Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 0.0e+00 1086.2 550 100.0
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 9.3e-237 823.5 571 75.5
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 1.3e-233 813.1 545 74.9
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 3.7e-233 811.6 556 75.0
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 6.3e-233 810.8 558 74.9
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 4.1e-232 808.1 550 74.2
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 2.0e-231 805.8 559 74.4
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 4.5e-231 804.7 545 74.1
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 4.5e-231 804.7 545 74.5
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 2.3e-227 792.3 553 73.6
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 3.0e-227 792.0 545 73.9
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 3.9e-227 791.6 545 73.4
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 2.0e-226 789.3 525 75.4
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 9.7e-226 786.9 559 72.8
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 1.3e-225 786.6 545 73.6
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 2.2e-225 785.8 542 74.2
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 3.7e-225 785.0 557 72.5
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 1.4e-224 783.1 549 74.3
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 2.4e-224 782.3 557 72.4
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 4.1e-224 781.6 546 72.7
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 5.0e-222 774.6 546 72.2
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 8.5e-222 773.9 562 71.9
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 3.6e-220 768.5 571 70.8
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 7.9e-220 767.3 559 69.9
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 1.8e-219 766.1 567 71.6
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 3.0e-219 765.4 543 71.6
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 3.0e-219 765.4 533 72.6
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 5.2e-219 764.6 555 70.6
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 6.7e-219 764.2 533 72.2
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 6.7e-219 764.2 566 71.0
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 1.5e-218 763.1 520 74.2
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 1.5e-218 763.1 541 72.3
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 2.6e-218 762.3 545 71.0
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 3.3e-218 761.9 535 72.3
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 2.2e-217 759.2 561 70.6
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 3.7e-217 758.4 508 74.0
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 4.8e-217 758.1 545 70.6
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 8.2e-217 757.3 517 73.7
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 1.4e-216 756.5 545 70.5
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 1.4e-216 756.5 563 68.7
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 1.8e-216 756.1 541 69.9
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 2.4e-216 755.7 552 69.4
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 4.1e-216 755.0 449 82.0
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 4.1e-216 755.0 542 70.5
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 5.3e-216 754.6 547 69.8
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 7.0e-216 754.2 559 69.4
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 9.1e-216 753.8 557 70.4
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 2.0e-215 752.7 564 68.6
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 2.0e-215 752.7 550 68.4
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 7.7e-215 750.7 553 70.0
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 1.3e-214 750.0 561 68.6
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 3.8e-214 748.4 500 74.6
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 5.0e-214 748.0 537 70.6
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 5.0e-214 748.0 550 69.3
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 1.5e-213 746.5 485 75.7
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 1.9e-213 746.1 519 72.8
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 1.9e-213 746.1 488 75.6
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 9.4e-213 743.8 519 72.8
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 6.1e-212 741.1 552 69.2
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 6.1e-212 741.1 524 71.0
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 1.0e-211 740.3 514 71.4
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 1.0e-211 740.3 519 72.4
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 1.8e-211 739.6 551 69.1
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.8e-211 739.6 476 77.5
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 4.0e-211 738.4 513 71.9
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 6.7e-211 737.6 503 73.8
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 4.4e-210 734.9 557 67.9
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 1.7e-209 733.0 544 68.4
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 2.2e-209 732.6 545 69.9
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 8.2e-209 730.7 536 68.7
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 8.2e-209 730.7 553 69.1
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 1.4e-208 729.9 554 67.3
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 1.4e-208 729.9 534 69.3
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 1.4e-208 729.9 533 68.9
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 1.8e-208 729.6 504 73.2
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 4.1e-208 728.4 534 69.1
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 5.3e-208 728.0 545 69.2
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 5.3e-208 728.0 567 67.7
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 9.1e-208 727.2 490 72.2
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 1.6e-207 726.5 553 69.3
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 2.7e-207 725.7 485 73.2
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 4.5e-207 724.9 558 67.0
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 5.9e-207 724.5 534 68.7
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 1.7e-206 723.0 445 79.1
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 6.5e-206 721.1 516 70.2
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 2.5e-205 719.2 512 72.3
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 5.5e-205 718.0 451 77.6
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 7.2e-205 717.6 503 71.0
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 9.4e-205 717.2 567 66.8
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 1.2e-204 716.8 492 72.6
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 1.0e-203 713.8 615 61.6
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 8.8e-203 710.7 514 69.6
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 2.6e-202 709.1 518 69.5
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 9.8e-202 707.2 424 78.8
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 3.7e-201 705.3 460 73.3
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 5.5e-197 691.4 518 68.1
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 5.6e-181 638.3 372 83.1
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 3.1e-179 632.5 553 63.8
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 3.2e-176 622.5 508 61.8
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 3.5e-175 619.0 434 71.9
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 7.1e-160 568.2 378 75.7
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 6.0e-159 565.1 464 58.6
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 7.8e-159 564.7 430 69.1
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 2.2e-153 546.6 409 69.9
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 2.7e-151 539.7 434 59.9
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 2.7e-143 513.1 435 57.0
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 1.7e-137 493.8 442 56.6
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 1.3e-113 414.5 462 47.4
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 1.2e-106 391.3 479 46.1
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 1.5e-106 391.0 500 46.4
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 2.2e-105 387.1 507 46.2
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 2.3e-102 377.1 440 48.4
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 3.9e-102 376.3 255 74.5
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 4.4e-101 372.9 485 46.2
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 9.7e-101 371.7 512 44.9
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 8.2e-100 368.6 477 43.6
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 6.5e-97 359.0 545 43.7
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 8.3e-92 342.0 538 42.6
PRCOL_00003752 Prasinoderma coloniale HOM05D005713 ORTHO05D007751 2.4e-83 313.9 482 39.2
QL07p047677 Quercus lobata HOM05D005713 ORTHO05D007751 7.0e-83 312.4 176 84.7
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 5.9e-74 282.7 168 79.8
QL07p047674 Quercus lobata HOM05D005713 ORTHO05D021118 4.0e-46 190.3 207 54.6
Glyma.12G045901 Glycine max HOM05D005713 ORTHO05D007751 9.9e-45 185.7 162 61.1
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 1.8e-38 164.9 137 61.3
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 4.9e-36 156.8 131 62.6
Actinidia27913 Actinidia chinensis HOM05D005713 ORTHO05D007751 4.0e-30 137.1 78 82.1
Lj5g0025918 Lotus japonicus HOM05D005713 ORTHO05D236034 1.0e-25 122.5 105 56.2
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 4.3e-24 117.1 120 48.3
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 5.3e-22 110.2 104 60.6
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 9.3e-19 99.4 58 82.8
PGSC0003DMG400003326 Solanum tuberosum HOM05D005713 ORTHO05D021118 1.6e-10 72.0 106 46.2
Actinidia27912 Actinidia chinensis HOM05D005713 ORTHO05D021118 4.6e-10 70.5 135 43.0
PGSC0003DMG400019020 Solanum tuberosum HOM05D005713 ORTHO05D021118 8.7e-09 66.2 106 43.4
QL11p041915 Quercus lobata HOM05D005713 ORTHO05D021118 1.5e-08 65.5 137 40.9
QL11p041469 Quercus lobata HOM05D005713 ORTHO05D338114 3.7e-07 60.8 38 76.3
Hma1.2p1_0066F.1_g036790 Hydrangea macrophylla HOM05D005713 ORTHO05D021118 3.1e-06 57.8 132 39.4


User provided reference genes

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