Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 3.7e-123 444.9 223 100.0
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 9.1e-90 334.0 205 75.6
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 2.2e-88 329.3 219 72.1
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 3.0e-85 318.9 206 72.8
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 2.8e-83 312.4 205 73.2
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 3.7e-83 312.0 211 69.2
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 8.3e-83 310.8 221 69.2
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 4.1e-82 308.5 205 71.7
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 7.0e-82 307.8 205 71.7
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 9.1e-82 307.4 205 70.2
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 9.1e-82 307.4 206 69.4
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 2.7e-81 305.8 211 70.6
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 2.7e-81 305.8 204 70.6
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 3.5e-81 305.4 215 68.4
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 7.7e-81 304.3 205 69.3
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 5.0e-80 301.6 205 67.8
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 2.5e-79 299.3 221 65.2
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 2.5e-79 299.3 207 70.0
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 2.5e-79 299.3 205 67.8
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 3.2e-79 298.9 210 68.6
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 4.2e-79 298.5 205 67.8
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 5.5e-79 298.1 225 64.9
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 9.4e-79 297.4 205 69.3
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 2.7e-78 295.8 205 66.3
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 3.6e-78 295.4 211 67.3
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 4.7e-78 295.0 205 70.7
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 1.8e-77 293.1 205 67.3
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 1.8e-77 293.1 205 66.8
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 4.0e-77 292.0 205 65.9
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 6.8e-77 291.2 205 67.8
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 9.8e-76 287.3 205 67.3
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 8.3e-75 284.3 203 67.5
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 1.1e-74 283.9 210 63.3
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 1.4e-74 283.5 205 65.4
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.8e-74 283.1 205 64.9
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 1.8e-74 283.1 221 62.9
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 2.4e-74 282.7 205 65.4
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 2.4e-74 282.7 205 62.4
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 3.1e-74 282.3 203 66.0
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 5.4e-74 281.6 211 63.5
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 5.4e-74 281.6 206 63.1
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 9.2e-74 280.8 212 64.6
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 9.2e-74 280.8 205 64.9
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 2.0e-73 279.6 205 64.4
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 7.7e-73 277.7 207 63.8
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 3.8e-72 275.4 205 63.4
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 8.6e-72 274.2 211 61.6
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 8.6e-72 274.2 208 61.5
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 1.1e-71 273.9 205 62.4
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 1.1e-71 273.9 200 65.0
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 1.1e-71 273.9 205 64.9
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 3.3e-71 272.3 212 62.3
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 4.3e-71 271.9 211 61.1
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 6.1e-70 268.1 211 60.2
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 6.1e-70 268.1 211 60.2
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 1.4e-69 266.9 212 60.4
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 2.3e-69 266.2 211 59.2
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 6.8e-69 264.6 204 62.3
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 6.8e-69 264.6 205 60.5
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 8.9e-69 264.2 211 60.2
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 2.0e-68 263.1 211 59.7
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 2.6e-68 262.7 211 59.2
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 3.4e-68 262.3 207 59.9
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 4.4e-68 261.9 206 59.7
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 5.7e-68 261.5 211 59.2
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 6.4e-67 258.1 200 63.0
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 1.1e-66 257.3 203 60.6
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 1.4e-66 256.9 204 60.8
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 1.8e-66 256.5 203 60.1
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 3.2e-66 255.8 205 59.0
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 4.1e-66 255.4 186 67.2
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 7.0e-66 254.6 203 60.1
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 8.6e-64 247.7 205 56.1
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 2.5e-63 246.1 205 59.5
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 5.6e-63 245.0 194 59.8
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 1.2e-62 243.8 240 53.8
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 3.1e-61 239.2 209 52.2
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 4.9e-59 231.9 207 57.5
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 7.8e-57 224.6 207 57.5
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 8.6e-56 221.1 207 55.6
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 2.1e-54 216.5 158 65.2
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.1e-53 214.2 153 64.7
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 1.4e-53 213.8 152 67.8
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 2.0e-52 209.9 236 47.9
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 9.8e-52 207.6 192 57.3
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 2.9e-51 206.1 179 56.4
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 6.4e-51 204.9 221 48.0
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 7.1e-50 201.4 211 50.7
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 2.7e-49 199.5 126 73.8
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 1.3e-48 197.2 211 43.6
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 3.9e-48 195.7 122 73.8
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 9.9e-44 181.0 126 66.7
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 2.9e-43 179.5 165 57.6
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 6.4e-43 178.3 200 49.0
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 3.5e-41 172.6 126 69.8
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 1.5e-36 157.1 96 76.0
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 3.2e-34 149.4 213 39.9
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 1.0e-32 144.4 91 74.7
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 1.1e-26 124.4 162 36.4
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 2.4e-26 123.2 79 70.9
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 3.0e-24 116.3 89 62.9
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 2.5e-23 113.2 89 61.8
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 4.2e-18 95.9 250 27.6
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 7.9e-17 91.7 162 38.9
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 7.9e-17 91.7 162 38.9
FAN24G0543 Fragaria x ananassa HOM05D006784 ORTHO05D008508 7.4e-15 85.1 156 37.2
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 2.1e-14 83.6 86 50.0
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 5.8e-12 75.5 152 34.9
MCO03G046 Micromonas commoda HOM05D006784 ORTHO05D008508 8.4e-11 71.6 228 27.2
FvH4_2g01030 Fragaria vesca HOM05D006784 ORTHO05D005195 4.2e-10 69.3 138 33.3
Gorai.004G102800 Gossypium raimondii HOM05D006784 ORTHO05D008508 5.5e-10 68.9 42 78.6
MBI14_g30460_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D014525 5.7e-07 58.9 37 75.7


User provided reference genes

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