Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02471 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 1.4e-57 226.1 119 100.0
Aqoxy5G02966 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 1.6e-56 222.6 117 99.1
Aqoxy5G02658 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 6.6e-55 217.2 116 98.3
Aqoxy6G01748 Aquilegia oxysepala HOM05D004220 ORTHO05D006217 6.6e-55 217.2 118 96.6
Aqoxy2G01924 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 7.4e-38 160.6 83 100.0
Aqoxy7G02277 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 7.4e-38 160.6 83 100.0
Nn4g24652 Nelumbo nucifera HOM05D004220 ORTHO05D006217 3.7e-37 158.3 112 74.1
Aqoxy6G01744 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 2.4e-36 155.6 83 96.4
Aqoxy3G02388 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 4.5e-35 151.4 82 96.3
TAR371G0933 Trochodendron aralioides HOM05D004220 ORTHO05D006217 4.5e-35 151.4 116 68.1
Rhsim09G0088900 Rhododendron simsii HOM05D004220 ORTHO05D006217 8.4e-34 147.1 116 68.1
Dinv18907 Davidia involucrata HOM05D004220 ORTHO05D006217 1.9e-33 146.0 121 66.9
PSO302G0185 Papaver somniferum HOM05D004220 ORTHO05D006217 5.5e-33 144.4 112 69.6
PSO541G1847 Papaver somniferum HOM05D004220 ORTHO05D006217 5.5e-33 144.4 112 69.6
Dinv26357 Davidia involucrata HOM05D004220 ORTHO05D006217 9.3e-33 143.7 93 78.5
Lalb_Chr16g0387441 Lupinus albus HOM05D004220 ORTHO05D006217 9.3e-33 143.7 86 82.6
TAR629G1713 Trochodendron aralioides HOM05D004220 ORTHO05D006217 9.3e-33 143.7 112 67.0
Ciclev10015633m.g Citrus clementina HOM05D004220 ORTHO05D006217 2.7e-32 142.1 117 66.7
Potri.010G105300 Populus trichocarpa HOM05D004220 ORTHO05D006217 4.6e-32 141.4 116 64.7
SGA_v2.0_scaffold143G35733 Striga asiatica HOM05D004220 ORTHO05D006217 4.6e-32 141.4 114 64.9
Lsat_1_v5_gn_8_35340 Lactuca sativa HOM05D004220 ORTHO05D006217 6.0e-32 141.0 91 79.1
TAR622G1230 Trochodendron aralioides HOM05D004220 ORTHO05D006217 6.0e-32 141.0 83 83.1
Ah.05g168430 Amaranthus hybridus HOM05D004220 ORTHO05D006217 7.9e-32 140.6 113 65.5
Manes.15G135500 Manihot esculenta HOM05D004220 ORTHO05D006217 7.9e-32 140.6 116 66.4
Oeu044002.1 Olea europaea HOM05D004220 ORTHO05D006217 7.9e-32 140.6 118 63.6
Medtr8g105860 Medicago truncatula HOM05D004220 ORTHO05D006217 1.0e-31 140.2 85 81.2
TAR629G0578 Trochodendron aralioides HOM05D004220 ORTHO05D006217 1.0e-31 140.2 112 65.2
Actinidia12400 Actinidia chinensis HOM05D004220 ORTHO05D006217 1.8e-31 139.4 90 76.7
Lj4g0025833 Lotus japonicus HOM05D004220 ORTHO05D006217 1.8e-31 139.4 85 80.0
LjContig00081g0015221 Lotus japonicus HOM05D004220 ORTHO05D006217 1.8e-31 139.4 85 80.0
Potri.008G135700 Populus trichocarpa HOM05D004220 ORTHO05D006217 2.3e-31 139.0 104 68.3
Aa31LG1G290 Aethionema arabicum HOM05D004220 ORTHO05D006217 3.0e-31 138.7 104 69.2
Lalb_Chr05g0222081 Lupinus albus HOM05D004220 ORTHO05D006217 3.0e-31 138.7 106 66.0
SalBow2G3345 Salvia bowleyana HOM05D004220 ORTHO05D006217 3.0e-31 138.7 115 63.5
THA.LOC104805088 Tarenaya hassleriana HOM05D004220 ORTHO05D006217 3.0e-31 138.7 116 66.4
Ca_17252_v3 Cicer arietinum L. HOM05D004220 ORTHO05D006217 3.9e-31 138.3 110 68.2
HanXRQChr06g0171081 Helianthus annuus HOM05D004220 ORTHO05D006217 6.7e-31 137.5 118 66.1
HanXRQChr12g0364941 Helianthus annuus HOM05D004220 ORTHO05D006217 6.7e-31 137.5 118 66.1
Lalb_Chr09g0330781 Lupinus albus HOM05D004220 ORTHO05D006217 6.7e-31 137.5 103 69.9
Sabra08G0103700 Salix brachista HOM05D004220 ORTHO05D006217 6.7e-31 137.5 85 78.8
A06p10860 Brassica napus HOM05D004220 ORTHO05D006217 8.7e-31 137.1 116 63.8
BraA06t24264Z Brassica rapa HOM05D004220 ORTHO05D006217 8.7e-31 137.1 116 63.8
Eucgr.B03437 Eucalyptus grandis HOM05D004220 ORTHO05D006217 8.7e-31 137.1 85 77.6
Lj6A736T83 Lonicera japonica HOM05D004220 ORTHO05D006217 8.7e-31 137.1 106 67.9
Glyma.08G047800 Glycine max HOM05D004220 ORTHO05D006217 1.1e-30 136.7 89 75.3
Psat4g004640 Pisum sativum HOM05D004220 ORTHO05D006217 1.1e-30 136.7 85 77.6
BcaB03g13081 Brassica carinata HOM05D004220 ORTHO05D006217 1.5e-30 136.3 116 62.9
DCAR_002675 Daucus carota HOM05D004220 ORTHO05D006217 1.5e-30 136.3 89 77.5
BcaC05g25401 Brassica carinata HOM05D004220 ORTHO05D006217 1.9e-30 136.0 116 62.9
BolC5t30019H Brassica oleracea HOM05D004220 ORTHO05D006217 1.9e-30 136.0 116 62.9
PGSC0003DMG400022796 Solanum tuberosum HOM05D004220 ORTHO05D006217 1.9e-30 136.0 96 68.8
Peaxi162Scf00275g00215 Petunia axillaris HOM05D004220 ORTHO05D006217 2.5e-30 135.6 91 72.5
BcaC07g38762 Brassica carinata HOM05D004220 ORTHO05D006217 3.3e-30 135.2 116 62.9
DCAR_022139 Daucus carota HOM05D004220 ORTHO05D006217 3.3e-30 135.2 89 76.4
ECA233G3753 Erigeron canadensis HOM05D004220 ORTHO05D006217 3.3e-30 135.2 115 65.2
C05p12790 Brassica napus HOM05D004220 ORTHO05D006217 4.3e-30 134.8 116 62.1
C08p16920 Brassica napus HOM05D004220 ORTHO05D006217 4.3e-30 134.8 116 62.9
BolC8t49319H Brassica oleracea HOM05D004220 ORTHO05D006217 4.3e-30 134.8 116 62.9
Cpa.g.sc2.184 Carica papaya HOM05D004220 ORTHO05D006217 4.3e-30 134.8 119 63.9
BcaB02g06550 Brassica carinata HOM05D004220 ORTHO05D006217 5.7e-30 134.4 116 62.1
Phvul.002G323900 Phaseolus vulgaris HOM05D004220 ORTHO05D006217 5.7e-30 134.4 98 69.4
Solyc01g005250.4 Solanum lycopersicum HOM05D004220 ORTHO05D006217 5.7e-30 134.4 93 68.8
Sopen01g001280 Solanum pennellii HOM05D004220 ORTHO05D006217 5.7e-30 134.4 93 68.8
AL1G26830 Arabidopsis lyrata HOM05D004220 ORTHO05D006217 7.4e-30 134.0 116 62.9
CDE07G1395 Ceratophyllum demersum HOM05D004220 ORTHO05D006217 7.4e-30 134.0 115 63.5
CBR_g30041 Chara braunii HOM05D004220 ORTHO05D006217 7.4e-30 134.0 95 73.7
Thhalv10007952m.g Eutrema salsugineum HOM05D004220 ORTHO05D006217 7.4e-30 134.0 116 62.1
MBI05_g37451_MAGBIO Magnolia biondii HOM05D004220 ORTHO05D006217 7.4e-30 134.0 117 65.0
EL10Ac9g22864 Beta vulgaris HOM05D004220 ORTHO05D006217 9.6e-30 133.7 118 61.9
Carub.0001s1460 Capsella rubella HOM05D004220 ORTHO05D006217 9.6e-30 133.7 116 62.1
Glyma.05G240700 Glycine max HOM05D004220 ORTHO05D006217 9.6e-30 133.7 110 63.6
Potri.010G105000 Populus trichocarpa HOM05D004220 ORTHO05D006217 9.6e-30 133.7 83 78.3
Sp1g13250 Schrenkiella parvula HOM05D004220 ORTHO05D006217 9.6e-30 133.7 116 62.1
Hund08335 Selenicereus undatus HOM05D004220 ORTHO05D006217 9.6e-30 133.7 91 71.4
Sc17g0004200 Simmondsia chinensis HOM05D004220 ORTHO05D006217 1.3e-29 133.3 117 59.8
VMungo0251G0500 Vigna mungo HOM05D004220 ORTHO05D006217 1.3e-29 133.3 85 76.5
AUR62015160 Chenopodium quinoa HOM05D004220 ORTHO05D006217 1.6e-29 132.9 83 77.1
SGA_v2.0_scaffold23G10178 Striga asiatica HOM05D004220 ORTHO05D006217 1.6e-29 132.9 100 64.0
A08p31810 Brassica napus HOM05D004220 ORTHO05D006217 2.1e-29 132.5 116 61.2
BraA08t35103Z Brassica rapa HOM05D004220 ORTHO05D006217 2.1e-29 132.5 111 65.8
CARHR015340 Cardamine hirsuta HOM05D004220 ORTHO05D006217 2.1e-29 132.5 116 61.2
ATR0763G027 Amborella trichopoda HOM05D004220 ORTHO05D006217 2.8e-29 132.1 85 77.6
AUR62017612 Chenopodium quinoa HOM05D004220 ORTHO05D006217 2.8e-29 132.1 83 74.7
arahy.Tifrunner.gnm1.ann1.GF1W8W Arachis hypogaea HOM05D004220 ORTHO05D006217 3.7e-29 131.7 85 77.6
MSTRG.13631 Avicennia marina HOM05D004220 ORTHO05D006217 3.7e-29 131.7 98 68.4
AT1G14810 Arabidopsis thaliana HOM05D004220 ORTHO05D006217 4.8e-29 131.3 116 62.1
Migut.E00492 Erythranthe guttata HOM05D004220 ORTHO05D006217 4.8e-29 131.3 118 61.9
SEGI_30189 Sequoiadendron giganteum HOM05D004220 ORTHO05D006217 4.8e-29 131.3 86 72.1
THA.LOC104824123 Tarenaya hassleriana HOM05D004220 ORTHO05D006217 4.8e-29 131.3 114 63.2
Pp3c5_10760 Physcomitrium patens HOM05D004220 ORTHO05D006217 6.2e-29 131.0 103 66.0
TWI74G0333 Tripterygium wilfordii HOM05D004220 ORTHO05D006217 6.2e-29 131.0 116 63.8
MELO3C010427.2 Cucumis melo HOM05D004220 ORTHO05D006217 8.2e-29 130.6 104 65.4
FvH4_4g33450 Fragaria vesca HOM05D004220 ORTHO05D006217 8.2e-29 130.6 97 67.0
FAN12G0660 Fragaria x ananassa HOM05D004220 ORTHO05D006217 8.2e-29 130.6 97 67.0
QL03p036195 Quercus lobata HOM05D004220 ORTHO05D006217 8.2e-29 130.6 106 64.2
unitig_29.g31883 Utricularia gibba HOM05D004220 ORTHO05D006217 8.2e-29 130.6 99 63.6
RcHm_v2.0_Chr4g0442761 Rosa chinensis HOM05D004220 ORTHO05D006217 1.4e-28 129.8 97 68.0
MD13G1019500 Malus domestica HOM05D004220 ORTHO05D006217 1.8e-28 129.4 94 71.3
CAN.G282.120 Capsicum annuum HOM05D004220 ORTHO05D006217 2.4e-28 129.0 83 73.5
CiPaw.06G053400 Carya illinoinensis HOM05D004220 ORTHO05D006217 2.4e-28 129.0 85 75.3
FAN07G0058 Fragaria x ananassa HOM05D004220 ORTHO05D006217 2.4e-28 129.0 97 66.0
FAN07G1238 Fragaria x ananassa HOM05D004220 ORTHO05D006217 2.4e-28 129.0 97 66.0
CANSAT78G0088 Cannabis sativa HOM05D004220 ORTHO05D006217 3.1e-28 128.6 113 62.8
CsaV3_5G014440 Cucumis sativus L. HOM05D004220 ORTHO05D006217 4.1e-28 128.3 102 65.7
unitig_27.g25162 Utricularia gibba HOM05D004220 ORTHO05D006217 4.1e-28 128.3 90 67.8
PGR102G3065 Punica granatum HOM05D004220 ORTHO05D006217 5.3e-28 127.9 114 58.8
Atru.chr11.900 Acer truncatum HOM05D004220 ORTHO05D006217 9.0e-28 127.1 119 63.9
CDE12G0826 Ceratophyllum demersum HOM05D004220 ORTHO05D017372 9.0e-28 127.1 83 73.5
Cfa015032 Carpinus fangiana HOM05D004220 ORTHO05D006217 1.2e-27 126.7 116 59.5
ClCG07G005480 Citrullus lanatus HOM05D004220 ORTHO05D006217 1.5e-27 126.3 102 63.7
MSTRG.2121 Avicennia marina HOM05D004220 ORTHO05D017372 2.0e-27 125.9 98 64.3
FAN17G0395 Fragaria x ananassa HOM05D004220 ORTHO05D006217 2.0e-27 125.9 118 55.9
Nitab4.5_0000640g0100 Nicotiana tabacum HOM05D004220 ORTHO05D006217 2.0e-27 125.9 83 71.1
HPP92_001024 Vanilla planifolia HOM05D004220 ORTHO05D006217 2.0e-27 125.9 92 66.3
FAN22G0209 Fragaria x ananassa HOM05D004220 ORTHO05D006217 2.6e-27 125.6 97 64.9
MD16G1017700 Malus domestica HOM05D004220 ORTHO05D006217 2.6e-27 125.6 106 65.1
Sed0023691 Sechium edule HOM05D004220 ORTHO05D006217 2.6e-27 125.6 102 64.7
SMO119G0035 Selaginella moellendorffii HOM05D004220 ORTHO05D006217 2.6e-27 125.6 83 71.1
Haze_10865 Corylus avellana HOM05D004220 ORTHO05D006217 3.4e-27 125.2 116 57.8
Prupe.1G334400 Prunus persica HOM05D004220 ORTHO05D006217 2.2e-26 122.5 121 59.5
AagrBONN_evm.TU.Sc2ySwM_368.1674 Anthoceros agrestis HOM05D004220 ORTHO05D006217 2.9e-26 122.1 85 68.2
COL.COLO4_27642 Corchorus olitorius HOM05D004220 ORTHO05D006217 2.9e-26 122.1 85 69.4
Duzib251G0717 Durio zibethinus HOM05D004220 ORTHO05D006217 2.9e-26 122.1 85 69.4
Gohir.D13G025700 Gossypium hirsutum HOM05D004220 ORTHO05D006217 5.0e-26 121.3 85 68.2
Gorai.013G028900 Gossypium raimondii HOM05D004220 ORTHO05D006217 5.0e-26 121.3 85 68.2
Zm00001eb214360 Zea mays HOM05D004220 ORTHO05D006217 6.5e-26 120.9 110 53.6
Gohir.A12G154900 Gossypium hirsutum HOM05D004220 ORTHO05D006217 8.4e-26 120.6 109 60.6
Sed0000427 Sechium edule HOM05D004220 ORTHO05D006217 8.4e-26 120.6 102 62.7
Thecc.02G309700 Theobroma cacao HOM05D004220 ORTHO05D006217 1.1e-25 120.2 98 64.3
Duzib248G1338 Durio zibethinus HOM05D004220 ORTHO05D006217 1.9e-25 119.4 90 65.6
Gohir.D12G158100 Gossypium hirsutum HOM05D004220 ORTHO05D006217 2.5e-25 119.0 109 59.6
Gorai.008G170900 Gossypium raimondii HOM05D004220 ORTHO05D006217 2.5e-25 119.0 109 59.6
Gohir.A13G026900 Gossypium hirsutum HOM05D004220 ORTHO05D006217 3.2e-25 118.6 85 67.1
Mapoly0086s0044 Marchantia polymorpha HOM05D004220 ORTHO05D006217 7.2e-25 117.5 96 62.5
Actinidia36618 Actinidia chinensis HOM05D004220 ORTHO05D006217 6.1e-24 114.4 97 62.9
Os03g0760700 Oryza sativa ssp. japonica HOM05D004220 ORTHO05D006217 1.8e-23 112.8 94 58.5
Cre09.g389689 Chlamydomonas reinhardtii HOM05D004220 ORTHO05D006217 3.3e-22 108.6 107 55.1
MCO01G646 Micromonas commoda HOM05D004220 ORTHO05D006217 3.3e-22 108.6 86 60.5
TPR.G19271 Trifolium pratense HOM05D004220 ORTHO05D006217 1.1e-17 93.6 60 78.3
BcaB08g34410 Brassica carinata HOM05D001471 ORTHO05D001325 4.5e-11 71.6 68 60.3
PRCOL_00000291 Prasinoderma coloniale HOM05D004220 ORTHO05D006217 6.1e-08 61.2 45 64.4
Nitab4.5_0000198g0090 Nicotiana tabacum HOM05D004220 ORTHO05D006217 7.4e-06 54.3 32 71.9


User provided reference genes

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