM05D007524 ORTHO05D009475 3.0e-86 322.8 323 52.0
FAN17G0147 Fragaria x ananassa HOM05D007524 ORTHO05D009475 3.9e-86 322.4 307 54.4
Rhsim08G0000700 Rhododendron simsii HOM05D007524 ORTHO05D009475 8.8e-86 321.2 323 54.8
Sed0011089 Sechium edule HOM05D007524 ORTHO05D009475 2.6e-85 319.7 312 54.5
Atru.chr11.1209 Acer truncatum HOM05D007524 ORTHO05D009475 3.3e-85 319.3 367 47.4
Eucgr.J00844 Eucalyptus grandis HOM05D007524 ORTHO05D009475 4.8e-84 315.5 322 50.3
PGR119G1695 Punica granatum HOM05D007524 ORTHO05D009475 4.8e-84 315.5 327 50.8
Thhalv10005594m.g Eutrema salsugineum HOM05D007524 ORTHO05D009475 1.4e-83 313.9 310 51.6
FAN12G0445 Fragaria x ananassa HOM05D007524 ORTHO05D009475 3.1e-83 312.8 272 57.0
Carub.0008s2532 Capsella rubella HOM05D007524 ORTHO05D009475 1.6e-82 310.5 344 47.7
Nitab4.5_0001747g0050 Nicotiana tabacum HOM05D007524 ORTHO05D009475 3.5e-82 309.3 329 50.5
Haze_11736 Corylus avellana HOM05D007524 ORTHO05D009475 4.5e-82 308.9 378 46.0
ATR0584G209 Amborella trichopoda HOM05D007524 ORTHO05D009475 5.9e-82 308.5 276 56.5
Glyma.11G104200 Glycine max HOM05D007524 ORTHO05D009475 5.9e-82 308.5 318 51.3
Gohir.D13G086900 Gossypium hirsutum HOM05D007524 ORTHO05D009475 1.0e-81 307.8 300 52.0
Lj3g0014826 Lotus japonicus HOM05D007524 ORTHO05D009475 1.0e-81 307.8 328 50.6
A09p08680 Brassica napus HOM05D007524 ORTHO05D009475 2.2e-81 306.6 333 48.3
AUR62039047 Chenopodium quinoa HOM05D007524 ORTHO05D009475 3.8e-81 305.8 317 53.0
Sc06g0003090 Simmondsia chinensis HOM05D007524 ORTHO05D009475 8.5e-81 304.7 333 49.2
BcaC04g23318 Brassica carinata HOM05D007524 ORTHO05D009475 1.1e-80 304.3 341 48.1
MELO3C020032.2 Cucumis melo HOM05D007524 ORTHO05D009475 1.1e-80 304.3 324 48.5
Psat7g173160 Pisum sativum HOM05D007524 ORTHO05D009475 4.2e-80 302.4 300 52.7
BraA09t36516Z Brassica rapa HOM05D007524 ORTHO05D009475 5.5e-80 302.0 336 47.9
C09p09780 Brassica napus HOM05D007524 ORTHO05D009475 7.2e-80 301.6 333 48.3
Nitab4.5_0000825g0060 Nicotiana tabacum HOM05D007524 ORTHO05D009475 9.4e-80 301.2 332 49.1
Sp2g27600 Schrenkiella parvula HOM05D007524 ORTHO05D009475 9.4e-80 301.2 346 46.5
VMungo1127G1744 Vigna mungo HOM05D007524 ORTHO05D009475 9.4e-80 301.2 314 51.3
BcaB04g19971 Brassica carinata HOM05D007524 ORTHO05D009475 2.7e-79 299.7 343 45.8
Glyma.12G029200 Glycine max HOM05D007524 ORTHO05D009475 2.7e-79 299.7 316 50.6
AT5G64520 Arabidopsis thaliana HOM05D007524 ORTHO05D009475 6.1e-79 298.5 343 46.9
AL8G41910 Arabidopsis lyrata HOM05D007524 ORTHO05D009475 1.4e-78 297.4 350 46.6
BolC9t53889H Brassica oleracea HOM05D007524 ORTHO05D009475 1.4e-78 297.4 336 47.9
arahy.Tifrunner.gnm1.ann1.NAL0L4 Arachis hypogaea HOM05D007524 ORTHO05D009475 2.3e-78 296.6 314 50.0
arahy.Tifrunner.gnm1.ann1.SSM27G Arachis hypogaea HOM05D007524 ORTHO05D009475 2.3e-78 296.6 317 50.2
CsaV3_5G013190 Cucumis sativus L. HOM05D007524 ORTHO05D009475 2.3e-78 296.6 310 49.4
CARHR278490 Cardamine hirsuta HOM05D007524 ORTHO05D009475 1.7e-76 290.4 349 45.6
Aa31LG1G17400 Aethionema arabicum HOM05D007524 ORTHO05D009475 7.0e-75 285.0 340 44.4
Lalb_Chr19g0139281 Lupinus albus HOM05D007524 ORTHO05D009475 9.1e-75 284.6 329 48.6
SGA_v2.0_scaffold118G32494 Striga asiatica HOM05D007524 ORTHO05D009475 3.5e-74 282.7 345 43.5
Lsat_1_v5_gn_1_28521 Lactuca sativa HOM05D007524 ORTHO05D009475 1.9e-72 276.9 320 47.2
ECA247G1633 Erigeron canadensis HOM05D007524 ORTHO05D009475 2.7e-71 273.1 329 47.4
Oeu032986.1 Olea europaea HOM05D007524 ORTHO05D009475 6.1e-71 271.9 279 51.6
EL10Ac4g08947 Beta vulgaris HOM05D007524 ORTHO05D009475 1.0e-70 271.2 403 39.7
vmacro18683 Vaccinium macrocarpon HOM05D007524 ORTHO05D009475 1.4e-70 270.8 286 52.4
CANSAT11G0990 Cannabis sativa HOM05D007524 ORTHO05D009475 2.7e-66 256.5 251 53.8
Zm00001eb146450 Zea mays HOM05D007524 ORTHO05D009475 3.8e-65 252.7 328 41.8
Phvul.011G032400 Phaseolus vulgaris HOM05D007524 ORTHO05D009475 6.6e-65 251.9 229 57.2
HanXRQChr04g0100921 Helianthus annuus HOM05D007524 ORTHO05D009475 2.5e-64 250.0 320 45.0
Ca_03043_v3 Cicer arietinum L. HOM05D007524 ORTHO05D009475 2.1e-63 246.9 212 57.5
DCAR_013072 Daucus carota HOM05D007524 ORTHO05D009475 1.8e-62 243.8 316 43.7
Hund06881 Selenicereus undatus HOM05D007524 ORTHO05D009475 4.0e-62 242.7 327 43.1
Nn5g27870 Nelumbo nucifera HOM05D007524 ORTHO05D009475 1.8e-59 233.8 199 60.8
unitig_46.g18111 Utricularia gibba HOM05D007524 ORTHO05D009475 7.0e-59 231.9 318 40.9
Mapoly0070s0006 Marchantia polymorpha HOM05D007524 ORTHO05D009475 5.2e-54 215.7 345 37.1
AUR62004790 Chenopodium quinoa HOM05D007524 ORTHO05D009475 6.8e-54 215.3 322 41.6
CiPaw.06G059700 Carya illinoinensis HOM05D007524 ORTHO05D009475 8.6e-49 198.4 214 49.1
AagrBONN_evm.TU.Sc2ySwM_368.2219 Anthoceros agrestis HOM05D007524 ORTHO05D009475 2.9e-44 183.3 296 38.2
SMO367G0885 Selaginella moellendorffii HOM05D007524 ORTHO05D009475 7.8e-42 175.3 344 33.1
Nn5g27871 Nelumbo nucifera HOM05D007524 ORTHO05D009475 8.1e-39 165.2 109 72.5
Pp3c1_6220 Physcomitrium patens HOM05D007524 ORTHO05D009475 7.6e-37 158.7 332 35.2
PGSC0003DMG401031484 Solanum tuberosum HOM05D007524 ORTHO05D009475 2.2e-36 157.1 121 61.2
CAN.G821.7 Capsicum annuum HOM05D007524 ORTHO05D009475 2.9e-36 156.8 126 60.3
PGSC0003DMG400019097 Solanum tuberosum HOM05D007524 ORTHO05D009475 1.9e-35 154.1 133 55.6
ClCG11G001140 Citrullus lanatus HOM05D007524 ORTHO05D009475 8.6e-33 145.2 110 64.5
COL.COLO4_27673 Corchorus olitorius HOM05D007524 ORTHO05D009475 1.2e-31 141.4 157 47.8
Cpa.g.sc63.24 Carica papaya HOM05D007524 ORTHO05D009475 2.6e-29 133.7 99 63.6
PGSC0003DMG400010497 Solanum tuberosum HOM05D007524 ORTHO05D009475 7.6e-29 132.1 151 46.4
CBR_g6685 Chara braunii HOM05D007524 ORTHO05D009475 7.8e-18 95.5 157 36.3
MCO09G042 Micromonas commoda HOM05D007524 ORTHO05D009475 2.1e-15 87.4 369 24.9
PGSC0003DMG401010496 Solanum tuberosum HOM05D007524 ORTHO05D009475 6.4e-12 75.9 51 68.6
Ah.06g191680 Amaranthus hybridus HOM05D007524 ORTHO05D009475 7.1e-11 72.4 59 64.4
Hma1.2p1_0846F.1_g227720 Hydrangea macrophylla HOM05D007197 ORTHO05D009064 9.0e-06 55.5 155 32.3


User provided reference genes

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