Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 2.5e-181 638.6 326 100.0
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 9.1e-38 161.8 101 81.2
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 2.9e-36 156.8 102 79.4
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 1.8e-33 147.5 103 74.8
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 2.3e-33 147.1 101 75.2
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 2.3e-33 147.1 106 69.8
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 3.0e-33 146.7 101 75.2
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 4.4e-32 142.9 101 71.3
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 4.4e-32 142.9 101 71.3
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 4.4e-32 142.9 101 71.3
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 4.4e-32 142.9 101 71.3
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 7.4e-32 142.1 100 71.0
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 7.4e-32 142.1 101 72.3
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 9.7e-32 141.7 104 68.3
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 1.3e-31 141.4 102 71.6
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 1.7e-31 141.0 103 71.8
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 2.2e-31 140.6 102 71.6
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 2.2e-31 140.6 102 71.6
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 2.8e-31 140.2 101 71.3
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 3.7e-31 139.8 101 73.3
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 3.7e-31 139.8 102 71.6
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 4.8e-31 139.4 101 71.3
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 4.8e-31 139.4 101 68.3
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 6.3e-31 139.0 101 70.3
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 1.8e-30 137.5 99 69.7
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 1.8e-30 137.5 101 68.3
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 3.1e-30 136.7 101 69.3
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 3.1e-30 136.7 101 69.3
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 7.0e-30 135.6 101 68.3
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 9.1e-30 135.2 101 70.3
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 9.1e-30 135.2 103 67.0
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 9.1e-30 135.2 94 73.4
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 2.6e-29 133.7 101 69.3
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 3.4e-29 133.3 101 68.3
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 3.4e-29 133.3 103 68.0
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 3.4e-29 133.3 122 58.2
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 5.9e-29 132.5 101 69.3
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 5.9e-29 132.5 101 68.3
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 1.0e-28 131.7 103 67.0
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 1.3e-28 131.3 100 66.0
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 1.3e-28 131.3 102 64.7
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 1.3e-28 131.3 101 67.3
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 1.7e-28 131.0 100 64.0
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 1.7e-28 131.0 103 69.9
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 1.7e-28 131.0 103 66.0
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 2.2e-28 130.6 102 67.6
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 2.2e-28 130.6 98 66.3
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 2.9e-28 130.2 98 66.3
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 3.8e-28 129.8 101 63.4
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 3.8e-28 129.8 103 65.0
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 5.0e-28 129.4 98 65.3
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 6.5e-28 129.0 104 65.4
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 8.5e-28 128.6 104 65.4
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 8.5e-28 128.6 101 68.3
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 1.4e-27 127.9 100 68.0
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 1.4e-27 127.9 100 68.0
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 1.4e-27 127.9 104 65.4
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 4.2e-27 126.3 99 67.7
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 4.2e-27 126.3 103 66.0
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 4.2e-27 126.3 103 66.0
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 7.2e-27 125.6 100 67.0
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 7.2e-27 125.6 99 64.6
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 1.6e-26 124.4 105 64.8
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 2.1e-26 124.0 102 66.7
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 2.1e-26 124.0 101 65.3
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 6.1e-26 122.5 101 63.4
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 8.0e-26 122.1 92 68.5
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.0e-25 121.7 97 70.1
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 1.8e-25 120.9 94 62.8
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 2.3e-25 120.6 104 62.5
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 2.3e-25 120.6 104 62.5
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 2.3e-25 120.6 97 67.0
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 5.2e-25 119.4 105 63.8
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 1.1e-24 118.2 104 61.5
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 1.1e-24 118.2 103 62.1
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 2.6e-24 117.1 92 67.4
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 4.4e-24 116.3 97 64.9
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 9.7e-24 115.2 94 60.6
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 2.2e-23 114.0 103 63.1
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 6.3e-23 112.5 94 59.6
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 6.3e-23 112.5 101 60.4
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 7.0e-22 109.0 103 61.2
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 7.0e-22 109.0 103 61.2
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 7.0e-22 109.0 103 61.2
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 7.0e-22 109.0 99 58.6
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 1.2e-21 108.2 106 58.5
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 1.6e-21 107.8 101 58.4
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 1.0e-20 105.1 97 62.9
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 1.3e-20 104.8 103 59.2
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 2.9e-20 103.6 83 61.4
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 1.9e-19 100.9 111 54.1
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 2.5e-19 100.5 101 57.4
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 1.7e-15 87.8 87 57.5
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 4.1e-14 83.2 90 53.3
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 5.3e-14 82.8 82 58.5
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 1.3e-12 78.2 75 54.7
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 5.0e-12 76.3 63 63.5
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 5.0e-12 76.3 105 50.5
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 4.7e-10 69.7 94 44.7
Aqoxy3G02174 Aquilegia oxysepala HOM05D000212 ORTHO05D000225 1.4e-09 68.2 157 33.1
Aqoxy7G02360 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.2e-07 60.8 61 52.5
Hund16811 Selenicereus undatus HOM05D007473 ORTHO05D009459 2.8e-07 60.5 59 55.9
Aqoxy7G02997 Aquilegia oxysepala HOM05D008675 ORTHO05D000022 3.1e-06 57.0 157 33.8
Mapoly0047s0010 Marchantia polymorpha HOM05D026638 ORTHO05D030127 7.0e-06 55.8 112 36.6


User provided reference genes

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