Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 1.8e-153 545.8 269 100.0
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 4.5e-83 312.0 254 61.0
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 1.0e-82 310.8 252 61.1
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 3.6e-72 275.8 251 58.2
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 3.9e-71 272.3 274 52.2
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 3.9e-71 272.3 267 52.4
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 6.7e-71 271.6 272 51.8
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 1.9e-70 270.0 256 52.3
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 9.7e-70 267.7 265 50.6
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 2.4e-68 263.1 262 53.4
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 4.1e-68 262.3 261 52.5
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 1.2e-67 260.8 267 49.4
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 3.4e-67 259.2 277 49.8
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 1.4e-65 253.8 245 53.5
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 1.4e-65 253.8 270 51.9
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 4.2e-65 252.3 285 48.8
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 5.5e-65 251.9 274 48.2
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 7.2e-65 251.5 245 53.1
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 1.6e-64 250.4 253 49.4
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 2.1e-64 250.0 283 49.1
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 1.0e-63 247.7 255 48.2
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 2.3e-63 246.5 262 49.2
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 2.3e-63 246.5 270 47.8
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 2.0e-62 243.4 253 50.2
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 7.4e-62 241.5 249 52.2
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 2.2e-61 240.0 255 47.8
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 6.3e-61 238.4 255 51.4
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 1.8e-60 236.9 253 49.4
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 2.4e-60 236.5 265 48.3
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 6.9e-60 235.0 253 48.2
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 9.1e-60 234.6 259 47.5
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 1.5e-59 233.8 261 47.5
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 7.7e-59 231.5 276 44.9
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 1.3e-58 230.7 257 51.0
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 1.3e-58 230.7 252 48.0
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 2.2e-58 229.9 272 46.3
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 2.9e-58 229.6 276 44.6
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 5.0e-58 228.8 271 45.8
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 6.5e-58 228.4 273 46.2
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 3.2e-57 226.1 265 45.7
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 3.2e-57 226.1 261 46.7
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 7.2e-57 224.9 266 47.0
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 1.0e-55 221.1 254 46.5
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 2.3e-55 219.9 253 44.7
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 2.3e-55 219.9 271 45.8
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 3.0e-55 219.5 210 56.7
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 8.8e-55 218.0 272 43.8
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 5.7e-54 215.3 253 45.8
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 7.4e-54 214.9 249 46.2
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 1.7e-53 213.8 249 46.2
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 6.3e-53 211.8 237 50.6
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 1.2e-51 207.6 252 44.8
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 3.5e-51 206.1 214 51.9
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 2.9e-50 203.0 273 42.5
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 1.5e-49 200.7 161 59.0
ATR0684G011 Amborella trichopoda HOM05D003443 ORTHO05D009887 1.0e-47 194.5 261 40.2
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 4.8e-45 185.7 155 60.6
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 9.1e-44 181.4 204 47.1
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 1.6e-43 180.6 180 52.8
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 1.0e-42 177.9 199 46.7
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 2.9e-42 176.4 214 45.3
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 1.1e-41 174.5 275 37.8
Cc10_g11020 Coffea canephora HOM05D003443 ORTHO05D009887 2.5e-41 173.3 160 55.6
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 4.4e-38 162.5 278 36.3
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 2.2e-37 160.2 217 35.5
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 6.5e-34 148.7 290 34.5
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 1.8e-31 140.6 219 33.8
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 6.8e-31 138.7 252 36.9
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 6.3e-29 132.1 254 33.9
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 1.7e-26 124.0 181 41.4
Lj7E334T0 Lonicera japonica HOM05D003443 ORTHO05D009887 6.1e-24 115.5 92 60.9
PGSC0003DMG400021471 Solanum tuberosum HOM05D003443 ORTHO05D009887 7.0e-20 102.1 85 60.0
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.0e-18 98.2 71 67.6
COL.COLO4_12190 Corchorus olitorius HOM05D003443 ORTHO05D009887 4.7e-16 89.4 78 51.3
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 3.7e-13 79.7 88 44.3
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 1.9e-12 77.4 123 36.6
Zm00001eb081310 Zea mays HOM05D003443 ORTHO05D009887 2.1e-08 63.9 130 33.8
Hma1.2p1_0248F.1_g102080 Hydrangea macrophylla HOM05D003443 ORTHO05D009887 2.0e-06 57.4 35 74.3


User provided reference genes

Program Settings