Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02272 Aquilegia oxysepala HOM05D005322 ORTHO05D006746 0.0e+00 1158.3 663 100.0
TAR381G1522 Trochodendron aralioides HOM05D005322 ORTHO05D006746 2.6e-84 317.4 301 57.1
Nn5g29007 Nelumbo nucifera HOM05D005322 ORTHO05D006746 2.6e-76 290.8 666 35.1
Nn4g23001 Nelumbo nucifera HOM05D005322 ORTHO05D006746 1.9e-74 284.6 673 34.3
PSO761G0065 Papaver somniferum HOM05D005322 ORTHO05D006746 1.9e-71 274.6 347 45.5
PSO210G4083 Papaver somniferum HOM05D005322 ORTHO05D006746 1.1e-69 268.9 381 44.1
Ciclev10026033m.g Citrus clementina HOM05D005322 ORTHO05D006746 3.8e-67 260.4 317 50.8
Manes.13G104500 Manihot esculenta HOM05D005322 ORTHO05D006746 5.0e-67 260.0 271 54.6
CiPaw.07G042000 Carya illinoinensis HOM05D005322 ORTHO05D006746 2.5e-66 257.7 482 37.3
Prupe.6G210300 Prunus persica HOM05D005322 ORTHO05D006746 2.7e-65 254.2 486 38.7
Dinv36981 Davidia involucrata HOM05D005322 ORTHO05D006746 3.6e-65 253.8 272 53.3
Cfa006826 Carpinus fangiana HOM05D005322 ORTHO05D006746 4.7e-65 253.4 503 37.6
Manes.12G121000 Manihot esculenta HOM05D005322 ORTHO05D006746 7.9e-65 252.7 396 44.7
Potri.018G000700 Populus trichocarpa HOM05D005322 ORTHO05D006746 7.9e-65 252.7 316 50.9
TWI74G0553 Tripterygium wilfordii HOM05D005322 ORTHO05D006746 2.3e-64 251.1 282 49.6
Atru.chr3.1164 Acer truncatum HOM05D005322 ORTHO05D006746 3.9e-64 250.4 470 37.2
ClCG01G018150 Citrullus lanatus HOM05D005322 ORTHO05D006746 6.7e-64 249.6 497 39.6
Atru.chr3.1145 Acer truncatum HOM05D005322 ORTHO05D006746 8.8e-64 249.2 470 37.0
CSS0048225 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 1.1e-63 248.8 358 45.8
Haze_03937 Corylus avellana HOM05D005322 ORTHO05D006746 3.3e-63 247.3 490 38.4
Potri.006G280800 Populus trichocarpa HOM05D005322 ORTHO05D006746 3.3e-63 247.3 303 48.8
RcHm_v2.0_Chr2g0109931 Rosa chinensis HOM05D005322 ORTHO05D006746 7.4e-63 246.1 281 50.9
TWI77G0556 Tripterygium wilfordii HOM05D005322 ORTHO05D006746 7.4e-63 246.1 316 45.9
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 1.3e-62 245.4 298 49.3
QL06p037497 Quercus lobata HOM05D005322 ORTHO05D006746 1.7e-62 245.0 321 46.7
Hund25262 Selenicereus undatus HOM05D005322 ORTHO05D006746 3.7e-62 243.8 313 48.2
Duzib264G0018 Durio zibethinus HOM05D005322 ORTHO05D006746 4.1e-61 240.4 315 46.3
Rhsim07G0215300 Rhododendron simsii HOM05D005322 ORTHO05D006746 5.3e-61 240.0 283 51.6
MBI16_g26241_MAGBIO Magnolia biondii HOM05D005322 ORTHO05D006746 9.1e-61 239.2 330 45.2
CSS0004865 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 2.0e-60 238.0 286 49.0
CSS0043740 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 2.0e-60 238.0 286 49.0
Gorai.007G058000 Gossypium raimondii HOM05D005322 ORTHO05D006746 2.0e-60 238.0 275 50.5
Gohir.A11G049800 Gossypium hirsutum HOM05D005322 ORTHO05D006746 2.6e-60 237.7 372 41.7
Cpa.g.sc129.20 Carica papaya HOM05D005322 ORTHO05D006746 1.3e-59 235.3 278 50.4
MELO3C007693.2 Cucumis melo HOM05D005322 ORTHO05D006746 1.4e-58 231.9 505 37.8
MD01G1045600 Malus domestica HOM05D005322 ORTHO05D006746 1.4e-58 231.9 481 38.3
MD15G1306300 Malus domestica HOM05D005322 ORTHO05D006746 1.9e-58 231.5 468 38.7
Gohir.D11G053300 Gossypium hirsutum HOM05D005322 ORTHO05D006746 5.5e-58 229.9 367 41.4
Glyma.01G019600 Glycine max HOM05D005322 ORTHO05D006746 1.2e-57 228.8 275 46.5
Thecc.01G083200 Theobroma cacao HOM05D005322 ORTHO05D006746 1.2e-57 228.8 290 49.7
CsaV3_6G044720 Cucumis sativus L. HOM05D005322 ORTHO05D006746 2.1e-57 228.0 484 37.6
FAN28G0408 Fragaria x ananassa HOM05D005322 ORTHO05D006746 4.7e-57 226.9 280 48.2
Gorai.003G035800 Gossypium raimondii HOM05D005322 ORTHO05D006746 4.7e-57 226.9 335 43.9
Lj2g0022469 Lotus japonicus HOM05D005322 ORTHO05D006746 8.0e-57 226.1 282 46.1
FvH4_1g18920 Fragaria vesca HOM05D005322 ORTHO05D006746 1.0e-56 225.7 487 35.7
Oeu050977.1 Olea europaea HOM05D005322 ORTHO05D006746 2.3e-56 224.6 421 37.5
FAN19G2338 Fragaria x ananassa HOM05D005322 ORTHO05D006746 3.0e-56 224.2 487 35.7
Gohir.D03G034100 Gossypium hirsutum HOM05D005322 ORTHO05D006746 5.2e-56 223.4 326 44.2
FAN23G1375 Fragaria x ananassa HOM05D005322 ORTHO05D006746 6.7e-56 223.0 283 48.1
Hma1.2p1_0080F.1_g042150 Hydrangea macrophylla HOM05D005322 ORTHO05D006746 6.7e-56 223.0 430 40.0
Medtr7g076850 Medicago truncatula HOM05D005322 ORTHO05D006746 8.8e-56 222.6 285 47.0
THA.LOC104807095 Tarenaya hassleriana HOM05D005322 ORTHO05D006746 1.1e-55 222.2 419 39.1
CANSAT11G0958 Cannabis sativa HOM05D005322 ORTHO05D006746 1.5e-55 221.9 283 45.9
Sc22g0002020 Simmondsia chinensis HOM05D005322 ORTHO05D006746 1.5e-55 221.9 275 50.5
Ca_25206_v3 Cicer arietinum L. HOM05D005322 ORTHO05D006746 3.3e-55 220.7 278 47.5
Aa31LG6G14810 Aethionema arabicum HOM05D005322 ORTHO05D006746 1.7e-54 218.4 335 43.9
Duzib147G0396 Durio zibethinus HOM05D005322 ORTHO05D006746 2.2e-54 218.0 291 48.5
Sed0015871 Sechium edule HOM05D005322 ORTHO05D006746 2.2e-54 218.0 304 47.7
Oeu030825.1 Olea europaea HOM05D005322 ORTHO05D006746 3.7e-54 217.2 278 46.0
CAN.G179.11 Capsicum annuum HOM05D005322 ORTHO05D006746 1.1e-53 215.7 367 39.8
Lalb_Chr05g0216181 Lupinus albus HOM05D005322 ORTHO05D006746 1.1e-53 215.7 375 40.3
ECA232G1574 Erigeron canadensis HOM05D005322 ORTHO05D006746 5.3e-53 213.4 466 35.4
Psat2g134960 Pisum sativum HOM05D005322 ORTHO05D006746 5.3e-53 213.4 279 46.2
Solyc01g068540.3 Solanum lycopersicum HOM05D005322 ORTHO05D006746 5.3e-53 213.4 278 44.2
Sopen01g030500 Solanum pennellii HOM05D005322 ORTHO05D006746 7.0e-53 213.0 278 44.2
Medtr5g030750 Medicago truncatula HOM05D005322 ORTHO05D006746 1.6e-52 211.8 279 45.5
vmacro11204 Vaccinium macrocarpon HOM05D005322 ORTHO05D006746 5.9e-52 209.9 331 42.9
AUR62002656 Chenopodium quinoa HOM05D005322 ORTHO05D006746 7.7e-52 209.5 344 41.6
Cc07_g07800 Coffea canephora HOM05D005322 ORTHO05D006746 1.0e-51 209.1 272 45.6
ECA238G0277 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.7e-51 208.4 467 35.1
Phvul.002G142700 Phaseolus vulgaris HOM05D005322 ORTHO05D006746 1.7e-51 208.4 275 44.4
MSTRG.8297 Avicennia marina HOM05D005322 ORTHO05D006746 3.8e-51 207.2 388 37.4
arahy.Tifrunner.gnm1.ann1.072AWD Arachis hypogaea HOM05D005322 ORTHO05D006746 5.0e-51 206.8 280 45.4
arahy.Tifrunner.gnm1.ann1.BDDW1F Arachis hypogaea HOM05D005322 ORTHO05D006746 5.0e-51 206.8 280 45.4
Lj5A206G51 Lonicera japonica HOM05D005322 ORTHO05D006746 6.5e-51 206.5 294 44.9
Nitab4.5_0002103g0070 Nicotiana tabacum HOM05D005322 ORTHO05D006746 1.1e-50 205.7 385 38.4
Psat5g132240 Pisum sativum HOM05D005322 ORTHO05D006746 1.1e-50 205.7 274 45.6
AUR62044121 Chenopodium quinoa HOM05D005322 ORTHO05D006746 1.5e-50 205.3 342 41.2
Glyma.09G203100 Glycine max HOM05D005322 ORTHO05D006746 3.2e-50 204.1 270 44.4
SGA_v2.0_scaffold76G25043 Striga asiatica HOM05D005322 ORTHO05D006746 5.5e-50 203.4 342 41.2
Thhalv10010289m.g Eutrema salsugineum HOM05D005322 ORTHO05D006746 1.6e-49 201.8 289 43.3
THA.LOC104807657 Tarenaya hassleriana HOM05D005322 ORTHO05D006746 1.6e-49 201.8 308 43.8
HanXRQChr12g0355811 Helianthus annuus HOM05D005322 ORTHO05D006746 2.1e-49 201.4 295 43.7
Ah.02g129230 Amaranthus hybridus HOM05D005322 ORTHO05D006746 2.7e-49 201.1 309 41.7
ECA238G4016 Erigeron canadensis HOM05D005322 ORTHO05D006746 3.6e-49 200.7 281 44.1
Phvul.010G030900 Phaseolus vulgaris HOM05D005322 ORTHO05D006746 6.1e-49 199.9 275 43.6
Sp5g08900 Schrenkiella parvula HOM05D005322 ORTHO05D006746 2.3e-48 198.0 305 43.3
A09p46440 Brassica napus HOM05D005322 ORTHO05D006746 4.0e-48 197.2 285 41.8
BraA09t40109Z Brassica rapa HOM05D005322 ORTHO05D006746 4.0e-48 197.2 285 41.8
EL10Ac6g13300 Beta vulgaris HOM05D005322 ORTHO05D006746 8.8e-48 196.1 396 37.1
Gohir.A02G146400 Gossypium hirsutum HOM05D005322 ORTHO05D006746 8.8e-48 196.1 307 44.0
BcaB01g00273 Brassica carinata HOM05D005322 ORTHO05D006746 1.2e-47 195.7 272 45.2
CARHR163340 Cardamine hirsuta HOM05D005322 ORTHO05D006746 1.2e-47 195.7 308 42.5
C08p28800 Brassica napus HOM05D005322 ORTHO05D006746 2.6e-47 194.5 271 43.9
HPP92_000395 Vanilla planifolia HOM05D005322 ORTHO05D006746 5.7e-47 193.4 355 40.3
BcaB01g00278 Brassica carinata HOM05D005322 ORTHO05D006746 1.3e-46 192.2 271 43.5
BolC8t50481H Brassica oleracea HOM05D005322 ORTHO05D006746 1.3e-46 192.2 271 43.5
Zm00001eb297530 Zea mays HOM05D005322 ORTHO05D006746 1.7e-46 191.8 347 38.3
TPR.G30490 Trifolium pratense HOM05D005322 ORTHO05D006746 2.8e-46 191.0 280 41.8
Lsat_1_v5_gn_2_82180 Lactuca sativa HOM05D005322 ORTHO05D006746 3.7e-46 190.7 312 43.6
Actinidia11927 Actinidia chinensis HOM05D005322 ORTHO05D006746 4.8e-46 190.3 319 37.9
Migut.F01569 Erythranthe guttata HOM05D005322 ORTHO05D006746 1.1e-45 189.1 498 34.3
PGR031G1473 Punica granatum HOM05D005322 ORTHO05D006746 3.1e-45 187.6 316 41.1
Carub.0005s2001 Capsella rubella HOM05D005322 ORTHO05D006746 7.7e-44 183.0 310 40.3
AL5G34360 Arabidopsis lyrata HOM05D005322 ORTHO05D006746 1.0e-43 182.6 287 42.5
Peaxi162Scf00309g00413 Petunia axillaris HOM05D005322 ORTHO05D006746 2.9e-43 181.0 402 34.8
AT3G53440 Arabidopsis thaliana HOM05D005322 ORTHO05D006746 3.2e-42 177.6 289 41.9
Zm00001eb345110 Zea mays HOM05D005322 ORTHO05D006746 3.0e-40 171.0 277 41.2
SalBow6G3962 Salvia bowleyana HOM05D005322 ORTHO05D006746 3.4e-39 167.5 253 44.3
Nitab4.5_0001888g0010 Nicotiana tabacum HOM05D005322 ORTHO05D006746 1.8e-37 161.8 251 43.0
CDE01G0382 Ceratophyllum demersum HOM05D005322 ORTHO05D006746 1.7e-35 155.2 267 38.6
PGSC0003DMG400000839 Solanum tuberosum HOM05D000365 ORTHO05D000154 1.8e-32 145.2 198 42.9
GSVIVG01008306001 Vitis vinifera HOM05D005322 ORTHO05D006746 3.0e-32 144.4 135 54.8
Nitab4.5_0008618g0020 Nicotiana tabacum HOM05D005322 ORTHO05D006746 1.8e-29 135.2 237 39.7
DCAR_025854 Daucus carota HOM05D005322 ORTHO05D006746 1.2e-28 132.5 254 38.2
SHI12143 Sapria himalayana HOM05D005322 ORTHO05D006746 5.6e-26 123.6 246 41.1
Actinidia36382 Actinidia chinensis HOM05D005322 ORTHO05D006746 3.6e-25 120.9 162 44.4
VMungo0464G0122 Vigna mungo HOM05D000074 ORTHO05D006746 1.5e-23 115.5 244 35.2
unitig_62.g23938 Utricularia gibba HOM05D005322 ORTHO05D006746 1.6e-20 105.5 282 31.6
ATR0807G165 Amborella trichopoda HOM05D005322 ORTHO05D006746 4.6e-20 104.0 127 44.1
Zm00001eb345140 Zea mays HOM05D005322 ORTHO05D006746 1.1e-18 99.4 266 30.5
Rhsim10G0081400 Rhododendron simsii HOM05D005322 ORTHO05D006746 4.3e-18 97.4 240 35.8
SEGI_41064 Sequoiadendron giganteum HOM05D005322 ORTHO05D006746 5.6e-18 97.1 239 32.2
SEGI_16708 Sequoiadendron giganteum HOM05D005322 ORTHO05D006746 2.8e-17 94.7 283 30.0
AagrBONN_evm.TU.Sc2ySwM_368.532 Anthoceros agrestis HOM05D005322 ORTHO05D006746 2.0e-15 88.6 275 28.4
Mapoly0062s0031 Marchantia polymorpha HOM05D005322 ORTHO05D006746 1.9e-13 82.0 298 26.5
MBI16_g31813_MAGBIO Magnolia biondii HOM05D005322 ORTHO05D006746 4.1e-13 80.9 175 33.7
Sabra18G0005500 Salix brachista HOM05D005322 ORTHO05D006746 2.9e-06 58.2 61 44.3
TAR625G0743 Trochodendron aralioides HOM05D005322 ORTHO05D006746 4.9e-06 57.4 75 48.0


User provided reference genes

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