Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 3.9e-99 364.8 179 100.0
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 2.3e-43 179.5 169 60.4
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 3.0e-43 179.1 181 58.6
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.1e-42 177.2 169 59.8
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 6.3e-41 171.4 179 57.0
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 1.4e-40 170.2 178 54.5
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 1.8e-40 169.9 184 52.7
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 1.2e-39 167.2 160 56.9
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 2.9e-38 162.5 187 53.5
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 5.0e-38 161.8 127 64.6
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 2.5e-37 159.5 169 55.0
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 7.2e-37 157.9 101 73.3
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 1.6e-36 156.8 154 53.2
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 1.6e-36 156.8 181 49.7
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 1.8e-35 153.3 178 47.8
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 3.0e-35 152.5 125 60.0
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 5.1e-35 151.8 173 50.3
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 6.7e-35 151.4 169 52.1
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 6.7e-35 151.4 109 68.8
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 8.8e-35 151.0 185 48.6
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 2.6e-34 149.4 102 68.6
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 3.3e-34 149.1 139 58.3
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 3.3e-34 149.1 139 58.3
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 9.7e-34 147.5 184 45.7
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 2.8e-33 146.0 121 57.9
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 2.8e-33 146.0 162 49.4
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 6.3e-33 144.8 127 61.4
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 6.3e-33 144.8 127 61.4
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 6.3e-33 144.8 127 61.4
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 8.2e-33 144.4 126 60.3
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 1.8e-32 143.3 126 59.5
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 1.8e-32 143.3 126 59.5
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 2.4e-32 142.9 149 51.7
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 3.1e-32 142.5 125 55.2
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 3.1e-32 142.5 194 45.4
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 4.1e-32 142.1 156 50.6
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 1.2e-31 140.6 153 51.6
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 2.0e-31 139.8 130 56.9
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 2.6e-31 139.4 168 48.8
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 2.6e-31 139.4 119 59.7
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 4.5e-31 138.7 132 56.1
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 4.5e-31 138.7 188 47.9
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 4.5e-31 138.7 113 60.2
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 7.7e-31 137.9 128 57.0
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 1.3e-30 137.1 105 61.9
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 2.9e-30 136.0 150 49.3
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 3.8e-30 135.6 108 61.1
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 3.8e-30 135.6 110 60.9
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 6.5e-30 134.8 167 47.9
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 6.5e-30 134.8 167 47.9
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 1.5e-29 133.7 157 49.7
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 5.5e-29 131.7 92 66.3
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 1.6e-28 130.2 107 58.9
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 3.6e-28 129.0 105 60.0
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 4.7e-28 128.6 125 54.4
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 1.8e-27 126.7 183 42.6
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 2.3e-27 126.3 101 60.4
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 2.3e-27 126.3 123 56.1
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 3.0e-27 125.9 120 54.2
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 6.7e-27 124.8 187 40.6
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 6.7e-27 124.8 166 45.2
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 1.1e-26 124.0 100 62.0
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 3.3e-26 122.5 135 53.3
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 3.3e-26 122.5 91 59.3
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 7.4e-26 121.3 179 40.8
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 7.4e-26 121.3 123 53.7
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 1.7e-25 120.2 185 39.5
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 2.2e-25 119.8 182 42.3
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 2.8e-25 119.4 109 52.3
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 2.8e-25 119.4 85 64.7
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 3.7e-25 119.0 90 63.3
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 8.2e-25 117.9 73 69.9
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 1.1e-24 117.5 102 55.9
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 1.4e-24 117.1 149 45.0
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 1.8e-24 116.7 70 70.0
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 1.8e-24 116.7 69 73.9
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.8e-24 116.7 69 73.9
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.8e-24 116.7 69 73.9
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.8e-24 116.7 69 73.9
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 2.4e-24 116.3 167 38.3
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 4.1e-24 115.5 91 63.7
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 4.1e-24 115.5 83 62.7
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 4.1e-24 115.5 77 70.1
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 1.2e-23 114.0 116 50.9
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 3.5e-23 112.5 66 71.2
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 5.9e-23 111.7 68 70.6
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 5.9e-23 111.7 176 39.2
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 1.0e-22 110.9 90 58.9
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 1.0e-22 110.9 66 69.7
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 3.8e-22 109.0 120 49.2
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 5.0e-22 108.6 169 40.8
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 4.2e-21 105.5 70 68.6
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 4.2e-21 105.5 102 52.0
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 4.2e-21 105.5 83 59.0
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 5.5e-21 105.1 169 37.9
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 6.1e-20 101.7 76 65.8
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 2.3e-19 99.8 167 37.1
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 3.4e-18 95.9 72 58.3
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 1.0e-14 84.3 57 57.9
MCO09G231 Micromonas commoda HOM05D007514 ORTHO05D009469 1.6e-07 60.5 87 35.6


User provided reference genes

Program Settings