Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02135 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 3.1e-274 948.0 517 100.0
Aqoxy4G00650 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 9.3e-263 909.8 517 97.1
TAR625G1059 Trochodendron aralioides HOM05D007736 ORTHO05D009783 6.8e-64 249.2 550 35.8
Dinv19331 Davidia involucrata HOM05D007736 ORTHO05D009783 4.2e-37 160.2 475 32.2
Phvul.006G209200 Phaseolus vulgaris HOM05D007736 ORTHO05D009783 9.0e-32 142.5 437 28.4
CsaV3_7G022310 Cucumis sativus L. HOM05D007736 ORTHO05D009783 1.2e-31 142.1 465 30.3
Nn1g06123 Nelumbo nucifera HOM05D007736 ORTHO05D009783 1.5e-31 141.7 543 26.3
CiPaw.05G040000 Carya illinoinensis HOM05D007736 ORTHO05D009783 3.8e-30 137.1 412 30.8
Lj5P244T47 Lonicera japonica HOM05D007736 ORTHO05D009783 3.8e-30 137.1 450 30.9
Dinv24237 Davidia involucrata HOM05D007736 ORTHO05D009783 2.5e-29 134.4 378 29.9
MELO3C028798.2 Cucumis melo HOM05D007736 ORTHO05D009783 1.6e-28 131.7 465 29.5
VMungo0540G1970 Vigna mungo HOM05D007736 ORTHO05D009783 1.6e-28 131.7 391 26.9
Ciclev10028677m.g Citrus clementina HOM05D007736 ORTHO05D009783 3.0e-27 127.5 257 31.1
Sed0025125 Sechium edule HOM05D007736 ORTHO05D009783 1.9e-26 124.8 459 27.0
ClCG09G014560 Citrullus lanatus HOM05D007736 ORTHO05D009783 2.5e-26 124.4 407 29.0
COL.COLO4_20877 Corchorus olitorius HOM05D007736 ORTHO05D009783 3.3e-26 124.0 244 34.4
Thecc.02G144400 Theobroma cacao HOM05D007736 ORTHO05D009783 3.3e-26 124.0 227 35.7
Eucgr.I02697 Eucalyptus grandis HOM05D007736 ORTHO05D009783 4.3e-26 123.6 342 29.5
QL11p018598 Quercus lobata HOM05D007736 ORTHO05D009783 7.4e-26 122.9 328 30.2
EL10Ac4g09677 Beta vulgaris HOM05D007736 ORTHO05D009783 2.2e-25 121.3 245 34.3
TWI14G1332 Tripterygium wilfordii HOM05D007736 ORTHO05D009783 2.2e-25 121.3 432 28.0
Hund21796 Selenicereus undatus HOM05D007736 ORTHO05D009783 2.8e-25 120.9 275 32.7
vmacro01801 Vaccinium macrocarpon HOM05D007736 ORTHO05D009783 1.8e-24 118.2 572 26.0
Cfa021836 Carpinus fangiana HOM05D007736 ORTHO05D009783 2.4e-24 117.9 233 34.8
Haze_10792 Corylus avellana HOM05D007736 ORTHO05D009783 2.4e-24 117.9 233 35.2
Manes.04G057900 Manihot esculenta HOM05D007736 ORTHO05D009783 2.4e-24 117.9 346 30.1
Cc02_g21990 Coffea canephora HOM05D007736 ORTHO05D009783 3.1e-24 117.5 235 34.0
Actinidia38961 Actinidia chinensis HOM05D007736 ORTHO05D009783 1.2e-23 115.5 472 28.2
Ah.06g188730 Amaranthus hybridus HOM05D007736 ORTHO05D009783 1.5e-23 115.2 255 32.2
Ca_00110_v3 Cicer arietinum L. HOM05D007736 ORTHO05D009783 2.6e-23 114.4 429 27.3
Solyc01g104790.4 Solanum lycopersicum HOM05D007736 ORTHO05D009783 3.4e-23 114.0 285 29.8
Rhsim11G0133400 Rhododendron simsii HOM05D007736 ORTHO05D009783 2.9e-22 110.9 275 29.5
Sopen01g047310 Solanum pennellii HOM05D007736 ORTHO05D009783 3.8e-22 110.5 290 30.7
AUR62006887 Chenopodium quinoa HOM05D007736 ORTHO05D009783 5.0e-22 110.2 241 32.4
PGSC0003DMG400029771 Solanum tuberosum HOM05D007736 ORTHO05D009783 5.0e-22 110.2 289 30.8
AUR62000538 Chenopodium quinoa HOM05D007736 ORTHO05D009783 1.1e-21 109.0 242 31.8
MSTRG.27826 Avicennia marina HOM05D007736 ORTHO05D009783 3.2e-21 107.5 320 30.0
Glyma.15G050700 Glycine max HOM05D007736 ORTHO05D009783 3.2e-21 107.5 411 26.3
TAR381G1413 Trochodendron aralioides HOM05D007736 ORTHO05D009783 4.2e-21 107.1 137 43.1
PGR142G3153 Punica granatum HOM05D007736 ORTHO05D009783 5.5e-21 106.7 348 25.3
ATR0772G143 Amborella trichopoda HOM05D007736 ORTHO05D009783 9.4e-21 105.9 752 23.8
Cpa.g.sc2.48 Carica papaya HOM05D007736 ORTHO05D009783 3.6e-20 104.0 406 27.6
Sc16g0009620 Simmondsia chinensis HOM05D007736 ORTHO05D009783 4.6e-20 103.6 418 27.0
Nitab4.5_0000249g0440 Nicotiana tabacum HOM05D007736 ORTHO05D009783 6.1e-20 103.2 307 28.7
CAN.G523.104 Capsicum annuum HOM05D007736 ORTHO05D009783 1.4e-19 102.1 270 29.3
HanXRQChr16g0514111 Helianthus annuus HOM05D007736 ORTHO05D009783 1.4e-19 102.1 252 32.5
Sed0013332 Sechium edule HOM05D007736 ORTHO05D009783 1.8e-19 101.7 419 25.5
Lsat_1_v5_gn_5_106541 Lactuca sativa HOM05D007736 ORTHO05D009783 5.1e-19 100.1 285 27.7
Psat1g218640 Pisum sativum HOM05D007736 ORTHO05D009783 8.8e-19 99.4 404 26.0
Lj6g0003665 Lotus japonicus HOM05D007736 ORTHO05D009783 1.1e-18 99.0 414 27.5
Migut.N01016 Erythranthe guttata HOM05D007736 ORTHO05D009783 1.5e-18 98.6 246 30.1
Medtr2g008130 Medicago truncatula HOM05D007736 ORTHO05D009783 5.7e-18 96.7 340 27.1
arahy.Tifrunner.gnm1.ann1.JZ71MD Arachis hypogaea HOM05D007736 ORTHO05D009783 7.4e-18 96.3 394 25.1
Potri.012G020400 Populus trichocarpa HOM05D007736 ORTHO05D009783 7.4e-18 96.3 400 28.5
Nitab4.5_0014357g0010 Nicotiana tabacum HOM05D007736 ORTHO05D009783 9.7e-18 95.9 292 27.4
Prupe.6G356600 Prunus persica HOM05D007736 ORTHO05D009783 1.3e-17 95.5 129 42.6
Actinidia00233 Actinidia chinensis HOM05D007736 ORTHO05D009783 2.2e-17 94.7 127 40.9
Glyma.08G181600 Glycine max HOM05D007736 ORTHO05D009783 2.8e-17 94.4 397 23.7
TAR381G0297 Trochodendron aralioides HOM05D007736 ORTHO05D009783 2.8e-17 94.4 283 30.7
Sabra12G0012700 Salix brachista HOM05D007736 ORTHO05D009783 4.8e-17 93.6 414 27.5
Atru.chr6.1122 Acer truncatum HOM05D007736 ORTHO05D009783 8.2e-17 92.8 371 26.4
arahy.Tifrunner.gnm1.ann1.40XV2D Arachis hypogaea HOM05D007736 ORTHO05D009783 1.1e-16 92.4 414 24.9
CDE02G1981 Ceratophyllum demersum HOM05D007736 ORTHO05D009783 1.8e-16 91.7 352 24.4
Potri.015G008200 Populus trichocarpa HOM05D007736 ORTHO05D009783 6.9e-16 89.7 366 27.0
SGA_v2.0_scaffold45G17286 Striga asiatica HOM05D007736 ORTHO05D009783 9.1e-16 89.4 259 29.0
unitig_26.g9583 Utricularia gibba HOM05D007736 ORTHO05D009783 2.0e-15 88.2 144 33.3
FAN09G0667 Fragaria x ananassa HOM05D007736 ORTHO05D009783 3.4e-15 87.4 120 37.5
MD04G1236600 Malus domestica HOM05D007736 ORTHO05D009783 4.5e-15 87.0 112 37.5
MD12G1255900 Malus domestica HOM05D007736 ORTHO05D009783 5.9e-15 86.7 112 37.5
FAN05G0165 Fragaria x ananassa HOM05D007736 ORTHO05D009783 7.7e-15 86.3 120 36.7
Prupe.7G056800 Prunus persica HOM05D007736 ORTHO05D009783 7.7e-15 86.3 109 39.4
FAN02G1431 Fragaria x ananassa HOM05D007736 ORTHO05D009783 1.0e-14 85.9 122 36.9
FAN05G0537 Fragaria x ananassa HOM05D007736 ORTHO05D009783 1.0e-14 85.9 120 36.7
FAN14G5928 Fragaria x ananassa HOM05D007736 ORTHO05D009783 1.0e-14 85.9 122 36.1
Sabra15G0006300 Salix brachista HOM05D007736 ORTHO05D009783 1.3e-14 85.5 358 24.9
FvH4_6g01062 Fragaria vesca HOM05D000868 ORTHO05D000711 5.0e-14 83.6 121 37.2
RcHm_v2.0_Chr3g0448601 Rosa chinensis HOM05D007736 ORTHO05D009783 5.0e-14 83.6 123 36.6
MSTRG.5252 Avicennia marina HOM05D007736 ORTHO05D009783 1.9e-13 81.6 245 28.2
HanXRQChr10g0289121 Helianthus annuus HOM05D007736 ORTHO05D009783 2.7e-12 77.8 265 30.2
ECA234G2384 Erigeron canadensis HOM05D007736 ORTHO05D009783 4.7e-12 77.0 283 29.7
TPR.G19753 Trifolium pratense HOM05D007736 ORTHO05D009783 6.1e-12 76.6 365 24.4
DCAR_021830 Daucus carota HOM05D007736 ORTHO05D009783 6.7e-11 73.2 431 23.4
Lalb_Chr20g0123201 Lupinus albus HOM05D007736 ORTHO05D009783 1.5e-10 72.0 347 24.2
Zm00001eb382360 Zea mays HOM05D007736 ORTHO05D009783 8.5e-06 56.2 378 24.6


User provided reference genes

Program Settings