Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01768 Aquilegia oxysepala HOM05D005146 ORTHO05D006752 1.4e-156 556.2 280 100.0
PSO700G0287 Papaver somniferum HOM05D005146 ORTHO05D006752 7.1e-132 474.2 274 83.9
PSO170G4907 Papaver somniferum HOM05D005146 ORTHO05D006752 3.0e-130 468.8 274 83.2
Aqoxy6G00492 Aquilegia oxysepala HOM05D005146 ORTHO05D006752 4.8e-128 461.5 269 83.3
Nn6g32362 Nelumbo nucifera HOM05D005146 ORTHO05D006752 4.8e-128 461.5 274 81.4
GSVIVG01009887001 Vitis vinifera HOM05D005146 ORTHO05D006752 1.1e-127 460.3 273 80.2
Eucgr.F01641 Eucalyptus grandis HOM05D005146 ORTHO05D006752 1.5e-126 456.4 274 79.6
Manes.05G148600 Manihot esculenta HOM05D005146 ORTHO05D006752 1.5e-126 456.4 279 78.1
PGR083G0855 Punica granatum HOM05D005146 ORTHO05D006752 2.0e-126 456.1 279 78.1
Ciclev10002090m.g Citrus clementina HOM05D005146 ORTHO05D006752 2.6e-126 455.7 278 78.1
QL02p011373 Quercus lobata HOM05D005146 ORTHO05D006752 3.4e-126 455.3 273 79.9
ATR0797G002 Amborella trichopoda HOM05D005146 ORTHO05D006752 5.8e-126 454.5 273 80.6
CiPaw.07G151400 Carya illinoinensis HOM05D005146 ORTHO05D006752 5.8e-126 454.5 275 80.4
Manes.11G065850 Manihot esculenta HOM05D005146 ORTHO05D006752 5.8e-126 454.5 279 77.1
DCAR_009928 Daucus carota HOM05D005146 ORTHO05D006752 9.9e-126 453.8 272 80.1
Dinv31832 Davidia involucrata HOM05D005146 ORTHO05D006752 9.9e-126 453.8 272 80.5
Medtr3g113750 Medicago truncatula HOM05D005146 ORTHO05D006752 3.8e-125 451.8 273 79.9
TPR.G34539 Trifolium pratense HOM05D005146 ORTHO05D006752 4.9e-125 451.4 270 80.4
Actinidia15413 Actinidia chinensis HOM05D005146 ORTHO05D006752 6.4e-125 451.1 272 81.2
Rhsim06G0022400 Rhododendron simsii HOM05D005146 ORTHO05D006752 6.4e-125 451.1 275 79.6
ECA238G2776 Erigeron canadensis HOM05D005146 ORTHO05D006752 8.4e-125 450.7 270 79.6
Lalb_Chr23g0266181 Lupinus albus HOM05D005146 ORTHO05D006752 1.1e-124 450.3 270 79.6
TWI56G0936 Tripterygium wilfordii HOM05D005146 ORTHO05D006752 1.4e-124 449.9 272 79.0
Psat5g013440 Pisum sativum HOM05D005146 ORTHO05D006752 2.4e-124 449.1 270 80.0
CANSAT11G0704 Cannabis sativa HOM05D005146 ORTHO05D006752 4.2e-124 448.4 274 78.8
Cc10_g01800 Coffea canephora HOM05D005146 ORTHO05D006752 4.2e-124 448.4 274 78.5
Potri.002G023700 Populus trichocarpa HOM05D005146 ORTHO05D006752 4.2e-124 448.4 273 77.7
Thecc.09G245400 Theobroma cacao HOM05D005146 ORTHO05D006752 1.2e-123 446.8 273 77.3
RcHm_v2.0_Chr6g0302671 Rosa chinensis HOM05D005146 ORTHO05D006752 1.6e-123 446.4 270 78.9
Sabra02G0019300 Salix brachista HOM05D005146 ORTHO05D006752 2.1e-123 446.0 273 76.9
Nitab4.5_0001540g0020 Nicotiana tabacum HOM05D005146 ORTHO05D006752 2.7e-123 445.7 272 78.7
Prupe.1G367100 Prunus persica HOM05D005146 ORTHO05D006752 2.7e-123 445.7 274 77.7
Atru.chr13.312 Acer truncatum HOM05D005146 ORTHO05D006752 3.5e-123 445.3 272 77.9
Cpa.g.sc1059.3 Carica papaya HOM05D005146 ORTHO05D006752 4.6e-123 444.9 274 76.3
MD15G1013600 Malus domestica HOM05D005146 ORTHO05D006752 4.6e-123 444.9 270 78.9
Haze_04102 Corylus avellana HOM05D005146 ORTHO05D006752 6.0e-123 444.5 273 79.9
Gohir.A08G010500 Gossypium hirsutum HOM05D005146 ORTHO05D006752 1.0e-122 443.7 279 75.6
Gohir.D08G020900 Gossypium hirsutum HOM05D005146 ORTHO05D006752 1.3e-122 443.4 279 75.6
Cfa006669 Carpinus fangiana HOM05D005146 ORTHO05D006752 1.7e-122 443.0 273 79.5
CAN.G311.14 Capsicum annuum HOM05D005146 ORTHO05D006752 3.0e-122 442.2 272 77.9
Migut.N03153 Erythranthe guttata HOM05D005146 ORTHO05D006752 3.9e-122 441.8 272 76.5
PGSC0003DMG400003775 Solanum tuberosum HOM05D005146 ORTHO05D006752 3.9e-122 441.8 272 77.2
Solyc04g081310.3 Solanum lycopersicum HOM05D005146 ORTHO05D006752 6.6e-122 441.0 272 77.2
Sopen04g034930 Solanum pennellii HOM05D005146 ORTHO05D006752 6.6e-122 441.0 272 77.2
Lsat_1_v5_gn_2_8601 Lactuca sativa HOM05D005146 ORTHO05D006752 1.5e-121 439.9 270 78.5
FAN27G1976 Fragaria x ananassa HOM05D005146 ORTHO05D006752 1.9e-121 439.5 270 77.4
Glyma.20G014100 Glycine max HOM05D005146 ORTHO05D006752 2.5e-121 439.1 270 77.8
unitig_746.g26814 Utricularia gibba HOM05D005146 ORTHO05D006752 2.5e-121 439.1 274 75.9
Glyma.07G217500 Glycine max HOM05D005146 ORTHO05D006752 3.3e-121 438.7 270 77.8
THA.LOC104825772 Tarenaya hassleriana HOM05D005146 ORTHO05D006752 4.3e-121 438.3 272 76.5
FvH4_2g38650 Fragaria vesca HOM05D005146 ORTHO05D006752 5.6e-121 438.0 270 77.0
FAN15G2679 Fragaria x ananassa HOM05D005146 ORTHO05D006752 7.3e-121 437.6 270 77.0
HanXRQChr06g0183611 Helianthus annuus HOM05D005146 ORTHO05D006752 7.3e-121 437.6 270 78.5
CSS0007392 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 9.6e-121 437.2 272 78.3
CSS0032974 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 9.6e-121 437.2 272 78.3
Phvul.001G002400 Phaseolus vulgaris HOM05D005146 ORTHO05D006752 1.3e-120 436.8 270 77.0
Hund05199 Selenicereus undatus HOM05D005146 ORTHO05D006752 1.3e-120 436.8 274 75.2
SGA_v2.0_scaffold12G05971 Striga asiatica HOM05D005146 ORTHO05D006752 2.1e-120 436.0 272 76.5
Ca_14210_v3 Cicer arietinum L. HOM05D005146 ORTHO05D006752 2.8e-120 435.6 270 77.4
VMungo0251G0853 Vigna mungo HOM05D005146 ORTHO05D006752 6.2e-120 434.5 270 75.9
FAN20G2808 Fragaria x ananassa HOM05D005146 ORTHO05D006752 8.1e-120 434.1 270 76.7
MD08G1014100 Malus domestica HOM05D005146 ORTHO05D006752 8.1e-120 434.1 270 76.7
Ah.08g209140 Amaranthus hybridus HOM05D005146 ORTHO05D006752 5.3e-119 431.4 306 69.6
CsaV3_2G029420 Cucumis sativus L. HOM05D005146 ORTHO05D006752 9.0e-119 430.6 270 75.9
Aa31LG2G18510 Aethionema arabicum HOM05D005146 ORTHO05D006752 1.5e-118 429.9 274 75.5
EL10Ac6g13895 Beta vulgaris HOM05D005146 ORTHO05D006752 2.0e-118 429.5 308 69.5
Sed0001191 Sechium edule HOM05D005146 ORTHO05D006752 2.0e-118 429.5 270 74.4
Lj1g0002754 Lotus japonicus HOM05D005146 ORTHO05D006752 2.6e-118 429.1 270 75.6
Oeu020876.1 Olea europaea HOM05D005146 ORTHO05D006752 5.8e-118 427.9 262 77.9
arahy.Tifrunner.gnm1.ann1.DQ6KFY Arachis hypogaea HOM05D005146 ORTHO05D006752 1.3e-117 426.8 270 74.8
CARHR239690 Cardamine hirsuta HOM05D005146 ORTHO05D006752 1.3e-117 426.8 274 74.8
AT4G31790 Arabidopsis thaliana HOM05D005146 ORTHO05D006752 1.7e-117 426.4 276 73.9
arahy.Tifrunner.gnm1.ann1.RM6BI2 Arachis hypogaea HOM05D005146 ORTHO05D006752 1.7e-117 426.4 270 74.8
Zm00001eb017150 Zea mays HOM05D005146 ORTHO05D006752 2.9e-117 425.6 273 72.2
arahy.Tifrunner.gnm1.ann1.VN499F Arachis hypogaea HOM05D005146 ORTHO05D006752 8.4e-117 424.1 270 74.4
Carub.0007s0877 Capsella rubella HOM05D005146 ORTHO05D006752 8.4e-117 424.1 271 74.5
Os03g0355800 Oryza sativa ssp. japonica HOM05D005146 ORTHO05D006752 1.9e-116 422.9 273 71.8
AL7G20220 Arabidopsis lyrata HOM05D005146 ORTHO05D006752 2.4e-116 422.5 276 73.6
HPP92_027733 Vanilla planifolia HOM05D005146 ORTHO05D006752 2.4e-116 422.5 273 73.3
Sp7g29580 Schrenkiella parvula HOM05D005146 ORTHO05D006752 4.2e-116 421.8 271 73.8
COL.COLO4_37538 Corchorus olitorius HOM05D005146 ORTHO05D006752 5.4e-116 421.4 257 79.4
Thhalv10025950m.g Eutrema salsugineum HOM05D005146 ORTHO05D006752 7.1e-116 421.0 274 74.1
BcaC09g51970 Brassica carinata HOM05D005146 ORTHO05D006752 9.3e-116 420.6 271 73.1
BolC1t00708H Brassica oleracea HOM05D005146 ORTHO05D006752 9.3e-116 420.6 271 73.1
BraA01t00610Z Brassica rapa HOM05D005146 ORTHO05D006752 1.2e-115 420.2 271 73.1
C01p07160 Brassica napus HOM05D005146 ORTHO05D006752 1.6e-115 419.9 271 73.1
AUR62019460 Chenopodium quinoa HOM05D005146 ORTHO05D006752 1.6e-115 419.9 274 73.4
BcaNung05185 Brassica carinata HOM05D005146 ORTHO05D006752 2.7e-115 419.1 271 72.7
A01p06490 Brassica napus HOM05D005146 ORTHO05D006752 2.7e-115 419.1 271 73.1
Lj5g0000481 Lotus japonicus HOM05D005146 ORTHO05D006752 5.1e-114 414.8 270 74.1
arahy.Tifrunner.gnm1.ann1.NX94TN Arachis hypogaea HOM05D005146 ORTHO05D006752 3.7e-112 408.7 300 67.0
MBI09_g15694_MAGBIO Magnolia biondii HOM05D005146 ORTHO05D006752 3.1e-111 405.6 384 57.6
Pp3c25_4490 Physcomitrium patens HOM05D005146 ORTHO05D006752 1.3e-109 400.2 270 68.5
AagrBONN_evm.TU.Sc2ySwM_117.1420 Anthoceros agrestis HOM05D005146 ORTHO05D006752 3.8e-109 398.7 270 67.4
Duzib150G0501 Durio zibethinus HOM05D005146 ORTHO05D006752 1.1e-108 397.1 272 71.0
ClCG08G014400 Citrullus lanatus HOM05D005146 ORTHO05D006752 1.4e-108 396.7 270 70.7
Mapoly0107s0028 Marchantia polymorpha HOM05D005146 ORTHO05D006752 1.9e-108 396.4 270 67.0
Gorai.004G015300 Gossypium raimondii HOM05D005146 ORTHO05D006752 4.2e-108 395.2 279 68.8
AagrBONN_evm.TU.Sc2ySwM_368.2751 Anthoceros agrestis HOM05D005146 ORTHO05D006752 4.6e-107 391.7 270 66.7
SalBow3G2629 Salvia bowleyana HOM05D005146 ORTHO05D006752 8.7e-106 387.5 242 75.2
MELO3C011001.2 Cucumis melo HOM05D005146 ORTHO05D006752 1.5e-105 386.7 282 67.4
Peaxi162Scf00438g00626 Petunia axillaris HOM05D005146 ORTHO05D006752 4.3e-105 385.2 272 69.5
HPP92_026026 Vanilla planifolia HOM05D005146 ORTHO05D006752 1.8e-103 379.8 246 73.2
CDE05G1835 Ceratophyllum demersum HOM05D005146 ORTHO05D006752 9.0e-103 377.5 244 73.4
vmacro21720 Vaccinium macrocarpon HOM05D005146 ORTHO05D006752 3.8e-101 372.1 225 79.6
SMO146G0393 Selaginella moellendorffii HOM05D005146 ORTHO05D006752 9.3e-100 367.5 272 62.9
Hma1.2p1_0638F.1_g193760 Hydrangea macrophylla HOM05D005146 ORTHO05D006752 1.2e-99 367.1 225 78.7
CSS0032399 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 5.7e-97 358.2 252 72.2
CBR_g41468 Chara braunii HOM05D005146 ORTHO05D006752 7.4e-97 357.8 270 64.1
RcHm_v2.0_Chr7g0221331 Rosa chinensis HOM05D005146 ORTHO05D006752 3.7e-96 355.5 270 66.3
Cre05.g233300 Chlamydomonas reinhardtii HOM05D005146 ORTHO05D006752 5.3e-95 351.7 275 61.1
TAR628G0140 Trochodendron aralioides HOM05D005146 ORTHO05D006752 5.0e-93 345.1 197 85.3
Lsat_1_v5_gn_2_8681 Lactuca sativa HOM05D004999 ORTHO05D007513 1.1e-89 334.0 220 75.0
MCO08G273 Micromonas commoda HOM05D005146 ORTHO05D006752 7.4e-89 331.3 273 58.2
PRCOL_00004436 Prasinoderma coloniale HOM05D005146 ORTHO05D006752 5.3e-87 325.1 297 55.6
Sc26g0004380 Simmondsia chinensis HOM05D005146 ORTHO05D006752 2.8e-80 302.8 187 76.5
BolC8t49001H Brassica oleracea HOM05D005146 ORTHO05D006752 4.1e-79 298.9 271 57.6
C08p13630 Brassica napus HOM05D005146 ORTHO05D006752 1.5e-78 297.0 271 57.2
C09p44220 Brassica napus HOM05D005146 ORTHO05D006752 2.0e-78 296.6 271 56.1
ATR0816G001 Amborella trichopoda HOM05D005146 ORTHO05D006752 3.8e-77 292.4 168 85.1
Haze_26822 Corylus avellana HOM05D005146 ORTHO05D006752 4.2e-76 288.9 285 49.1
Oeu039057.1 Olea europaea HOM05D005146 ORTHO05D006752 3.0e-74 282.7 244 59.8
BcaC04g20385 Brassica carinata HOM05D005146 ORTHO05D006752 1.8e-71 273.5 272 53.7
Lj4A797T61 Lonicera japonica HOM05D005146 ORTHO05D006752 1.4e-66 257.3 152 82.9
MSTRG.25237 Avicennia marina HOM05D005146 ORTHO05D006752 8.8e-66 254.6 156 76.3
BcaC04g20389 Brassica carinata HOM05D005146 ORTHO05D006752 2.6e-65 253.1 271 50.2
Medtr1g107520 Medicago truncatula HOM05D005146 ORTHO05D006752 6.3e-64 248.4 165 74.5
AUR62036170 Chenopodium quinoa HOM05D005146 ORTHO05D006752 6.8e-58 228.4 210 56.7
BcaC04g20387 Brassica carinata HOM05D005146 ORTHO05D006752 1.8e-47 193.7 272 44.1
CSS0002428 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 1.2e-46 191.0 275 45.1
Duzib170G0783 Durio zibethinus HOM05D005146 ORTHO05D006752 3.5e-46 189.5 273 41.4
BolC9t57294H Brassica oleracea HOM05D005146 ORTHO05D006752 5.9e-46 188.7 153 62.1
MELO3C029148.2 Cucumis melo HOM05D005146 ORTHO05D006752 2.8e-43 179.9 131 66.4
Medtr3g114210 Medicago truncatula HOM05D005146 ORTHO05D006752 3.0e-37 159.8 159 56.6
Lj4A797T60 Lonicera japonica HOM05D005146 ORTHO05D006752 2.0e-33 147.1 92 75.0
SEGI_30125 Sequoiadendron giganteum HOM05D005146 ORTHO05D006752 2.1e-27 127.1 92 66.3
BolC8t52160H Brassica oleracea HOM05D005146 ORTHO05D032927 2.8e-27 126.7 176 44.3
Oeu039054.1 Olea europaea HOM05D000784 ORTHO05D000116 1.1e-26 124.8 79 72.2
BcaC04g20388 Brassica carinata HOM05D005146 ORTHO05D006752 2.3e-26 123.6 185 42.7
BcaC07g41610 Brassica carinata HOM05D005146 ORTHO05D032927 2.3e-26 123.6 268 34.0
Lsat_1_v5_gn_2_8581 Lactuca sativa HOM05D000202 ORTHO05D000117 6.4e-24 115.5 135 45.2
C08p46100 Brassica napus HOM05D005146 ORTHO05D032927 4.1e-23 112.8 97 57.7
Lsat_1_v5_gn_2_8661 Lactuca sativa HOM05D000202 ORTHO05D000117 5.4e-23 112.5 135 44.4
MELO3C032066.2 Cucumis melo HOM05D005146 ORTHO05D006752 2.0e-17 94.0 73 58.9
CAN.G1688.3 Capsicum annuum HOM05D005146 ORTHO05D011342 5.4e-15 85.9 57 68.4
BcaNung04119 Brassica carinata HOM05D001941 ORTHO05D002198 1.3e-11 74.7 45 75.6
Actinidia16979 Actinidia chinensis HOM05D005146 ORTHO05D006752 1.8e-10 70.9 106 41.5
MELO3C033356.2 Cucumis melo HOM05D005146 ORTHO05D166957 1.4e-07 61.2 49 53.1


User provided reference genes

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