Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 1.7e-97 359.4 187 100.0
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 1.0e-30 137.5 149 53.0
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 1.7e-28 130.2 185 47.0
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 3.5e-26 122.5 172 45.9
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 3.5e-26 122.5 167 46.7
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 6.6e-25 118.2 184 44.6
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 1.5e-24 117.1 169 44.4
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.9e-24 116.7 163 45.4
PSO782G1863 Papaver somniferum HOM05D005065 ORTHO05D005944 1.9e-24 116.7 184 41.3
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 3.3e-24 115.9 163 45.4
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.4e-22 110.5 197 41.6
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 2.3e-22 109.8 146 47.9
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 3.1e-22 109.4 175 44.6
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 3.1e-22 109.4 137 46.7
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 4.0e-22 109.0 158 43.0
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 4.0e-22 109.0 204 39.7
Manes.02G192500 Manihot esculenta HOM05D005065 ORTHO05D005944 5.2e-22 108.6 183 43.7
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 6.8e-22 108.2 144 46.5
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 1.5e-21 107.1 137 48.2
TAR624G0039 Trochodendron aralioides HOM05D005065 ORTHO05D005944 2.0e-21 106.7 157 42.7
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 2.6e-21 106.3 191 42.4
SalBow7G0321 Salvia bowleyana HOM05D005065 ORTHO05D005944 5.8e-21 105.1 145 46.9
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 7.5e-21 104.8 172 42.4
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 1.7e-20 103.6 187 42.2
Gohir.A13G121100 Gossypium hirsutum HOM05D005065 ORTHO05D005944 2.2e-20 103.2 163 40.5
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 2.2e-20 103.2 171 43.9
Oeu017883.1 Olea europaea HOM05D005065 ORTHO05D005944 2.2e-20 103.2 184 40.8
RcHm_v2.0_Chr6g0270871 Rosa chinensis HOM05D005065 ORTHO05D005944 2.9e-20 102.8 176 39.8
Gohir.D13G125200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 4.9e-20 102.1 163 39.9
Gorai.013G140100 Gossypium raimondii HOM05D005065 ORTHO05D005944 4.9e-20 102.1 163 39.9
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 4.9e-20 102.1 172 42.4
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 1.1e-19 100.9 162 42.6
FAN15G3279 Fragaria x ananassa HOM05D005065 ORTHO05D005944 1.4e-19 100.5 206 39.8
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 1.4e-19 100.5 159 41.5
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 1.9e-19 100.1 143 42.7
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 1.9e-19 100.1 132 43.2
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 2.4e-19 99.8 166 41.0
TWI60G1480 Tripterygium wilfordii HOM05D005065 ORTHO05D005944 3.2e-19 99.4 196 44.4
CiPaw.08G058800 Carya illinoinensis HOM05D005065 ORTHO05D005944 5.4e-19 98.6 208 36.5
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 5.4e-19 98.6 166 41.6
QL02p033454 Quercus lobata HOM05D005065 ORTHO05D005944 5.4e-19 98.6 200 39.5
Lalb_Chr03g0036131 Lupinus albus HOM05D005065 ORTHO05D005944 1.2e-18 97.4 166 41.0
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 1.6e-18 97.1 204 38.2
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 1.6e-18 97.1 177 42.9
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 2.1e-18 96.7 175 39.4
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 3.5e-18 95.9 165 44.2
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 4.6e-18 95.5 190 37.4
BcaB05g24697 Brassica carinata HOM05D005065 ORTHO05D005944 7.8e-18 94.7 189 38.6
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 1.0e-17 94.4 206 37.9
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 1.3e-17 94.0 171 40.9
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 1.3e-17 94.0 191 40.3
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 2.3e-17 93.2 172 39.0
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 3.9e-17 92.4 179 39.7
A02p17610 Brassica napus HOM05D005065 ORTHO05D005944 5.1e-17 92.0 152 36.2
BraA02t06807Z Brassica rapa HOM05D005065 ORTHO05D005944 5.1e-17 92.0 152 36.2
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 5.1e-17 92.0 170 38.2
Cpa.g.sc66.33 Carica papaya HOM05D005065 ORTHO05D005944 6.6e-17 91.7 190 37.4
Ciclev10002433m.g Citrus clementina HOM05D005065 ORTHO05D005944 8.6e-17 91.3 162 40.7
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 8.6e-17 91.3 191 37.2
CARHR064790 Cardamine hirsuta HOM05D005065 ORTHO05D005944 1.5e-16 90.5 160 36.9
A07p30470 Brassica napus HOM05D005065 ORTHO05D005944 1.9e-16 90.1 177 39.0
BolC6t38629H Brassica oleracea HOM05D005065 ORTHO05D005944 1.9e-16 90.1 178 42.1
BraA07t30683Z Brassica rapa HOM05D005065 ORTHO05D005944 1.9e-16 90.1 177 39.0
Eucgr.F04121 Eucalyptus grandis HOM05D005065 ORTHO05D005944 1.9e-16 90.1 145 41.4
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 1.9e-16 90.1 184 40.2
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 3.3e-16 89.4 172 43.0
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 3.3e-16 89.4 196 35.2
Carub.0002s1875 Capsella rubella HOM05D005065 ORTHO05D005944 4.3e-16 89.0 164 37.8
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 5.6e-16 88.6 153 38.6
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 7.3e-16 88.2 153 37.9
Psat6g187880 Pisum sativum HOM05D005065 ORTHO05D005944 9.5e-16 87.8 185 38.4
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 9.5e-16 87.8 147 40.1
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 1.6e-15 87.0 162 41.4
C06p35230 Brassica napus HOM05D005065 ORTHO05D005944 2.1e-15 86.7 179 40.8
PGR102G0471 Punica granatum HOM05D005065 ORTHO05D005944 2.1e-15 86.7 170 39.4
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 2.8e-15 86.3 209 34.4
AT1G71970 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 3.6e-15 85.9 169 37.3
Rhsim11G0058500 Rhododendron simsii HOM05D005065 ORTHO05D005944 3.6e-15 85.9 160 41.9
BcaC03g15318 Brassica carinata HOM05D005065 ORTHO05D005944 6.2e-15 85.1 161 34.2
C02p29260 Brassica napus HOM05D005065 ORTHO05D005944 6.2e-15 85.1 161 34.2
BolC2t08977H Brassica oleracea HOM05D005065 ORTHO05D005944 6.2e-15 85.1 161 34.2
Lsat_1_v5_gn_1_10621 Lactuca sativa HOM05D005065 ORTHO05D005944 8.1e-15 84.7 135 41.5
MD05G1042300 Malus domestica HOM05D005065 ORTHO05D005944 8.1e-15 84.7 184 40.2
Hma1.2p1_0060F.1_g032900 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 1.1e-14 84.3 187 37.4
Sabra19G0094300 Salix brachista HOM05D005065 ORTHO05D005944 1.4e-14 84.0 116 47.4
AL1G36220 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 3.1e-14 82.8 169 36.1
AL2G31580 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 3.1e-14 82.8 168 38.1
BraA07t31379Z Brassica rapa HOM05D005065 ORTHO05D005944 3.1e-14 82.8 180 35.6
SGA_v2.0_scaffold149G36582 Striga asiatica HOM05D005065 ORTHO05D005944 3.1e-14 82.8 169 34.9
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 4.0e-14 82.4 157 38.2
ClCG11G008090 Citrullus lanatus HOM05D005065 ORTHO05D005944 4.0e-14 82.4 155 37.4
MELO3C008125.2 Cucumis melo HOM05D005065 ORTHO05D005944 5.2e-14 82.0 148 38.5
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 5.2e-14 82.0 175 38.3
Sp5g27040 Schrenkiella parvula HOM05D005065 ORTHO05D005944 6.8e-14 81.6 156 34.0
BcaB03g14918 Brassica carinata HOM05D005065 ORTHO05D005944 8.9e-14 81.3 194 34.0
HanXRQChr05g0150531 Helianthus annuus HOM05D005065 ORTHO05D005944 8.9e-14 81.3 158 38.6
ATR0820G021 Amborella trichopoda HOM05D005065 ORTHO05D005944 1.2e-13 80.9 154 39.6
Lalb_Chr19g0129461 Lupinus albus HOM05D005065 ORTHO05D005944 1.5e-13 80.5 195 35.9
MBI09_g14012_MAGBIO Magnolia biondii HOM05D005065 ORTHO05D005944 1.5e-13 80.5 137 38.0
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 1.5e-13 80.5 181 35.4
BcaB03g15639 Brassica carinata HOM05D005065 ORTHO05D005944 4.4e-13 79.0 203 35.5
ATR0003G028 Amborella trichopoda HOM05D005065 ORTHO05D005944 7.6e-13 78.2 178 38.8
Lj5g0001381 Lotus japonicus HOM05D005065 ORTHO05D005944 7.6e-13 78.2 204 37.3
Sed0021334 Sechium edule HOM05D005065 ORTHO05D005944 2.2e-12 76.6 145 37.2
AT1G22680 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 2.9e-12 76.3 167 35.3
CARHR023050 Cardamine hirsuta HOM05D005065 ORTHO05D005944 2.9e-12 76.3 176 34.7
Thhalv10019856m.g Eutrema salsugineum HOM05D005065 ORTHO05D005944 2.9e-12 76.3 158 34.8
Sp1g20190 Schrenkiella parvula HOM05D005065 ORTHO05D005944 2.9e-12 76.3 161 35.4
BcaC08g46641 Brassica carinata HOM05D005065 ORTHO05D005944 4.9e-12 75.5 171 35.7
C06p46070 Brassica napus HOM05D005065 ORTHO05D005944 4.9e-12 75.5 171 35.1
BolC6t39660H Brassica oleracea HOM05D005065 ORTHO05D005944 4.9e-12 75.5 171 35.7
Lsat_1_v5_gn_6_109661 Lactuca sativa HOM05D005065 ORTHO05D005944 1.4e-11 73.9 166 34.9
Carub.0001s2220 Capsella rubella HOM05D005065 ORTHO05D005944 1.9e-11 73.6 174 37.4
HanXRQChr04g0107491 Helianthus annuus HOM05D005065 ORTHO05D005944 2.4e-11 73.2 164 39.0
Nitab4.5_0000277g0040 Nicotiana tabacum HOM05D005065 ORTHO05D005944 2.4e-11 73.2 144 42.4
Sopen06g023830 Solanum pennellii HOM05D005065 ORTHO05D005944 2.4e-11 73.2 152 37.5
Aa31LG4G8650 Aethionema arabicum HOM05D005065 ORTHO05D005944 3.2e-11 72.8 156 34.0
Oeu021210.1 Olea europaea HOM05D005065 ORTHO05D005944 4.1e-11 72.4 169 35.5
Ah.05g178140 Amaranthus hybridus HOM05D005065 ORTHO05D005944 7.1e-11 71.6 185 36.2
EL10Ac1g00090 Beta vulgaris HOM05D005065 ORTHO05D005944 7.1e-11 71.6 145 37.2
CDE06G2798 Ceratophyllum demersum HOM05D005065 ORTHO05D005944 7.1e-11 71.6 113 45.1
THA.LOC104809741 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 1.2e-10 70.9 198 33.3
SGA_v2.0_scaffold118G32491 Striga asiatica HOM05D005065 ORTHO05D005944 2.1e-10 70.1 136 34.6
FAN24G2022 Fragaria x ananassa HOM05D005065 ORTHO05D005944 4.6e-10 68.9 177 37.9
HPP92_009270 Vanilla planifolia HOM05D005065 ORTHO05D005944 4.6e-10 68.9 181 31.5
Sc23g0001280 Simmondsia chinensis HOM05D005065 ORTHO05D005944 6.0e-10 68.6 143 37.1
SGA_v2.0_scaffold24G10554 Striga asiatica HOM05D005065 ORTHO05D005944 7.8e-10 68.2 141 35.5
Sabra13G0095100 Salix brachista HOM05D005065 ORTHO05D005944 1.0e-09 67.8 160 36.9
FAN20G1873 Fragaria x ananassa HOM05D005065 ORTHO05D005944 2.3e-09 66.6 177 37.9
Gohir.D09G113300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 3.0e-09 66.2 162 30.9
THA.LOC104800116 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 3.9e-09 65.9 191 31.9
FvH4_2g11630 Fragaria vesca HOM05D005065 ORTHO05D005944 6.6e-09 65.1 127 40.9
CANSAT25G3119 Cannabis sativa HOM05D005065 ORTHO05D005944 8.6e-09 64.7 169 34.3
Gorai.006G130800 Gossypium raimondii HOM05D005065 ORTHO05D005944 1.1e-08 64.3 174 31.6
HPP92_006851 Vanilla planifolia HOM05D064031 ORTHO05D005944 1.1e-08 64.3 193 31.1
Gohir.A09G116200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.5e-08 63.9 167 31.1
Oeu025521.1 Olea europaea HOM05D005065 ORTHO05D005944 1.5e-08 63.9 163 35.0
A07p38140 Brassica napus HOM05D005065 ORTHO05D005944 3.3e-08 62.8 93 39.8
Nitab4.5_0009211g0010 Nicotiana tabacum HOM05D005065 ORTHO05D005944 3.3e-08 62.8 128 41.4
HPP92_006868 Vanilla planifolia HOM05D064031 ORTHO05D005944 5.6e-08 62.0 192 30.7
HPP92_005697 Vanilla planifolia HOM05D005065 ORTHO05D005944 2.8e-07 59.7 157 32.5
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 6.2e-07 58.5 135 31.1
Rhsim11G0058400 Rhododendron simsii HOM05D005065 ORTHO05D005944 3.1e-06 56.2 94 41.5


User provided reference genes

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