Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02254 Aquilegia oxysepala HOM05D005858 ORTHO05D006982 6.9e-50 200.3 98 100.0
Aqoxy7G03242 Aquilegia oxysepala HOM05D005858 ORTHO05D006982 1.1e-39 166.4 142 64.8
Prupe.1G097500 Prunus persica HOM05D005858 ORTHO05D006982 1.4e-21 106.3 141 42.6
Nn8g40237 Nelumbo nucifera HOM05D005858 ORTHO05D006982 3.0e-21 105.1 143 44.1
Rhsim01G0012300 Rhododendron simsii HOM05D005858 ORTHO05D006982 1.1e-20 103.2 110 50.9
RcHm_v2.0_Chr4g0404961 Rosa chinensis HOM05D005858 ORTHO05D006982 7.4e-20 100.5 139 41.0
FvH4_4g09670 Fragaria vesca HOM05D005858 ORTHO05D006982 1.7e-19 99.4 139 41.7
FAN12G2717 Fragaria x ananassa HOM05D005858 ORTHO05D006982 1.7e-19 99.4 139 41.7
Duzib187G2004 Durio zibethinus HOM05D005858 ORTHO05D006982 2.8e-19 98.6 141 42.6
SalBow6G6404 Salvia bowleyana HOM05D005858 ORTHO05D006982 2.8e-19 98.6 143 39.9
TAR383G0158 Trochodendron aralioides HOM05D005858 ORTHO05D006982 3.7e-19 98.2 143 42.0
Cfa013549 Carpinus fangiana HOM05D005858 ORTHO05D006982 4.8e-19 97.8 141 38.3
Nn2g12544 Nelumbo nucifera HOM05D005858 ORTHO05D006982 4.8e-19 97.8 143 41.3
QL02p095637 Quercus lobata HOM05D005858 ORTHO05D006982 4.8e-19 97.8 138 38.4
FAN12G2910 Fragaria x ananassa HOM05D005858 ORTHO05D006982 8.2e-19 97.1 139 40.3
FAN22G1041 Fragaria x ananassa HOM05D005858 ORTHO05D006982 8.2e-19 97.1 139 41.0
MD13G1260700 Malus domestica HOM05D005858 ORTHO05D006982 8.2e-19 97.1 141 39.7
COL.COLO4_04533 Corchorus olitorius HOM05D005858 ORTHO05D006982 1.4e-18 96.3 142 40.1
Lj9A728G21 Lonicera japonica HOM05D005858 ORTHO05D006982 1.4e-18 96.3 107 46.7
Thecc.09G160700 Theobroma cacao HOM05D005858 ORTHO05D006982 1.4e-18 96.3 141 40.4
Nitab4.5_0005551g0040 Nicotiana tabacum HOM05D005858 ORTHO05D006982 1.8e-18 95.9 107 51.4
Sabra18G0085500 Salix brachista HOM05D005858 ORTHO05D006982 2.4e-18 95.5 142 38.7
Atru.chr7.494 Acer truncatum HOM05D005858 ORTHO05D006982 5.3e-18 94.4 145 39.3
Manes.06G025900 Manihot esculenta HOM05D005858 ORTHO05D006982 1.6e-17 92.8 143 39.2
Potri.018G099000 Populus trichocarpa HOM05D005858 ORTHO05D006982 1.6e-17 92.8 142 38.7
Actinidia20954 Actinidia chinensis HOM05D005858 ORTHO05D006982 2.0e-17 92.4 145 40.7
CiPaw.08G040300 Carya illinoinensis HOM05D005858 ORTHO05D006982 2.0e-17 92.4 140 36.4
FAN07G0488 Fragaria x ananassa HOM05D005858 ORTHO05D006982 2.6e-17 92.0 139 39.6
FAN17G1719 Fragaria x ananassa HOM05D005858 ORTHO05D006982 2.6e-17 92.0 139 39.6
PSO782G0888 Papaver somniferum HOM05D005858 ORTHO05D006982 2.6e-17 92.0 146 38.4
Ciclev10008554m.g Citrus clementina HOM05D005858 ORTHO05D006982 3.5e-17 91.7 143 40.6
Sopen07g002410 Solanum pennellii HOM05D005858 ORTHO05D006982 4.5e-17 91.3 143 39.9
PGSC0003DMG400011172 Solanum tuberosum HOM05D005858 ORTHO05D006982 5.9e-17 90.9 143 39.2
GSVIVG01023724001 Vitis vinifera HOM05D005858 ORTHO05D006982 1.0e-16 90.1 143 39.9
GSVIVG01023744001 Vitis vinifera HOM05D005858 ORTHO05D006982 1.3e-16 89.7 143 39.9
Peaxi162Scf00525g00820 Petunia axillaris HOM05D005858 ORTHO05D006982 2.2e-16 89.0 143 38.5
Migut.J01417 Erythranthe guttata HOM05D005858 ORTHO05D006982 2.9e-16 88.6 143 37.1
Nitab4.5_0005985g0060 Nicotiana tabacum HOM05D005858 ORTHO05D006982 2.9e-16 88.6 107 50.5
Duzib168G1554 Durio zibethinus HOM05D005858 ORTHO05D006982 5.0e-16 87.8 141 37.6
Dinv42786 Davidia involucrata HOM05D005858 ORTHO05D006982 8.5e-16 87.0 92 51.1
Dinv43315 Davidia involucrata HOM05D005858 ORTHO05D006982 8.5e-16 87.0 92 51.1
Oeu035673.1 Olea europaea HOM05D005858 ORTHO05D006982 8.5e-16 87.0 143 37.8
CAN.G1870.1 Capsicum annuum HOM05D005858 ORTHO05D006982 1.5e-15 86.3 143 37.8
Haze_22170 Corylus avellana HOM05D005858 ORTHO05D006982 3.2e-15 85.1 117 39.3
Gohir.D04G086000 Gossypium hirsutum HOM05D005858 ORTHO05D006982 4.2e-15 84.7 141 36.9
Dinv41306 Davidia involucrata HOM05D005858 ORTHO05D006982 5.5e-15 84.3 145 37.2
Gorai.012G096000 Gossypium raimondii HOM05D005858 ORTHO05D006982 5.5e-15 84.3 141 36.9
Gohir.A05G345842 Gossypium hirsutum HOM05D005858 ORTHO05D006982 7.2e-15 84.0 141 36.2
Lalb_Chr12g0199051 Lupinus albus HOM05D005858 ORTHO05D006982 9.4e-15 83.6 138 37.0
Gorai.004G103900 Gossypium raimondii HOM05D005858 ORTHO05D006982 1.6e-14 82.8 141 35.5
Cc06_g14020 Coffea canephora HOM05D005858 ORTHO05D006982 2.1e-14 82.4 145 35.2
Lj4g0010700 Lotus japonicus HOM05D005858 ORTHO05D006982 2.1e-14 82.4 138 34.1
VMungo1215G2346 Vigna mungo HOM05D005858 ORTHO05D006982 2.7e-14 82.0 138 34.8
Glyma.17G068700 Glycine max HOM05D005858 ORTHO05D006982 3.6e-14 81.6 135 34.1
Phvul.003G151200 Phaseolus vulgaris HOM05D005858 ORTHO05D006982 6.1e-14 80.9 138 34.1
Gohir.D08G097150 Gossypium hirsutum HOM05D005858 ORTHO05D006982 8.0e-14 80.5 141 34.8
Glyma.13G091600 Glycine max HOM05D005858 ORTHO05D006982 1.0e-13 80.1 138 33.3
MD16G1262400 Malus domestica HOM05D005858 ORTHO05D006982 1.8e-13 79.3 165 34.5
Medtr4g129510 Medicago truncatula HOM05D005858 ORTHO05D006982 1.8e-13 79.3 136 36.8
MBI14_g08081_MAGBIO Magnolia biondii HOM05D005858 ORTHO05D006982 3.0e-13 78.6 139 36.7
Gohir.A08G096524 Gossypium hirsutum HOM05D005858 ORTHO05D006982 4.0e-13 78.2 141 34.8
TWI32G1032 Tripterygium wilfordii HOM05D005858 ORTHO05D006982 4.0e-13 78.2 141 34.8
Eucgr.C00211 Eucalyptus grandis HOM05D005858 ORTHO05D006982 6.8e-13 77.4 53 66.0
CSS0006326 Camellia sinensis var. sinensis HOM05D005858 ORTHO05D006982 8.8e-13 77.0 51 70.6
Thhalv10013683m.g Eutrema salsugineum HOM05D005858 ORTHO05D006982 4.4e-12 74.7 142 38.0
Psat0s235g0040 Pisum sativum HOM05D005858 ORTHO05D006982 7.5e-12 73.9 137 32.1
TPR.G5337 Trifolium pratense HOM05D005858 ORTHO05D006982 7.5e-12 73.9 137 31.4
AT5G57770 Arabidopsis thaliana HOM05D005858 ORTHO05D006982 1.3e-11 73.2 142 35.9
PGR142G1620 Punica granatum HOM05D005858 ORTHO05D006982 1.3e-11 73.2 148 35.1
Sp6g19450 Schrenkiella parvula HOM05D005858 ORTHO05D006982 2.2e-11 72.4 142 35.2
AL8G33800 Arabidopsis lyrata HOM05D005858 ORTHO05D006982 2.8e-11 72.0 142 35.9
Carub.0008s1828 Capsella rubella HOM05D005858 ORTHO05D006982 2.8e-11 72.0 142 35.9
CARHR271500 Cardamine hirsuta HOM05D005858 ORTHO05D006982 4.8e-11 71.2 145 34.5
Hund08985 Selenicereus undatus HOM05D005858 ORTHO05D006982 8.3e-11 70.5 142 36.6
Aa31LG3G13600 Aethionema arabicum HOM05D005858 ORTHO05D006982 1.1e-10 70.1 140 34.3
CiPaw.08G172300 Carya illinoinensis HOM05D005858 ORTHO05D006982 1.1e-10 70.1 47 68.1
Ca_21182_v3 Cicer arietinum L. HOM05D005858 ORTHO05D006982 1.1e-10 70.1 136 33.1
ECA234G1989 Erigeron canadensis HOM05D005858 ORTHO05D006982 1.4e-10 69.7 143 32.2
SGA_v2.0_scaffold66G22516 Striga asiatica HOM05D005858 ORTHO05D006982 1.8e-10 69.3 142 30.3
Sc08g0005620 Simmondsia chinensis HOM05D005858 ORTHO05D006982 3.1e-10 68.6 141 35.5
Lsat_1_v5_gn_5_87041 Lactuca sativa HOM05D005858 ORTHO05D006982 4.1e-10 68.2 143 32.9
Hund08986 Selenicereus undatus HOM05D005858 ORTHO05D006982 4.1e-10 68.2 142 35.2
Hund26407 Selenicereus undatus HOM05D005858 ORTHO05D006982 5.4e-10 67.8 49 65.3
BcaB05g22374 Brassica carinata HOM05D005858 ORTHO05D006982 9.1e-10 67.0 143 34.3
BcaB05g22372 Brassica carinata HOM05D005858 ORTHO05D006982 1.2e-09 66.6 138 35.5
DCAR_017943 Daucus carota HOM05D005858 ORTHO05D006982 1.2e-09 66.6 145 33.8
EL10Ac8g18869 Beta vulgaris HOM05D005858 ORTHO05D006982 2.0e-09 65.9 142 33.1
CANSAT11G0936 Cannabis sativa HOM05D005858 ORTHO05D006982 2.0e-09 65.9 138 31.2
AUR62028410 Chenopodium quinoa HOM05D005858 ORTHO05D006982 3.5e-09 65.1 49 61.2
AUR62039752 Chenopodium quinoa HOM05D005858 ORTHO05D006982 3.5e-09 65.1 49 61.2
HanXRQChr10g0306461 Helianthus annuus HOM05D005858 ORTHO05D006982 1.0e-08 63.5 143 30.8
BcaC03g18565 Brassica carinata HOM05D005858 ORTHO05D006982 2.2e-08 62.4 144 31.9
C02p13870 Brassica napus HOM05D005858 ORTHO05D006982 2.2e-08 62.4 144 31.9
BolC2t07506H Brassica oleracea HOM05D005858 ORTHO05D006982 2.2e-08 62.4 144 31.9
HanXRQChr12g0358041 Helianthus annuus HOM05D005858 ORTHO05D006982 2.2e-08 62.4 143 28.7
A10p15140 Brassica napus HOM05D005858 ORTHO05D006982 2.9e-08 62.0 144 31.9
BraA10t43597Z Brassica rapa HOM05D005858 ORTHO05D006982 2.9e-08 62.0 144 31.9
Lalb_Chr07g0180091 Lupinus albus HOM05D005858 ORTHO05D006982 3.8e-08 61.6 50 56.0
A02p08210 Brassica napus HOM05D005858 ORTHO05D006982 5.0e-08 61.2 144 30.6
BraA02t05894Z Brassica rapa HOM05D005858 ORTHO05D006982 5.0e-08 61.2 144 30.6
C09p49650 Brassica napus HOM05D005858 ORTHO05D006982 1.1e-07 60.1 130 33.1
BcaB08g36142 Brassica carinata HOM05D005858 ORTHO05D006982 1.9e-07 59.3 143 32.2
THA.LOC104817811 Tarenaya hassleriana HOM05D005858 ORTHO05D006982 3.2e-07 58.5 131 32.8
ClCG06G012900 Citrullus lanatus HOM05D005858 ORTHO05D006982 4.2e-07 58.2 135 31.1
Sed0010280 Sechium edule HOM05D005858 ORTHO05D006982 5.5e-07 57.8 43 60.5
BcaC04g19930 Brassica carinata HOM05D005858 ORTHO05D006982 7.2e-07 57.4 143 28.7
BolC9t57817H Brassica oleracea HOM05D005858 ORTHO05D006982 7.2e-07 57.4 143 28.7
ATR0580G055 Amborella trichopoda HOM05D005858 ORTHO05D006982 2.1e-06 55.8 75 38.7
arahy.Tifrunner.gnm1.ann1.TG9B3Q Arachis hypogaea HOM05D005858 ORTHO05D006982 2.1e-06 55.8 125 32.0


User provided reference genes

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