Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 0.0e+00 1385.2 711 100.0
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 3.8e-89 333.6 688 37.4
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 5.7e-69 266.5 706 34.8
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 1.9e-64 251.5 725 33.0
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 6.1e-63 246.5 741 33.5
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 1.0e-57 229.2 726 32.8
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 2.3e-54 218.0 709 32.9
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 2.6e-53 214.5 750 30.3
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 3.4e-53 214.2 742 31.9
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 1.3e-52 212.2 721 30.8
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 1.4e-51 208.8 663 32.4
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 5.4e-51 206.8 714 31.7
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 5.4e-51 206.8 746 30.6
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 7.0e-51 206.5 742 31.7
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 5.9e-50 203.4 667 33.0
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 4.2e-48 197.2 676 32.1
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 2.1e-47 194.9 648 32.6
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 3.6e-47 194.1 741 31.0
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 3.6e-47 194.1 584 33.4
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 1.8e-46 191.8 742 30.3
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 3.4e-45 187.6 656 30.6
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.1e-43 181.0 787 29.1
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 3.1e-43 181.0 717 29.4
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 1.2e-42 179.1 698 30.9
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 8.6e-41 172.9 733 30.2
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 2.5e-40 171.4 694 31.4
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 2.1e-39 168.3 754 30.1
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 4.7e-39 167.2 748 28.3
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 8.0e-39 166.4 675 31.6
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 8.9e-38 162.9 691 29.5
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 5.7e-37 160.2 760 30.9
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 2.2e-36 158.3 766 29.2
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 9.2e-35 152.9 713 28.6
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 1.2e-34 152.5 761 31.1
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.3e-33 149.1 652 29.0
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 3.0e-33 147.9 611 29.3
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 1.5e-32 145.6 525 33.1
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.2e-31 142.5 566 32.2
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 1.2e-29 136.0 765 28.2
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 3.4e-29 134.4 741 28.2
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 7.5e-29 133.3 694 28.2
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.7e-28 132.1 792 27.8
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 5.4e-27 127.1 705 27.2
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 7.0e-27 126.7 579 28.5
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 9.2e-27 126.3 700 28.0
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 3.5e-26 124.4 586 28.8
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 4.6e-26 124.0 722 27.8
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 3.0e-25 121.3 710 25.1
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 3.9e-25 120.9 705 26.5
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 1.1e-24 119.4 677 26.3
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 9.5e-24 116.3 724 27.9
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 1.2e-23 115.9 714 26.2
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 3.6e-23 114.4 310 34.2
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 4.7e-23 114.0 731 26.1
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 6.2e-23 113.6 399 31.6
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 1.1e-22 112.8 720 27.2
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 3.1e-22 111.3 634 27.0
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 3.1e-22 111.3 716 25.8
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 4.0e-22 110.9 687 26.6
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 8.9e-22 109.8 147 49.0
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 1.2e-21 109.4 708 27.4
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 2.0e-21 108.6 691 25.3
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 7.5e-21 106.7 663 28.4
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 6.4e-20 103.6 640 25.9
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 1.1e-19 102.8 615 27.5
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 3.2e-19 101.3 703 26.7
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 5.4e-19 100.5 626 27.6
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 5.4e-19 100.5 662 26.6
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 9.2e-19 99.8 673 25.7
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 3.5e-18 97.8 643 27.4
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 4.6e-18 97.4 672 25.1
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 6.0e-18 97.1 223 39.5
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 1.7e-17 95.5 177 41.8
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 2.3e-17 95.1 688 25.6
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 6.6e-17 93.6 731 27.4
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 1.9e-16 92.0 669 26.0
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.5e-16 91.7 631 27.1
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 7.3e-16 90.1 773 24.5
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.8e-14 85.5 274 31.8
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 2.0e-13 82.0 676 25.3
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 2.6e-13 81.6 703 24.9
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 3.4e-13 81.3 267 30.0
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 3.8e-12 77.8 708 24.4
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 4.9e-12 77.4 696 26.6
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 1.4e-11 75.9 600 25.0
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 1.4e-11 75.9 660 24.4
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 1.4e-11 75.9 543 24.1
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 2.4e-11 75.1 568 25.7
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 5.4e-11 73.9 706 24.2
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 1.2e-10 72.8 607 24.4
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.2e-10 72.8 727 25.0
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 1.6e-10 72.4 657 24.8
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 1.3e-09 69.3 630 25.7
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 1.7e-09 68.9 695 24.0
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 3.9e-09 67.8 543 25.2
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 6.6e-09 67.0 642 24.3
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 8.6e-09 66.6 615 24.1
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 1.5e-08 65.9 661 25.1
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 1.9e-08 65.5 703 24.3
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 7.3e-08 63.5 673 23.3
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 1.2e-07 62.8 698 23.4
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 2.1e-07 62.0 705 26.0
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 6.2e-07 60.5 598 23.4
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 1.1e-06 59.7 599 23.2


User provided reference genes

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