Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02061 Aquilegia oxysepala HOM05D003212 ORTHO05D003959 1.9e-116 422.5 220 100.0
Aqoxy4G01641 Aquilegia oxysepala HOM05D003212 ORTHO05D003959 4.1e-26 122.5 71 83.1
Aqoxy2G00340 Aquilegia oxysepala HOM05D003212 ORTHO05D003959 5.6e-23 112.1 96 61.5
ATR0789G118 Amborella trichopoda HOM05D003212 ORTHO05D003959 8.9e-21 104.8 96 56.2
vmacro12692 Vaccinium macrocarpon HOM05D003212 ORTHO05D003959 8.9e-21 104.8 137 46.0
Actinidia21523 Actinidia chinensis HOM05D003212 ORTHO05D003959 2.0e-20 103.6 137 45.3
CSS0010475 Camellia sinensis var. sinensis HOM05D003212 ORTHO05D003959 3.4e-20 102.8 96 57.3
CSS0011806 Camellia sinensis var. sinensis HOM05D003212 ORTHO05D003959 3.4e-20 102.8 96 57.3
Cc02_g26670 Coffea canephora HOM05D003212 ORTHO05D003959 3.4e-20 102.8 96 56.2
Rhsim01G0123800 Rhododendron simsii HOM05D003212 ORTHO05D003959 3.4e-20 102.8 96 57.3
ClCG01G007740 Citrullus lanatus HOM05D003212 ORTHO05D003959 4.4e-20 102.4 96 56.2
MELO3C005122.2 Cucumis melo HOM05D003212 ORTHO05D003959 4.4e-20 102.4 96 56.2
HanXRQChr01g0008251 Helianthus annuus HOM05D003212 ORTHO05D003959 5.7e-20 102.1 137 45.3
Hma1.2p1_0384F.1_g141010 Hydrangea macrophylla HOM05D003212 ORTHO05D003959 5.7e-20 102.1 96 57.3
Solyc11g068830.2 Solanum lycopersicum HOM05D003212 ORTHO05D003959 5.7e-20 102.1 96 55.2
DCAR_006596 Daucus carota HOM05D003212 ORTHO05D003959 7.5e-20 101.7 95 56.8
CsaV3_5G024820 Cucumis sativus L. HOM05D003212 ORTHO05D003959 1.3e-19 100.9 96 55.2
PSO339G4798 Papaver somniferum HOM05D003212 ORTHO05D003959 1.7e-19 100.5 96 53.1
HanXRQChr13g0406671 Helianthus annuus HOM05D003212 ORTHO05D003959 2.2e-19 100.1 98 53.1
Sopen11g027550 Solanum pennellii HOM05D003212 ORTHO05D003959 2.2e-19 100.1 96 55.2
PGSC0003DMG400019620 Solanum tuberosum HOM05D003212 ORTHO05D003959 2.2e-19 100.1 96 55.2
PSO384G1532 Papaver somniferum HOM05D003212 ORTHO05D003959 2.9e-19 99.8 96 54.2
Sed0011268 Sechium edule HOM05D003212 ORTHO05D003959 2.9e-19 99.8 96 53.1
GSVIVG01000650001 Vitis vinifera HOM05D003212 ORTHO05D003959 2.9e-19 99.8 96 55.2
MSTRG.20521 Avicennia marina HOM05D003212 ORTHO05D003959 3.7e-19 99.4 139 43.2
GSVIVG01000654001 Vitis vinifera HOM05D003212 ORTHO05D003959 3.7e-19 99.4 96 54.2
ECA248G3712 Erigeron canadensis HOM05D003212 ORTHO05D003959 4.9e-19 99.0 139 44.6
arahy.Tifrunner.gnm1.ann1.28N5NC Arachis hypogaea HOM05D003212 ORTHO05D003959 6.4e-19 98.6 96 55.2
arahy.Tifrunner.gnm1.ann1.J24RTT Arachis hypogaea HOM05D003212 ORTHO05D003959 6.4e-19 98.6 96 55.2
Hund15723 Selenicereus undatus HOM05D003212 ORTHO05D003959 6.4e-19 98.6 96 55.2
AUR62003806 Chenopodium quinoa HOM05D003212 ORTHO05D003959 8.3e-19 98.2 96 56.2
Lj7A581T52 Lonicera japonica HOM05D003212 ORTHO05D003959 8.3e-19 98.2 95 55.8
SalBow5G4847 Salvia bowleyana HOM05D003212 ORTHO05D003959 8.3e-19 98.2 96 55.2
THA.LOC104824191 Tarenaya hassleriana HOM05D003212 ORTHO05D003959 8.3e-19 98.2 96 56.2
Dinv32034 Davidia involucrata HOM05D003212 ORTHO05D003959 1.1e-18 97.8 96 54.2
Cpa.g.sc223.10 Carica papaya HOM05D003212 ORTHO05D003959 1.4e-18 97.4 96 55.2
COL.COLO4_09453 Corchorus olitorius HOM05D003212 ORTHO05D003959 1.4e-18 97.4 96 54.2
Nn7g36634 Nelumbo nucifera HOM05D003212 ORTHO05D003959 1.4e-18 97.4 137 43.1
Sed0013182 Sechium edule HOM05D003212 ORTHO05D003959 1.4e-18 97.4 96 53.1
CAN.G745.39 Capsicum annuum HOM05D003212 ORTHO05D003959 1.8e-18 97.1 96 54.2
Sc11g0006540 Simmondsia chinensis HOM05D003212 ORTHO05D003959 2.4e-18 96.7 96 53.1
Atru.chr12.1389 Acer truncatum HOM05D003212 ORTHO05D003959 3.2e-18 96.3 96 55.2
A04p05360 Brassica napus HOM05D003212 ORTHO05D003959 3.2e-18 96.3 137 41.6
BolC4t25379H Brassica oleracea HOM05D003212 ORTHO05D003959 3.2e-18 96.3 137 41.6
BraA04t16236Z Brassica rapa HOM05D003212 ORTHO05D003959 3.2e-18 96.3 137 41.6
Haze_03071 Corylus avellana HOM05D003212 ORTHO05D003959 3.2e-18 96.3 96 54.2
Gohir.A04G028000 Gossypium hirsutum HOM05D003212 ORTHO05D003959 3.2e-18 96.3 96 55.2
Gorai.013G167000 Gossypium raimondii HOM05D003212 ORTHO05D003959 3.2e-18 96.3 96 55.2
Lsat_1_v5_gn_5_157360 Lactuca sativa HOM05D003212 ORTHO05D003959 3.2e-18 96.3 96 54.2
Os01g0951200 Oryza sativa ssp. japonica HOM05D003212 ORTHO05D003959 3.2e-18 96.3 96 53.1
Gohir.D13G149300 Gossypium hirsutum HOM05D003212 ORTHO05D003959 4.1e-18 95.9 96 55.2
PGR031G0586 Punica granatum HOM05D003212 ORTHO05D003959 4.1e-18 95.9 96 55.2
unitig_26.g9606 Utricularia gibba HOM05D003212 ORTHO05D003959 4.1e-18 95.9 139 43.2
Zm00001eb140930 Zea mays HOM05D003212 ORTHO05D003959 4.1e-18 95.9 96 51.0
Ciclev10001014m.g Citrus clementina HOM05D003212 ORTHO05D003959 5.4e-18 95.5 96 54.2
Ciclev10004916m.g Citrus clementina HOM05D003212 ORTHO05D003959 5.4e-18 95.5 96 54.2
Duzib213G0398 Durio zibethinus HOM05D003212 ORTHO05D003959 5.4e-18 95.5 96 55.2
Duzib268G1229 Durio zibethinus HOM05D003212 ORTHO05D003959 5.4e-18 95.5 96 55.2
Lalb_Chr03g0032831 Lupinus albus HOM05D003212 ORTHO05D003959 5.4e-18 95.5 96 54.2
Peaxi162Scf01010g00217 Petunia axillaris HOM05D003212 ORTHO05D003959 5.4e-18 95.5 96 53.1
Thecc.07G075400 Theobroma cacao HOM05D003212 ORTHO05D003959 5.4e-18 95.5 96 55.2
TAR369G1042 Trochodendron aralioides HOM05D003212 ORTHO05D003959 5.4e-18 95.5 96 54.2
Atru.chr12.1386 Acer truncatum HOM05D003212 ORTHO05D003959 7.0e-18 95.1 96 54.2
EL10Ac2g02822 Beta vulgaris HOM05D003212 ORTHO05D003959 7.0e-18 95.1 96 54.2
AUR62026849 Chenopodium quinoa HOM05D003212 ORTHO05D003959 7.0e-18 95.1 96 53.1
AUR62037200 Chenopodium quinoa HOM05D003212 ORTHO05D003959 7.0e-18 95.1 96 53.1
Gohir.A13G144600 Gossypium hirsutum HOM05D003212 ORTHO05D003959 7.0e-18 95.1 96 54.2
Lj3g0002083 Lotus japonicus HOM05D003212 ORTHO05D003959 7.0e-18 95.1 96 54.2
Sabra01G0019400 Salix brachista HOM05D003212 ORTHO05D003959 7.0e-18 95.1 96 54.2
SGA_v2.0_scaffold232G43508 Striga asiatica HOM05D003212 ORTHO05D003959 7.0e-18 95.1 139 41.7
CAN.G919.25 Capsicum annuum HOM05D003212 ORTHO05D003959 9.2e-18 94.7 95 54.7
Gorai.009G432600 Gossypium raimondii HOM05D003212 ORTHO05D003959 9.2e-18 94.7 96 54.2
Manes.11G004200 Manihot esculenta HOM05D003212 ORTHO05D003959 9.2e-18 94.7 96 55.2
SGA_v2.0_scaffold124G33627 Striga asiatica HOM05D003212 ORTHO05D003959 9.2e-18 94.7 96 52.1
A07p22130 Brassica napus HOM05D003212 ORTHO05D003959 1.2e-17 94.4 96 50.0
BraA07t29896Z Brassica rapa HOM05D003212 ORTHO05D003959 1.2e-17 94.4 96 50.0
AUR62001997 Chenopodium quinoa HOM05D003212 ORTHO05D003959 1.2e-17 94.4 96 54.2
Psat0s1718g0040 Pisum sativum HOM05D003212 ORTHO05D003959 1.2e-17 94.4 96 53.1
HPP92_003235 Vanilla planifolia HOM05D003212 ORTHO05D003959 1.2e-17 94.4 96 52.1
Ah.12g062950 Amaranthus hybridus HOM05D003212 ORTHO05D003959 1.6e-17 94.0 137 40.9
CARHR164370 Cardamine hirsuta HOM05D003212 ORTHO05D003959 1.6e-17 94.0 96 50.0
CiPaw.14G006800 Carya illinoinensis HOM05D003212 ORTHO05D003959 1.6e-17 94.0 96 54.2
Ca_10473_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 1.6e-17 94.0 96 54.2
Migut.B01220 Erythranthe guttata HOM05D003212 ORTHO05D003959 1.6e-17 94.0 96 52.1
Lj3g0024329 Lotus japonicus HOM05D003212 ORTHO05D003959 1.6e-17 94.0 96 54.2
Oeu003925.2 Olea europaea HOM05D003212 ORTHO05D003959 1.6e-17 94.0 96 52.1
Potri.001G026300 Populus trichocarpa HOM05D003212 ORTHO05D003959 1.6e-17 94.0 96 53.1
Potri.003G198501 Populus trichocarpa HOM05D003212 ORTHO05D003959 1.6e-17 94.0 96 54.2
Potri.T125906 Populus trichocarpa HOM05D003212 ORTHO05D003959 1.6e-17 94.0 96 54.2
VMungo1080G0024 Vigna mungo HOM05D003212 ORTHO05D003959 1.6e-17 94.0 96 54.2
AL5G35520 Arabidopsis lyrata HOM05D003212 ORTHO05D003959 2.0e-17 93.6 96 51.0
BcaC08g44683 Brassica carinata HOM05D003212 ORTHO05D003959 2.0e-17 93.6 137 40.1
C06p22180 Brassica napus HOM05D003212 ORTHO05D003959 2.0e-17 93.6 137 40.1
BolC6t37404H Brassica oleracea HOM05D003212 ORTHO05D003959 2.0e-17 93.6 137 40.1
FvH4_7g02810 Fragaria vesca HOM05D003212 ORTHO05D003959 2.0e-17 93.6 96 54.2
FAN01G2682 Fragaria x ananassa HOM05D003212 ORTHO05D003959 2.0e-17 93.6 96 54.2
FAN03G0414 Fragaria x ananassa HOM05D003212 ORTHO05D003959 2.0e-17 93.6 96 54.2
FAN06G3951 Fragaria x ananassa HOM05D003212 ORTHO05D003959 2.0e-17 93.6 96 54.2
RcHm_v2.0_Chr1g0323241 Rosa chinensis HOM05D003212 ORTHO05D003959 2.0e-17 93.6 96 54.2
VMungo1127G0513 Vigna mungo HOM05D003212 ORTHO05D003959 2.0e-17 93.6 98 53.1
BcaC02g09067 Brassica carinata HOM05D003212 ORTHO05D003959 2.7e-17 93.2 137 40.9
C04p38050 Brassica napus HOM05D003212 ORTHO05D003959 2.7e-17 93.2 137 40.9
Carub.0005s2109 Capsella rubella HOM05D003212 ORTHO05D003959 2.7e-17 93.2 96 50.0
FAN10G3499 Fragaria x ananassa HOM05D003212 ORTHO05D003959 2.7e-17 93.2 96 53.1
Hund13345 Selenicereus undatus HOM05D003212 ORTHO05D003959 2.7e-17 93.2 97 50.5
TWI38G0920 Tripterygium wilfordii HOM05D003212 ORTHO05D003959 2.7e-17 93.2 96 54.2
Zm00001eb140940 Zea mays HOM05D003212 ORTHO05D003959 2.7e-17 93.2 96 51.0
AT3G54470 Arabidopsis thaliana HOM05D003212 ORTHO05D003959 3.5e-17 92.8 96 49.0
BcaB02g07736 Brassica carinata HOM05D003212 ORTHO05D003959 3.5e-17 92.8 96 50.0
Glyma.13G198700 Glycine max HOM05D003212 ORTHO05D003959 3.5e-17 92.8 96 51.0
Nitab4.5_0000893g0050 Nicotiana tabacum HOM05D003212 ORTHO05D003959 3.5e-17 92.8 96 53.1
Oeu056551.1 Olea europaea HOM05D003212 ORTHO05D003959 3.5e-17 92.8 96 53.1
CANSAT80G2392 Cannabis sativa HOM05D003212 ORTHO05D003959 4.6e-17 92.4 96 53.1
Prupe.2G032600 Prunus persica HOM05D003212 ORTHO05D003959 4.6e-17 92.4 96 54.2
MSTRG.16992 Avicennia marina HOM05D003212 ORTHO05D003959 5.9e-17 92.0 96 52.1
CDE08G1532 Ceratophyllum demersum HOM05D003212 ORTHO05D003959 5.9e-17 92.0 137 41.6
Glyma.11G154200 Glycine max HOM05D003212 ORTHO05D003959 5.9e-17 92.0 96 53.1
Lalb_Chr04g0264051 Lupinus albus HOM05D003212 ORTHO05D003959 5.9e-17 92.0 96 53.1
Lalb_Chr14g0366121 Lupinus albus HOM05D003212 ORTHO05D003959 5.9e-17 92.0 96 53.1
Os01g0951400 Oryza sativa ssp. japonica HOM05D003212 ORTHO05D003959 5.9e-17 92.0 96 51.0
Peaxi162Scf00010g03311 Petunia axillaris HOM05D003212 ORTHO05D003959 5.9e-17 92.0 96 52.1
Phvul.011G207800 Phaseolus vulgaris HOM05D003212 ORTHO05D003959 5.9e-17 92.0 96 51.0
QL04p014524 Quercus lobata HOM05D003212 ORTHO05D003959 5.9e-17 92.0 96 53.1
Sp5g07950 Schrenkiella parvula HOM05D003212 ORTHO05D003959 5.9e-17 92.0 96 49.0
arahy.Tifrunner.gnm1.ann1.HRMJ8R Arachis hypogaea HOM05D003212 ORTHO05D003959 7.8e-17 91.7 96 52.1
arahy.Tifrunner.gnm1.ann1.HVGJ4H Arachis hypogaea HOM05D003212 ORTHO05D003959 7.8e-17 91.7 96 52.1
Thhalv10010334m.g Eutrema salsugineum HOM05D003212 ORTHO05D003959 7.8e-17 91.7 98 51.0
Medtr1g025060 Medicago truncatula HOM05D003212 ORTHO05D003959 7.8e-17 91.7 96 53.1
Medtr3g017580 Medicago truncatula HOM05D003212 ORTHO05D003959 7.8e-17 91.7 96 53.1
Nitab4.5_0001135g0170 Nicotiana tabacum HOM05D003212 ORTHO05D003959 7.8e-17 91.7 96 52.1
QL04p014894 Quercus lobata HOM05D003212 ORTHO05D003959 7.8e-17 91.7 96 52.1
Eucgr.G03242 Eucalyptus grandis HOM05D003212 ORTHO05D003959 1.0e-16 91.3 95 53.7
Oeu002655.1 Olea europaea HOM05D003212 ORTHO05D003959 1.0e-16 91.3 96 51.0
Psat5g219440 Pisum sativum HOM05D003212 ORTHO05D003959 1.0e-16 91.3 96 53.1
Aa31LG1G5360 Aethionema arabicum HOM05D003212 ORTHO05D003959 1.3e-16 90.9 137 40.1
Gohir.D05G360100 Gossypium hirsutum HOM05D003212 ORTHO05D003959 1.3e-16 90.9 96 53.1
MD09G1262400 Malus domestica HOM05D003212 ORTHO05D003959 1.7e-16 90.5 96 52.1
VMungo1215G0810 Vigna mungo HOM05D003212 ORTHO05D003959 1.7e-16 90.5 98 52.0
Ca_18881_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 3.0e-16 89.7 96 52.1
Medtr8g038390 Medicago truncatula HOM05D003212 ORTHO05D003959 3.0e-16 89.7 96 51.0
Phvul.005G029300 Phaseolus vulgaris HOM05D003212 ORTHO05D003959 3.9e-16 89.4 96 52.1
Migut.N01834 Erythranthe guttata HOM05D003212 ORTHO05D003959 6.6e-16 88.6 95 49.5
TPR.G36892 Trifolium pratense HOM05D003212 ORTHO05D003959 6.6e-16 88.6 96 51.0
Migut.O00503 Erythranthe guttata HOM05D003212 ORTHO05D003959 8.6e-16 88.2 96 49.0
Mapoly0052s0107 Marchantia polymorpha HOM05D003212 ORTHO05D003959 1.1e-15 87.8 137 38.7
Ca_23514_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 1.9e-15 87.0 96 50.0
SEGI_29745 Sequoiadendron giganteum HOM05D003212 ORTHO05D003959 1.9e-15 87.0 100 49.0
MD17G1257300 Malus domestica HOM05D003212 ORTHO05D003959 2.5e-15 86.7 96 51.0
Pp3c3_16990 Physcomitrium patens HOM05D003212 ORTHO05D003959 4.3e-15 85.9 139 38.1
Ca_02713_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 7.3e-15 85.1 96 50.0
AagrBONN_evm.TU.Sc2ySwM_117.3888 Anthoceros agrestis HOM05D003212 ORTHO05D003959 1.6e-14 84.0 100 46.0
Pp3c13_16830 Physcomitrium patens HOM05D003212 ORTHO05D003959 2.8e-14 83.2 139 38.1
ECA232G0145 Erigeron canadensis HOM05D003212 ORTHO05D003959 1.0e-13 81.3 128 43.0
Aqoxy61s001 Aquilegia oxysepala HOM05D000918 ORTHO05D000109 3.1e-13 79.7 68 61.8
Sabra03G0147800 Salix brachista HOM05D003212 ORTHO05D003959 3.1e-13 79.7 167 35.3
SMO259G0031 Selaginella moellendorffii HOM05D003212 ORTHO05D003959 4.0e-13 79.3 95 41.1
TPR.G17794 Trifolium pratense HOM05D003212 ORTHO05D003959 4.4e-12 75.9 48 79.2
Cre01.g048950 Chlamydomonas reinhardtii HOM05D003212 ORTHO05D003959 9.8e-12 74.7 98 39.8
PRCOL_00000883 Prasinoderma coloniale HOM05D003212 ORTHO05D003959 6.4e-11 72.0 136 33.8
CBR_g41363 Chara braunii HOM05D003212 ORTHO05D003959 1.9e-10 70.5 97 40.2
HPP92_003231 Vanilla planifolia HOM05D003212 ORTHO05D003959 1.9e-10 70.5 48 72.9
Aqoxy90s003 Aquilegia oxysepala HOM05D003212 ORTHO05D077977 9.2e-10 68.2 40 85.0
CDE09G0923 Ceratophyllum demersum HOM05D003212 ORTHO05D003959 2.3e-08 63.5 137 34.3
SalBow5G1921 Salvia bowleyana HOM05D003212 ORTHO05D003959 1.5e-07 60.8 75 49.3
SalBow5G3827 Salvia bowleyana HOM05D003212 ORTHO05D003959 5.6e-07 58.9 74 48.6
MCO07G762 Micromonas commoda HOM05D003212 ORTHO05D003959 9.5e-07 58.2 94 36.2


User provided reference genes

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