Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 1.1e-245 853.2 548 100.0
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 9.0e-123 444.9 561 56.5
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 8.7e-118 428.3 561 60.6
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 6.1e-111 405.6 550 60.7
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 1.1e-107 394.8 552 54.9
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 2.4e-107 393.7 550 61.1
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 1.4e-104 384.4 562 58.9
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 3.6e-103 379.8 558 50.4
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 1.8e-102 377.5 559 58.5
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 5.1e-102 375.9 552 57.8
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 1.5e-101 374.4 473 64.1
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 2.4e-99 367.1 506 61.1
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 9.1e-99 365.2 506 52.8
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 1.2e-98 364.8 558 55.9
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 4.5e-98 362.8 543 58.7
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 1.1e-96 358.2 559 50.6
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 1.0e-94 351.7 560 50.2
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 1.8e-94 350.9 509 54.4
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 3.9e-94 349.7 491 58.9
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 1.3e-92 344.7 543 49.7
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 1.3e-92 344.7 484 63.8
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 8.2e-92 342.0 554 55.8
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 1.4e-91 341.3 498 53.6
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 5.3e-91 339.3 507 51.3
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 2.6e-90 337.0 497 58.8
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 3.5e-90 336.7 554 55.4
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 4.5e-90 336.3 554 55.2
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 4.5e-90 336.3 496 50.8
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 5.9e-90 335.9 555 55.7
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 2.2e-89 334.0 541 48.6
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 5.0e-89 332.8 495 56.8
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 5.0e-89 332.8 528 49.8
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 6.5e-89 332.4 499 56.3
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 6.5e-89 332.4 550 56.5
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 4.2e-88 329.7 546 56.2
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 4.2e-88 329.7 551 54.8
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 1.2e-87 328.2 551 56.8
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 1.8e-86 324.3 472 54.0
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 5.2e-86 322.8 519 50.7
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 5.2e-86 322.8 543 47.5
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 8.8e-86 322.0 500 56.4
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 1.5e-85 321.2 594 53.2
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 3.3e-85 320.1 520 49.4
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 3.7e-84 316.6 433 57.0
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 1.4e-83 314.7 522 50.4
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 1.4e-83 314.7 522 50.2
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 4.1e-83 313.2 529 48.4
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 4.1e-83 313.2 423 55.3
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 4.5e-82 309.7 574 47.7
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 3.8e-81 306.6 482 58.9
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 5.0e-81 306.2 493 47.9
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 3.2e-80 303.5 520 46.2
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 1.2e-79 301.6 559 47.2
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 1.8e-78 297.7 461 52.5
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 5.2e-78 296.2 554 52.5
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 6.3e-76 289.3 554 52.2
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 1.2e-74 285.0 494 49.0
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 1.6e-74 284.6 504 54.4
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 2.0e-74 284.3 478 52.1
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 4.5e-74 283.1 373 62.7
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 4.5e-74 283.1 470 48.3
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 1.7e-73 281.2 370 61.6
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 1.9e-72 277.7 514 46.7
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 2.3e-70 270.8 446 52.7
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 9.8e-69 265.4 485 46.8
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 2.8e-68 263.8 563 33.9
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 7.0e-67 259.2 470 47.4
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 2.7e-66 257.3 285 51.9
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 6.6e-65 252.7 342 57.6
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 2.3e-62 244.2 309 63.4
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 3.0e-62 243.8 481 35.8
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 2.9e-60 237.3 503 43.1
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 8.3e-60 235.7 513 33.5
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 1.4e-59 235.0 271 49.4
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 5.4e-59 233.0 282 49.6
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 5.0e-57 226.5 255 49.4
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 8.6e-57 225.7 293 45.4
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 5.6e-56 223.0 500 50.2
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 1.2e-53 215.3 268 47.8
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 3.4e-53 213.8 494 40.7
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 1.1e-46 192.2 325 62.5
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 6.8e-46 189.5 326 62.6
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 2.8e-39 167.5 183 49.7
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 1.7e-36 158.3 133 58.6
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 5.1e-33 146.7 239 60.7
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 1.5e-32 145.2 413 31.7
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.1e-30 139.0 123 56.9
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.5e-29 135.2 99 66.7
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 1.9e-27 128.3 398 47.2
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 1.6e-26 125.2 184 42.9
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 1.5e-24 118.6 118 55.1
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 1.6e-23 115.2 117 48.7
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 4.5e-21 107.1 75 61.3
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 7.6e-21 106.3 454 30.4
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 3.8e-20 104.0 89 52.8
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 9.3e-19 99.4 431 33.4
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 6.7e-17 93.2 183 41.0
arahy.Tifrunner.gnm1.ann1.EIPD4W Arachis hypogaea HOM05D006674 ORTHO05D007954 1.1e-16 92.4 106 48.1
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 1.9e-16 91.7 183 35.5
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 2.5e-16 91.3 199 37.7
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 3.1e-14 84.3 117 42.7
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 1.7e-12 78.6 66 54.5
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 7.1e-11 73.2 52 65.4
CSS0039398 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 9.3e-11 72.8 48 72.9
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 1.2e-10 72.4 127 37.8
Zm00001eb221070 Zea mays HOM05D006674 ORTHO05D007954 3.9e-09 67.4 175 25.7
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 1.1e-08 65.9 175 32.0
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 1.9e-08 65.1 265 27.2
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 1.9e-08 65.1 140 33.6
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 1.9e-08 65.1 57 57.9
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 3.1e-06 57.8 80 45.0
arahy.Tifrunner.gnm1.ann1.MX1HDN Arachis hypogaea HOM05D006674 ORTHO05D007954 6.9e-06 56.6 42 61.9
arahy.Tifrunner.gnm1.ann1.PS0MXP Arachis hypogaea HOM05D006674 ORTHO05D007954 6.9e-06 56.6 42 61.9


User provided reference genes

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