Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01848 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 0.0e+00 1380.5 701 100.0
Aqoxy2G03825 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 0.0e+00 1337.8 704 97.0
TAR633G1807 Trochodendron aralioides HOM05D006558 ORTHO05D008424 3.7e-246 855.1 713 62.4
MBI13_g29518_MAGBIO Magnolia biondii HOM05D006558 ORTHO05D008424 6.3e-230 801.2 710 58.2
Nn7g37154 Nelumbo nucifera HOM05D006558 ORTHO05D008424 2.2e-222 776.2 715 57.8
QL04p014186 Quercus lobata HOM05D006558 ORTHO05D008424 3.5e-220 768.8 706 55.8
Actinidia06260 Actinidia chinensis HOM05D006558 ORTHO05D008424 8.0e-217 757.7 707 57.0
Prupe.2G031500 Prunus persica HOM05D006558 ORTHO05D008424 1.3e-214 750.4 708 54.8
Gohir.D06G185500 Gossypium hirsutum HOM05D006558 ORTHO05D008424 8.3e-214 747.7 707 55.3
CiPaw.13G011700 Carya illinoinensis HOM05D006558 ORTHO05D008424 1.1e-213 747.3 705 55.9
RcHm_v2.0_Chr1g0321321 Rosa chinensis HOM05D006558 ORTHO05D008424 4.1e-213 745.3 716 54.5
Gorai.010G217100 Gossypium raimondii HOM05D006558 ORTHO05D008424 2.0e-212 743.0 707 55.2
TWI15G0624 Tripterygium wilfordii HOM05D006558 ORTHO05D008424 2.7e-212 742.7 708 53.8
GSVIVG01000827001 Vitis vinifera HOM05D006558 ORTHO05D008424 5.0e-211 738.4 708 54.1
Manes.12G022900 Manihot esculenta HOM05D006558 ORTHO05D008424 4.3e-210 735.3 710 54.4
Ciclev10033512m.g Citrus clementina HOM05D006558 ORTHO05D008424 9.5e-210 734.2 706 54.1
FvH4_7g02620 Fragaria vesca HOM05D006558 ORTHO05D008424 6.8e-208 728.0 709 53.3
Rhsim07G0065000 Rhododendron simsii HOM05D006558 ORTHO05D008424 9.8e-207 724.2 758 52.2
FAN01G2130 Fragaria x ananassa HOM05D006558 ORTHO05D008424 1.6e-204 716.8 724 52.2
Duzib106G1800 Durio zibethinus HOM05D006558 ORTHO05D008424 3.0e-203 712.6 687 53.1
FAN03G0498 Fragaria x ananassa HOM05D006558 ORTHO05D008424 2.5e-202 709.5 724 51.8
Potri.004G236000 Populus trichocarpa HOM05D006558 ORTHO05D008424 4.7e-201 705.3 707 53.6
PSO675G8563 Papaver somniferum HOM05D006558 ORTHO05D008424 4.1e-197 692.2 708 53.4
Ca_25408_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 1.2e-196 690.6 707 51.5
Sc11g0006630 Simmondsia chinensis HOM05D006558 ORTHO05D008424 1.2e-196 690.6 707 51.1
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 2.7e-196 689.5 700 51.3
Psat5g217480 Pisum sativum HOM05D006558 ORTHO05D008424 3.5e-196 689.1 706 51.1
Phvul.002G285400 Phaseolus vulgaris HOM05D006558 ORTHO05D008424 1.0e-195 687.6 711 50.6
Lj3g0026268 Lotus japonicus HOM05D006558 ORTHO05D008424 3.9e-195 685.6 714 50.4
SGA_v2.0_scaffold232G43518 Striga asiatica HOM05D006558 ORTHO05D008424 8.6e-195 684.5 709 49.8
Oeu006113.1 Olea europaea HOM05D006558 ORTHO05D008424 1.9e-194 683.3 703 51.9
VMungo0251G1905 Vigna mungo HOM05D006558 ORTHO05D008424 2.5e-194 682.9 707 50.9
CANSAT78G0292 Cannabis sativa HOM05D006558 ORTHO05D008424 5.6e-194 681.8 703 50.6
Lalb_Chr25g0282291 Lupinus albus HOM05D006558 ORTHO05D008424 4.7e-193 678.7 707 50.2
AT3G07530 Arabidopsis thaliana HOM05D006558 ORTHO05D008424 8.1e-193 677.9 709 49.4
AL3G18860 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 1.8e-192 676.8 713 49.2
CANSAT78G2064 Cannabis sativa HOM05D006558 ORTHO05D008424 2.4e-192 676.4 703 50.4
THA.LOC104826716 Tarenaya hassleriana HOM05D006558 ORTHO05D008424 3.4e-191 672.5 716 50.7
HanXRQChr02g0050141 Helianthus annuus HOM05D006558 ORTHO05D008424 4.4e-191 672.2 707 49.6
Glyma.11G153500 Glycine max HOM05D006558 ORTHO05D008424 6.4e-190 668.3 710 50.1
Lj9C648T3 Lonicera japonica HOM05D006558 ORTHO05D008424 1.4e-189 667.2 674 53.0
Peaxi162Scf00516g00328 Petunia axillaris HOM05D006558 ORTHO05D008424 2.4e-189 666.4 704 50.1
Sopen03g028230 Solanum pennellii HOM05D006558 ORTHO05D008424 2.7e-188 662.9 699 50.1
EL10Ac2g02834 Beta vulgaris HOM05D006558 ORTHO05D009340 3.5e-188 662.5 702 50.0
AUR62037214 Chenopodium quinoa HOM05D006558 ORTHO05D008424 3.5e-188 662.5 705 50.6
ECA248G1764 Erigeron canadensis HOM05D006558 ORTHO05D008424 4.6e-188 662.1 705 49.4
Cc07_g20890 Coffea canephora HOM05D006558 ORTHO05D008424 1.3e-187 660.6 709 48.8
Sp3g06440 Schrenkiella parvula HOM05D006558 ORTHO05D008424 1.7e-187 660.2 711 48.5
Solyc03g097460.3 Solanum lycopersicum HOM05D006558 ORTHO05D008424 3.0e-187 659.4 697 50.1
PGR031G1286 Punica granatum HOM05D006558 ORTHO05D008424 4.3e-186 655.6 709 47.7
AUR62026839 Chenopodium quinoa HOM05D006558 ORTHO05D008424 5.6e-186 655.2 701 50.1
Thhalv10020176m.g Eutrema salsugineum HOM05D006558 ORTHO05D008424 9.0e-184 647.9 709 47.5
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 5.8e-183 645.2 708 48.0
Sed0005595 Sechium edule HOM05D006558 ORTHO05D008424 8.4e-182 641.3 710 49.7
Aa31LG10G8390 Aethionema arabicum HOM05D006558 ORTHO05D008424 9.3e-181 637.9 709 47.0
HPP92_012099 Vanilla planifolia HOM05D006558 ORTHO05D008424 2.1e-180 636.7 709 49.6
Ca_25460_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 1.3e-179 634.0 667 51.0
Carub.0003s0708 Capsella rubella HOM05D006558 ORTHO05D008424 1.7e-179 633.6 712 47.1
CsaV3_5G011280 Cucumis sativus L. HOM05D006558 ORTHO05D008424 1.7e-179 633.6 707 48.9
BraA05t22799Z Brassica rapa HOM05D006558 ORTHO05D008424 6.6e-179 631.7 722 46.8
Nitab4.5_0002530g0080 Nicotiana tabacum HOM05D006558 ORTHO05D008424 1.1e-178 630.9 708 49.6
Haze_03062 Corylus avellana HOM05D006558 ORTHO05D008424 2.8e-177 626.3 609 53.2
MELO3C016629.2 Cucumis melo HOM05D006558 ORTHO05D008424 6.2e-177 625.2 706 48.6
A05p40680 Brassica napus HOM05D006558 ORTHO05D008424 2.6e-175 619.8 692 47.8
BolC5t34633H Brassica oleracea HOM05D006558 ORTHO05D008424 2.9e-174 616.3 722 45.7
BcaC05g29545 Brassica carinata HOM05D006558 ORTHO05D008424 1.4e-173 614.0 710 46.1
CAN.G732.14 Capsicum annuum HOM05D006558 ORTHO05D008424 4.2e-173 612.5 700 47.3
Dinv00935 Davidia involucrata HOM05D006558 ORTHO05D008424 6.0e-172 608.6 594 56.2
C05p59790 Brassica napus HOM05D006558 ORTHO05D008424 1.3e-171 607.4 692 47.1
Lsat_1_v5_gn_1_114420 Lactuca sativa HOM05D006558 ORTHO05D008424 6.9e-168 595.1 699 47.1
DCAR_010372 Daucus carota HOM05D006558 ORTHO05D008424 2.0e-167 593.6 519 58.0
Nitab4.5_0000021g1060 Nicotiana tabacum HOM05D006558 ORTHO05D008424 5.8e-167 592.0 743 45.5
Psat5g217880 Pisum sativum HOM05D006558 ORTHO05D008424 6.5e-166 588.6 518 56.9
arahy.Tifrunner.gnm1.ann1.898F3G Arachis hypogaea HOM05D006558 ORTHO05D008424 4.3e-162 575.9 696 46.6
Ah.10g030940 Amaranthus hybridus HOM05D006558 ORTHO05D008424 6.2e-161 572.0 613 49.3
CARHR082190 Cardamine hirsuta HOM05D006558 ORTHO05D008424 3.7e-153 546.2 521 53.0
Atru.chr11.2434 Acer truncatum HOM05D006558 ORTHO05D008424 5.3e-152 542.3 465 57.6
Dinv09252 Davidia involucrata HOM05D006558 ORTHO05D008424 2.9e-150 536.6 539 54.9
Migut.K00935 Erythranthe guttata HOM05D006558 ORTHO05D008424 8.5e-150 535.0 600 50.2
Thecc.10G170400 Theobroma cacao HOM05D006558 ORTHO05D008424 2.3e-139 500.4 449 56.6
Cpa.g.sc96.50 Carica papaya HOM05D006558 ORTHO05D008424 2.6e-138 496.9 465 55.7
ATR1093G023 Amborella trichopoda HOM05D006558 ORTHO05D008424 1.3e-134 484.6 550 46.9
unitig_32.g11142 Utricularia gibba HOM05D006558 ORTHO05D008424 1.7e-134 484.2 651 44.9
MD00G1214500 Malus domestica HOM05D006558 ORTHO05D008424 5.0e-134 482.6 405 58.5
Sabra01G0180400 Salix brachista HOM05D006558 ORTHO05D008424 6.1e-132 475.7 447 56.6
vmacro13739 Vaccinium macrocarpon HOM05D006558 ORTHO05D008424 3.1e-128 463.4 475 51.4
CDE05G1491 Ceratophyllum demersum HOM05D006558 ORTHO05D008424 1.9e-125 454.1 672 41.5
Hund15718 Selenicereus undatus HOM05D006558 ORTHO05D008424 3.6e-124 449.9 644 41.8
arahy.Tifrunner.gnm1.ann1.S73JQ5 Arachis hypogaea HOM05D006558 ORTHO05D008424 4.7e-124 449.5 559 45.4
PGSC0003DMG400031735 Solanum tuberosum HOM05D006558 ORTHO05D008424 8.5e-118 428.7 493 48.1
Medtr3g019010 Medicago truncatula HOM05D006558 ORTHO05D008424 4.0e-115 419.9 539 44.0
Zm00001eb143980 Zea mays HOM05D006558 ORTHO05D008424 3.7e-113 413.3 495 45.9
Gohir.A06G175900 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.1e-112 411.8 437 51.5
Mapoly0001s0524 Marchantia polymorpha HOM05D006558 ORTHO05D008424 4.1e-104 383.3 839 32.3
AL908U10010 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 1.0e-94 352.1 383 48.6
SMO144G0043 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 4.3e-93 346.7 703 34.6
SMO229G0006 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 5.6e-93 346.3 703 34.6
Pp3c9_4730 Physcomitrium patens HOM05D006558 ORTHO05D008424 5.8e-90 336.3 733 31.5
AagrBONN_evm.TU.Sc2ySwM_228.965 Anthoceros agrestis HOM05D006558 ORTHO05D008424 2.4e-88 330.9 773 30.3
SEGI_06522 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 1.6e-76 291.6 415 39.8
Gohir.A06G175902 Gossypium hirsutum HOM05D006558 ORTHO05D008424 5.2e-75 286.6 237 60.3
Eucgr.H05132 Eucalyptus grandis HOM05D006558 ORTHO05D008424 9.3e-72 275.8 707 30.0
COL.COLO4_35437 Corchorus olitorius HOM05D006558 ORTHO05D008424 1.6e-71 275.0 596 31.5
MD07G1035100 Malus domestica HOM05D006558 ORTHO05D008424 3.2e-64 250.8 208 60.6
Atru.chr11.2476 Acer truncatum HOM05D006558 ORTHO05D008424 2.0e-58 231.5 187 59.9
Eucgr.H05138 Eucalyptus grandis HOM05D006558 ORTHO05D008424 2.2e-49 201.4 318 39.9
SEGI_00327 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 2.1e-47 194.9 160 56.2
Cpa.g.sc96.48 Carica papaya HOM05D006558 ORTHO05D008424 5.7e-37 160.2 217 41.9
Cc02_g29630 Coffea canephora HOM05D006558 ORTHO05D008424 3.7e-36 157.5 131 55.0
Eucgr.H05129 Eucalyptus grandis HOM05D006558 ORTHO05D008424 6.5e-33 146.7 147 49.0
CBR_g72661 Chara braunii HOM05D000019 ORTHO05D000353 3.3e-29 134.4 310 31.6
Atru.chr11.2433 Acer truncatum HOM05D006558 ORTHO05D008424 7.4e-29 133.3 144 50.7
SGA_v2.0_scaffold2G00943 Striga asiatica HOM05D006558 ORTHO05D008424 1.7e-28 132.1 237 37.1
Medtr3g019025 Medicago truncatula HOM05D006558 ORTHO05D008424 1.1e-27 129.4 89 66.3
DCAR_010374 Daucus carota HOM05D006558 ORTHO05D008424 6.9e-27 126.7 191 38.7
SEGI_36037 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 1.7e-25 122.1 247 32.4
Os03g0243200 Oryza sativa ssp. japonica HOM05D006558 ORTHO05D008424 3.8e-25 120.9 209 36.4
MD00G1214400 Malus domestica HOM05D006558 ORTHO05D008424 5.5e-24 117.1 110 56.4
Ca_02010_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 6.7e-14 83.6 59 62.7
MD07G1035200 Malus domestica HOM05D006558 ORTHO05D008424 2.2e-12 78.6 133 36.1
Medtr3g019030 Medicago truncatula HOM05D006558 ORTHO05D034019 1.0e-09 69.7 49 59.2
CAN.G261.15 Capsicum annuum HOM05D003152 ORTHO05D034019 1.3e-09 69.3 44 59.1
Nn7g37167 Nelumbo nucifera HOM05D006558 ORTHO05D008424 3.6e-07 61.2 47 63.8
Rhsim12G0031700 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.6e-07 61.2 69 49.3
MBI08_g18916_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 6.1e-07 60.5 62 50.0
Solyc05g150129.1 Solanum lycopersicum HOM05D006558 ORTHO05D008424 6.1e-07 60.5 48 54.2
Sopen05g017900 Solanum pennellii HOM05D028470 ORTHO05D037706 8.0e-07 60.1 73 42.5


User provided reference genes

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