Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01668 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 9.8e-59 231.1 243 100.0
Aqoxy5G01653 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 5.4e-33 145.6 97 76.3
Aqoxy2G01755 Aquilegia oxysepala HOM05D003825 ORTHO05D004491 9.9e-27 124.8 82 75.6
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.6e-16 90.9 99 49.5
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 3.3e-14 83.2 67 58.2
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 8.1e-13 78.6 102 43.1
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 6.9e-12 75.5 100 46.0
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 9.0e-12 75.1 89 46.1
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 1.2e-11 74.7 75 54.7
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.2e-11 74.7 99 49.5
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.5e-11 74.3 99 49.5
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 2.6e-11 73.6 100 40.0
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 3.4e-11 73.2 99 41.4
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 4.4e-11 72.8 100 41.0
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 7.6e-11 72.0 98 41.8
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 7.6e-11 72.0 97 44.3
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.3e-10 71.2 83 45.8
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 2.2e-10 70.5 96 44.8
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 6.4e-10 68.9 83 48.2
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 3.2e-09 66.6 105 42.9
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 5.4e-09 65.9 106 43.4
CSS0039349 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 9.3e-09 65.1 99 40.4
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 9.3e-09 65.1 100 38.0
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 9.3e-09 65.1 100 38.0
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 2.1e-08 63.9 99 42.4
DCAR_022107 Daucus carota HOM05D007556 ORTHO05D002252 6.0e-08 62.4 106 36.8
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 1.0e-07 61.6 115 39.1
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.3e-07 61.2 100 37.0
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 1.3e-07 61.2 62 50.0
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.7e-07 60.8 102 38.2
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 2.3e-07 60.5 68 55.9
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 3.0e-07 60.1 98 33.7
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.0e-07 60.1 100 37.0
TWI31G0501 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 3.0e-07 60.1 59 47.5
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 3.0e-07 60.1 99 35.4
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 3.9e-07 59.7 69 44.9
GSVIVG01031940001 Vitis vinifera HOM05D007227 ORTHO05D002252 3.9e-07 59.7 97 35.1
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 5.1e-07 59.3 97 40.2
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 6.6e-07 58.9 63 50.8
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 6.6e-07 58.9 91 38.5
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 8.7e-07 58.5 65 49.2
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.1e-06 58.2 100 37.0
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.1e-06 58.2 93 39.8
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 1.1e-06 58.2 65 47.7
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 1.5e-06 57.8 97 39.2
Thecc.02G037700 Theobroma cacao HOM05D007227 ORTHO05D002252 1.5e-06 57.8 59 44.1
Thecc.02G086700 Theobroma cacao HOM05D007556 ORTHO05D002252 1.9e-06 57.4 79 46.8
Atru.chr5.2996 Acer truncatum HOM05D007556 ORTHO05D002252 2.5e-06 57.0 118 32.2
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 2.5e-06 57.0 67 43.3
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 2.5e-06 57.0 65 49.2
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 2.5e-06 57.0 113 35.4
Nitab4.5_0000959g0100 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.3e-06 56.6 69 44.9
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 4.3e-06 56.2 87 34.5
Sc08g0000440 Simmondsia chinensis HOM05D007227 ORTHO05D002252 4.3e-06 56.2 59 49.2
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 4.3e-06 56.2 97 39.2
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 5.6e-06 55.8 63 39.7
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 7.3e-06 55.5 79 36.7
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.6e-06 55.1 85 36.5
TWI75G0964 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 9.6e-06 55.1 52 51.9


User provided reference genes

Program Settings