Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02385 Aquilegia oxysepala HOM05D024176 ORTHO05D005846 8.6e-84 313.5 150 100.0
Aqoxy3G01422 Aquilegia oxysepala HOM05D024176 ORTHO05D005846 8.6e-60 233.8 129 86.0
Aqoxy5G02746 Aquilegia oxysepala HOM05D024176 ORTHO05D005846 9.0e-49 197.2 107 87.9
Aqoxy3G01416 Aquilegia oxysepala HOM05D024176 ORTHO05D077361 5.6e-35 151.4 76 92.1
Aqoxy7G02219 Aquilegia oxysepala HOM05D024176 ORTHO05D078207 2.6e-32 142.5 150 58.0
Haze_03590 Corylus avellana HOM05D000462 ORTHO05D005846 1.0e-12 77.4 145 32.4
Aqoxy3G02219 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 1.8e-12 76.6 140 35.7
MD07G1080300 Malus domestica HOM05D000462 ORTHO05D005846 6.7e-12 74.7 120 40.0
MD02G1233300 Malus domestica HOM05D000462 ORTHO05D005846 8.8e-12 74.3 120 38.3
MELO3C006216.2 Cucumis melo HOM05D000462 ORTHO05D005846 1.5e-11 73.6 120 36.7
RcHm_v2.0_Chr2g0147401 Rosa chinensis HOM05D000462 ORTHO05D005846 1.9e-11 73.2 119 38.7
Cfa010675 Carpinus fangiana HOM05D000462 ORTHO05D005846 2.5e-11 72.8 135 32.6
GSVIVG01019293001 Vitis vinifera HOM05D000462 ORTHO05D005846 2.5e-11 72.8 112 38.4
Aqoxy7G00268 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 3.3e-11 72.4 138 35.5
CsaV3_3G009950 Cucumis sativus L. HOM05D000462 ORTHO05D005846 4.3e-11 72.0 120 36.7
Sed0009318 Sechium edule HOM05D000462 ORTHO05D005846 4.3e-11 72.0 120 38.3
Aqoxy2G03796 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 5.7e-11 71.6 122 39.3
FvH4_6g35582 Fragaria vesca HOM05D000462 ORTHO05D005846 7.4e-11 71.2 148 35.8
FAN14G2914 Fragaria x ananassa HOM05D000462 ORTHO05D005846 7.4e-11 71.2 148 35.8
Dinv43525 Davidia involucrata HOM05D000462 ORTHO05D005846 1.3e-10 70.5 120 36.7
Solyc01g150140.1 Solanum lycopersicum HOM05D000462 ORTHO05D005846 1.7e-10 70.1 122 36.9
ClCG05G002510 Citrullus lanatus HOM05D000462 ORTHO05D005846 2.8e-10 69.3 120 34.2
Nn3g19412 Nelumbo nucifera HOM05D000462 ORTHO05D005846 2.8e-10 69.3 120 37.5
Nn3g19417 Nelumbo nucifera HOM05D000462 ORTHO05D005846 2.8e-10 69.3 120 37.5
PGSC0003DMG400042622 Solanum tuberosum HOM05D000462 ORTHO05D005846 2.8e-10 69.3 118 38.1
TAR374G1078 Trochodendron aralioides HOM05D000462 ORTHO05D005846 4.8e-10 68.6 120 40.0
Hma1.2p1_0353F.1_g133250 Hydrangea macrophylla HOM05D000462 ORTHO05D005846 6.3e-10 68.2 120 36.7
FvH4_6g35581 Fragaria vesca HOM05D000462 ORTHO05D005846 8.2e-10 67.8 118 35.6
RcHm_v2.0_Chr2g0147411 Rosa chinensis HOM05D000462 ORTHO05D005846 8.2e-10 67.8 150 36.7
ClCG05G011530 Citrullus lanatus HOM05D000462 ORTHO05D005846 1.8e-09 66.6 119 34.5
Eucgr.E01753 Eucalyptus grandis HOM05D000462 ORTHO05D005846 3.1e-09 65.9 139 33.8
FAN06G2574 Fragaria x ananassa HOM05D000462 ORTHO05D005846 3.1e-09 65.9 123 38.2
Nn1g09754 Nelumbo nucifera HOM05D000462 ORTHO05D005846 3.1e-09 65.9 120 38.3
Sopen01g026530 Solanum pennellii HOM05D000462 ORTHO05D005846 3.1e-09 65.9 119 33.6
FvH4_7g07720 Fragaria vesca HOM05D000462 ORTHO05D005846 4.1e-09 65.5 150 36.0
FAN03G2319 Fragaria x ananassa HOM05D000462 ORTHO05D005846 5.3e-09 65.1 119 35.3
PSO017G2480 Papaver somniferum HOM05D000462 ORTHO05D005846 6.9e-09 64.7 111 38.7
Zm00001eb421100 Zea mays HOM05D000462 ORTHO05D005846 9.1e-09 64.3 123 34.1
CAN.G206.135 Capsicum annuum HOM05D000462 ORTHO05D005846 1.5e-08 63.5 144 31.2
Aqoxy3G00515 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 2.0e-08 63.2 135 34.1
FAN10G1386 Fragaria x ananassa HOM05D000462 ORTHO05D005846 2.0e-08 63.2 146 34.2
Solyc01g081400.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 2.6e-08 62.8 120 36.7
Sopen01g032970 Solanum pennellii HOM05D000462 ORTHO05D005846 2.6e-08 62.8 120 36.7
Actinidia21593 Actinidia chinensis HOM05D000462 ORTHO05D005846 4.5e-08 62.0 119 32.8
MSTRG.17069 Avicennia marina HOM05D000462 ORTHO05D005846 4.5e-08 62.0 122 33.6
DCAR_029566 Daucus carota HOM05D000462 ORTHO05D005846 5.9e-08 61.6 119 32.8
PSO478G1321 Papaver somniferum HOM05D000462 ORTHO05D005846 5.9e-08 61.6 111 37.8
PGSC0003DMG400001798 Solanum tuberosum HOM05D000462 ORTHO05D005846 7.7e-08 61.2 120 35.0
PGSC0003DMG400020979 Solanum tuberosum HOM05D000462 ORTHO05D005846 7.7e-08 61.2 120 35.0
Hund26858 Selenicereus undatus HOM05D000462 ORTHO05D005846 1.3e-07 60.5 122 34.4
RcHm_v2.0_Chr1g0342401 Rosa chinensis HOM05D000462 ORTHO05D005846 1.7e-07 60.1 118 32.2
RcHm_v2.0_Chr1g0342491 Rosa chinensis HOM05D000462 ORTHO05D005846 1.7e-07 60.1 120 36.7
FAN14G3081 Fragaria x ananassa HOM05D000462 ORTHO05D005846 2.2e-07 59.7 114 33.3
Migut.N01674 Erythranthe guttata HOM05D000462 ORTHO05D005846 2.9e-07 59.3 120 31.7
Prupe.2G104700 Prunus persica HOM05D000462 ORTHO05D005846 2.9e-07 59.3 123 30.9
Atru.chr2.1657 Acer truncatum HOM05D000462 ORTHO05D005846 5.0e-07 58.5 118 30.5
AUR62015684 Chenopodium quinoa HOM05D000462 ORTHO05D005846 5.0e-07 58.5 107 37.4
Migut.N01672 Erythranthe guttata HOM05D000462 ORTHO05D005846 5.0e-07 58.5 68 44.1
CSS0030224 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 6.5e-07 58.2 122 30.3
CAN.G992.17 Capsicum annuum HOM05D000462 ORTHO05D005846 8.5e-07 57.8 120 32.5
PSO782G4146 Papaver somniferum HOM05D000462 ORTHO05D005846 8.5e-07 57.8 111 36.9
Solyc07g017470.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 1.1e-06 57.4 68 48.5
Nitab4.5_0000792g0060 Nicotiana tabacum HOM05D000462 ORTHO05D005846 1.4e-06 57.0 116 35.3
SalBow4G0191 Salvia bowleyana HOM05D009568 ORTHO05D011026 1.4e-06 57.0 116 32.8
EL10Ac4g07924 Beta vulgaris HOM05D000462 ORTHO05D005846 1.9e-06 56.6 146 30.1
DCAR_029565 Daucus carota HOM05D000462 ORTHO05D005846 1.9e-06 56.6 121 32.2
Os06g0112300 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D005846 1.9e-06 56.6 124 29.8
RcHm_v2.0_Chr1g0342371 Rosa chinensis HOM05D000462 ORTHO05D005846 2.5e-06 56.2 105 35.2
HPP92_014959 Vanilla planifolia HOM05D000462 ORTHO05D005846 2.5e-06 56.2 123 33.3
PSO063G2746 Papaver somniferum HOM05D000462 ORTHO05D005846 3.2e-06 55.8 111 35.1
arahy.Tifrunner.gnm1.ann1.L6NMZX Arachis hypogaea HOM05D000462 ORTHO05D005846 5.5e-06 55.1 67 44.8
CSS0047566 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 5.5e-06 55.1 122 29.5
DCAR_029563 Daucus carota HOM05D000462 ORTHO05D005846 5.5e-06 55.1 139 33.1
Rhsim07G0047100 Rhododendron simsii HOM05D000462 ORTHO05D005846 5.5e-06 55.1 72 41.7
Sed0002685 Sechium edule HOM05D000462 ORTHO05D005846 5.5e-06 55.1 120 31.7
arahy.Tifrunner.gnm1.ann1.AX2FME Arachis hypogaea HOM05D000462 ORTHO05D005846 7.2e-06 54.7 66 43.9
CANSAT78G2521 Cannabis sativa HOM05D000462 ORTHO05D005846 7.2e-06 54.7 108 34.3
CSS0023532 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 9.4e-06 54.3 122 32.0


User provided reference genes

Program Settings