Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 6.0e-47 190.7 108 100.0
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 2.4e-19 99.0 89 56.2
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 3.1e-19 98.6 94 53.2
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 1.5e-18 96.3 89 55.1
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 2.0e-18 95.9 87 51.7
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 2.0e-18 95.9 90 54.4
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 4.5e-18 94.7 98 53.1
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 5.9e-18 94.4 87 52.9
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 5.9e-18 94.4 87 52.9
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 5.9e-18 94.4 93 54.8
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 5.9e-18 94.4 90 52.2
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 7.7e-18 94.0 90 57.8
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 1.0e-17 93.6 86 57.0
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 1.0e-17 93.6 96 52.1
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.0e-17 93.6 98 54.1
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 1.3e-17 93.2 98 52.0
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 1.3e-17 93.2 98 51.0
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 1.3e-17 93.2 89 56.2
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 1.7e-17 92.8 87 52.9
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 1.7e-17 92.8 90 52.2
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 2.2e-17 92.4 92 52.2
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 2.2e-17 92.4 94 52.1
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 2.9e-17 92.0 97 51.5
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 2.9e-17 92.0 94 52.1
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 3.8e-17 91.7 87 49.4
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 3.8e-17 91.7 90 52.2
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 3.8e-17 91.7 90 52.2
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 3.8e-17 91.7 98 52.0
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 3.8e-17 91.7 97 50.5
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 5.0e-17 91.3 87 51.7
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 5.0e-17 91.3 88 51.1
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 5.0e-17 91.3 91 50.5
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 6.5e-17 90.9 87 51.7
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 8.5e-17 90.5 96 51.0
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 8.5e-17 90.5 94 54.3
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 8.5e-17 90.5 96 52.1
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 1.4e-16 89.7 90 50.0
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 1.9e-16 89.4 87 50.6
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 1.9e-16 89.4 94 51.1
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 1.9e-16 89.4 103 48.5
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 1.9e-16 89.4 94 56.4
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 2.5e-16 89.0 95 51.6
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 2.5e-16 89.0 90 50.0
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 2.5e-16 89.0 97 50.5
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 3.2e-16 88.6 94 52.1
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 3.2e-16 88.6 91 51.6
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 4.2e-16 88.2 97 59.8
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 4.2e-16 88.2 94 52.1
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 4.2e-16 88.2 93 53.8
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 5.5e-16 87.8 97 53.6
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 5.5e-16 87.8 86 48.8
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 7.2e-16 87.4 99 48.5
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 7.2e-16 87.4 98 52.0
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 7.2e-16 87.4 95 54.7
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 7.2e-16 87.4 91 56.0
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 7.2e-16 87.4 91 52.7
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 9.4e-16 87.0 91 50.5
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 9.4e-16 87.0 94 45.7
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 1.2e-15 86.7 90 53.3
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 1.6e-15 86.3 91 49.5
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 1.6e-15 86.3 91 49.5
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 1.6e-15 86.3 91 50.5
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 1.6e-15 86.3 91 50.5
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 1.6e-15 86.3 93 52.7
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 1.6e-15 86.3 91 51.6
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 3.6e-15 85.1 93 49.5
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 4.7e-15 84.7 91 49.5
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 4.7e-15 84.7 91 49.5
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 4.7e-15 84.7 91 57.1
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 4.7e-15 84.7 94 46.8
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 1.0e-14 83.6 91 48.4
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 1.0e-14 83.6 92 52.2
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 1.0e-14 83.6 94 48.9
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 1.4e-14 83.2 97 46.4
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 3.0e-14 82.0 95 47.4
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.1e-13 80.1 105 46.7
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 1.5e-13 79.7 95 49.5
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 2.6e-13 79.0 97 48.5
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 3.3e-13 78.6 92 44.6
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 3.3e-13 78.6 66 51.5
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 9.7e-13 77.0 98 44.9
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 2.8e-12 75.5 101 45.5
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 3.7e-12 75.1 87 48.3
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 8.2e-12 73.9 88 46.6
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 8.2e-12 73.9 93 43.0
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 1.1e-11 73.6 91 46.2
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 2.4e-11 72.4 87 47.1
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.6e-10 69.7 133 37.6
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 4.5e-10 68.2 60 51.7
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.0e-09 67.0 87 41.4
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.0e-09 67.0 78 46.2
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 2.2e-09 65.9 131 36.6
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 1.1e-08 63.5 59 44.1
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 9.4e-08 60.5 98 48.0
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 4.7e-07 58.2 104 39.4
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 1.8e-06 56.2 52 46.2


User provided reference genes

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