Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 5.5e-72 274.2 142 100.0
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 7.7e-26 120.9 135 54.8
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 3.8e-25 118.6 151 52.3
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 5.0e-25 118.2 135 54.8
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 6.5e-25 117.9 135 54.1
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 2.4e-19 99.4 139 48.2
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 4.1e-19 98.6 154 48.7
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 4.5e-18 95.1 147 44.2
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 7.7e-18 94.4 140 45.0
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 7.7e-18 94.4 124 49.2
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.3e-17 93.6 154 46.8
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 2.9e-17 92.4 154 46.1
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 5.0e-17 91.7 155 42.6
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 5.0e-17 91.7 157 41.4
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 6.5e-17 91.3 155 43.2
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 6.5e-17 91.3 139 46.0
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 6.5e-17 91.3 142 45.1
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 8.6e-17 90.9 150 42.0
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.1e-16 90.5 154 42.9
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 1.1e-16 90.5 142 45.1
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.5e-16 90.1 163 45.4
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.5e-16 90.1 163 45.4
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 1.9e-16 89.7 134 46.3
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.9e-16 89.7 167 38.9
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.9e-16 89.7 167 38.9
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 2.5e-16 89.4 150 43.3
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 2.5e-16 89.4 144 43.8
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 2.5e-16 89.4 142 45.8
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 4.2e-16 88.6 155 41.9
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 4.2e-16 88.6 150 42.7
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 4.2e-16 88.6 153 41.8
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 5.5e-16 88.2 138 41.3
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 5.5e-16 88.2 160 43.1
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 7.2e-16 87.8 147 43.5
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 7.2e-16 87.8 147 42.2
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 1.2e-15 87.0 137 41.6
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.2e-15 87.0 153 40.5
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 1.6e-15 86.7 147 43.5
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.1e-15 86.3 136 44.1
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.1e-15 86.3 142 44.4
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 2.1e-15 86.3 147 45.6
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 2.8e-15 85.9 153 40.5
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 3.6e-15 85.5 153 39.9
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 4.7e-15 85.1 149 43.6
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 6.1e-15 84.7 153 42.5
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 6.1e-15 84.7 145 42.8
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 8.0e-15 84.3 136 46.3
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 1.4e-14 83.6 150 42.0
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 3.0e-14 82.4 138 44.9
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 6.8e-14 81.3 148 39.9
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 8.9e-14 80.9 141 41.8
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 8.9e-14 80.9 158 38.6
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.2e-13 80.5 125 46.4
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 1.2e-13 80.5 140 44.3
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 1.2e-13 80.5 153 41.2
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 1.2e-13 80.5 143 42.7
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 1.5e-13 80.1 133 38.3
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 2.0e-13 79.7 148 41.9
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 2.0e-13 79.7 145 38.6
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 2.6e-13 79.3 154 41.6
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 4.4e-13 78.6 150 40.0
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 4.4e-13 78.6 153 36.6
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 5.7e-13 78.2 146 42.5
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 7.5e-13 77.8 132 43.9
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 7.5e-13 77.8 170 38.8
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 1.3e-12 77.0 135 43.7
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 1.3e-12 77.0 135 43.7
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 1.7e-12 76.6 132 44.7
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 2.2e-12 76.3 157 36.9
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 2.2e-12 76.3 155 37.4
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 2.8e-12 75.9 153 40.5
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 2.8e-12 75.9 129 40.3
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 2.8e-12 75.9 163 38.7
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 4.9e-12 75.1 145 40.7
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 4.9e-12 75.1 135 41.5
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 4.9e-12 75.1 160 40.6
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 6.3e-12 74.7 135 43.7
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 6.3e-12 74.7 135 43.7
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 6.3e-12 74.7 128 43.8
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 6.3e-12 74.7 153 38.6
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 6.3e-12 74.7 145 42.1
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 6.3e-12 74.7 131 42.0
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 6.3e-12 74.7 133 41.4
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 8.3e-12 74.3 134 42.5
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 1.1e-11 73.9 135 41.5
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 1.4e-11 73.6 102 48.0
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 1.8e-11 73.2 137 42.3
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 2.4e-11 72.8 135 41.5
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 2.4e-11 72.8 135 42.2
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 3.1e-11 72.4 135 41.5
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 3.1e-11 72.4 135 41.5
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 4.1e-11 72.0 127 44.1
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 5.4e-11 71.6 138 39.9
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 1.2e-10 70.5 150 35.3
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 1.6e-10 70.1 131 42.0
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 2.0e-10 69.7 131 42.0
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 2.7e-10 69.3 171 35.1
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 2.7e-10 69.3 145 40.7
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 2.7e-10 69.3 139 38.1
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 3.5e-10 68.9 169 37.3
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 5.9e-10 68.2 129 39.5
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 5.9e-10 68.2 155 34.8
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 5.9e-10 68.2 89 49.4
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 5.0e-09 65.1 90 48.9
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 6.6e-09 64.7 171 33.9
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 6.6e-09 64.7 140 37.9
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 6.6e-09 64.7 145 39.3
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 8.6e-09 64.3 135 40.7
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 1.1e-08 63.9 130 41.5
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 4.3e-08 62.0 158 34.2
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 4.3e-08 62.0 124 42.7
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 1.2e-07 60.5 126 38.9
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 2.1e-07 59.7 126 39.7
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 3.6e-07 58.9 139 39.6
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 8.0e-07 57.8 161 35.4
AUR62017858 Chenopodium quinoa HOM05D006473 ORTHO05D008108 1.0e-06 57.4 87 42.5
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 1.8e-06 56.6 129 32.6
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 2.3e-06 56.2 124 37.1


User provided reference genes

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