Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01635 Aquilegia oxysepala HOM05D003643 ORTHO05D005001 6.9e-268 926.8 486 100.0
PSO675G9021 Papaver somniferum HOM05D003643 ORTHO05D005001 4.7e-192 674.9 501 69.9
Nn7g37591 Nelumbo nucifera HOM05D003643 ORTHO05D005001 2.0e-190 669.5 494 71.9
TAR365G0076 Trochodendron aralioides HOM05D003643 ORTHO05D005001 2.0e-190 669.5 483 70.4
ATR0743G136 Amborella trichopoda HOM05D003643 ORTHO05D005001 3.9e-186 655.2 500 69.6
MBI07_g18519_MAGBIO Magnolia biondii HOM05D003643 ORTHO05D005001 4.8e-184 648.3 501 69.5
CDE02G0779 Ceratophyllum demersum HOM05D003643 ORTHO05D005001 3.1e-183 645.6 498 66.3
PGR083G1065 Punica granatum HOM05D003643 ORTHO05D005001 9.0e-183 644.0 489 65.6
CSS0044821 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 2.6e-182 642.5 479 67.0
Zm00001eb058120 Zea mays HOM05D003643 ORTHO05D005001 2.6e-182 642.5 491 66.2
Cpa.g.sc178.8 Carica papaya HOM05D003643 ORTHO05D005001 9.9e-182 640.6 496 65.1
Potri.004G075600 Populus trichocarpa HOM05D003643 ORTHO05D005001 9.9e-182 640.6 497 65.4
Cfa023544 Carpinus fangiana HOM05D003643 ORTHO05D005001 3.8e-181 638.6 488 65.0
Duzib268G1178 Durio zibethinus HOM05D003643 ORTHO05D005001 3.8e-181 638.6 491 68.4
Gohir.D10G121400 Gossypium hirsutum HOM05D003643 ORTHO05D005001 8.4e-181 637.5 487 68.4
Gorai.011G133500 Gossypium raimondii HOM05D003643 ORTHO05D005001 8.4e-181 637.5 487 68.4
Lj1C1143T1 Lonicera japonica HOM05D003643 ORTHO05D005001 1.4e-180 636.7 490 65.1
MD10G1234900 Malus domestica HOM05D003643 ORTHO05D005001 1.9e-180 636.3 479 66.6
HanXRQChr07g0189641 Helianthus annuus HOM05D003643 ORTHO05D005001 2.4e-180 636.0 482 66.6
MD05G1254800 Malus domestica HOM05D003643 ORTHO05D005001 7.1e-180 634.4 486 65.6
Atru.chr1.1970 Acer truncatum HOM05D003643 ORTHO05D005001 2.1e-179 632.9 489 64.8
Actinidia22386 Actinidia chinensis HOM05D003643 ORTHO05D005001 3.5e-179 632.1 489 66.9
MELO3C021772.2 Cucumis melo HOM05D003643 ORTHO05D005001 7.9e-179 630.9 486 66.7
Dinv35809 Davidia involucrata HOM05D003643 ORTHO05D005001 7.9e-179 630.9 497 65.0
Lsat_1_v5_gn_5_36401 Lactuca sativa HOM05D003643 ORTHO05D005001 1.0e-178 630.6 482 65.4
Os08g0471900 Oryza sativa ssp. japonica HOM05D003643 ORTHO05D005001 1.3e-178 630.2 494 65.4
Cc09_g06330 Coffea canephora HOM05D003643 ORTHO05D005001 2.3e-178 629.4 488 64.8
Glyma.07G222900 Glycine max HOM05D003643 ORTHO05D005001 2.3e-178 629.4 492 64.4
Thecc.04G162500 Theobroma cacao HOM05D003643 ORTHO05D005001 2.3e-178 629.4 486 67.1
CsaV3_1G046560 Cucumis sativus L. HOM05D003643 ORTHO05D005001 3.0e-178 629.0 486 65.4
Glyma.20G021900 Glycine max HOM05D003643 ORTHO05D005001 3.9e-178 628.6 491 64.6
Psat0s5231g0040 Pisum sativum HOM05D003643 ORTHO05D005001 8.7e-178 627.5 497 63.6
Prupe.4G109100 Prunus persica HOM05D003643 ORTHO05D005001 8.7e-178 627.5 493 64.7
TWI77G0757 Tripterygium wilfordii HOM05D003643 ORTHO05D005001 8.7e-178 627.5 493 65.3
Migut.M01969 Erythranthe guttata HOM05D003643 ORTHO05D005001 4.3e-177 625.2 480 66.0
THA.LOC104822105 Tarenaya hassleriana HOM05D003643 ORTHO05D005001 7.4e-177 624.4 490 63.9
vmacro11251 Vaccinium macrocarpon HOM05D003643 ORTHO05D005001 7.4e-177 624.4 516 63.2
BcaB01g04707 Brassica carinata HOM05D003643 ORTHO05D005001 1.3e-176 623.6 487 64.3
CARHR191050 Cardamine hirsuta HOM05D003643 ORTHO05D005001 1.3e-176 623.6 483 64.8
CiPaw.03G114100 Carya illinoinensis HOM05D003643 ORTHO05D005001 1.3e-176 623.6 491 63.3
CARHR215770 Cardamine hirsuta HOM05D003643 ORTHO05D005001 2.1e-176 622.9 478 66.1
HanXRQChr14g0433091 Helianthus annuus HOM05D003643 ORTHO05D005001 2.1e-176 622.9 475 64.8
RcHm_v2.0_Chr5g0019781 Rosa chinensis HOM05D003643 ORTHO05D005001 3.6e-176 622.1 484 65.7
Lj1g0023184 Lotus japonicus HOM05D003643 ORTHO05D005001 4.8e-176 621.7 496 63.1
Lj1g0022937 Lotus japonicus HOM05D003643 ORTHO05D005001 8.1e-176 620.9 492 63.6
Phvul.L009001 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 8.1e-176 620.9 495 63.8
A03p10790 Brassica napus HOM05D003643 ORTHO05D005001 2.4e-175 619.4 486 64.4
Thhalv10013358m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 2.4e-175 619.4 486 64.2
Phvul.L001601 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.4e-175 619.4 495 63.6
Sabra04G0050300 Salix brachista HOM05D003643 ORTHO05D005001 2.4e-175 619.4 497 63.2
AL6G33500 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 3.1e-175 619.0 486 64.2
BcaC07g37705 Brassica carinata HOM05D003643 ORTHO05D005001 3.1e-175 619.0 483 64.8
Carub.0006s2022 Capsella rubella HOM05D003643 ORTHO05D005001 3.1e-175 619.0 485 64.1
Phvul.003G000252 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.1e-175 619.0 484 64.9
FAN21G1938 Fragaria x ananassa HOM05D003643 ORTHO05D005001 4.0e-175 618.6 484 64.7
HPP92_015903 Vanilla planifolia HOM05D003643 ORTHO05D005001 6.9e-175 617.8 494 64.2
Psat6g043080 Pisum sativum HOM05D003643 ORTHO05D005001 9.0e-175 617.5 497 63.0
AT5G22480 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 1.2e-174 617.1 486 64.2
TPR.G20995 Trifolium pratense HOM05D003643 ORTHO05D005001 1.2e-174 617.1 488 63.1
FAN25G0143 Fragaria x ananassa HOM05D003643 ORTHO05D005001 1.5e-174 616.7 484 64.9
Sc22g0000430 Simmondsia chinensis HOM05D003643 ORTHO05D005001 2.0e-174 616.3 489 65.4
VMungo0251G0454 Vigna mungo HOM05D003643 ORTHO05D005001 2.0e-174 616.3 492 63.6
BcaC01g06578 Brassica carinata HOM05D003643 ORTHO05D005001 3.4e-174 615.5 486 63.6
Ca_18772_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 3.4e-174 615.5 492 62.8
A10p18340 Brassica napus HOM05D003643 ORTHO05D005001 4.5e-174 615.1 483 63.8
CANSAT21G2447 Cannabis sativa HOM05D003643 ORTHO05D005001 4.5e-174 615.1 496 62.9
FvH4_3g12070 Fragaria vesca HOM05D003643 ORTHO05D005001 4.5e-174 615.1 484 64.7
Eucgr.D01040 Eucalyptus grandis HOM05D003643 ORTHO05D005001 7.6e-174 614.4 489 63.0
SpUn0005_0160 Schrenkiella parvula HOM05D003643 ORTHO05D005001 7.6e-174 614.4 486 63.6
AL7G45920 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 2.2e-173 612.8 486 63.4
A08p10150 Brassica napus HOM05D003643 ORTHO05D005001 2.2e-173 612.8 483 64.2
BraA10t43914Z Brassica rapa HOM05D003643 ORTHO05D005001 2.2e-173 612.8 483 63.6
Lalb_Chr16g0385301 Lupinus albus HOM05D003643 ORTHO05D005001 2.2e-173 612.8 490 64.1
Sed0017297 Sechium edule HOM05D003643 ORTHO05D005001 2.2e-173 612.8 490 62.9
BraA03t10388Z Brassica rapa HOM05D003643 ORTHO05D005001 2.9e-173 612.5 497 63.0
BraA08t33014Z Brassica rapa HOM05D003643 ORTHO05D005001 2.9e-173 612.5 487 64.1
GSVIVG01012096001 Vitis vinifera HOM05D003643 ORTHO05D005001 2.9e-173 612.5 492 63.2
Thhalv10027733m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 3.8e-173 612.1 486 63.8
SGA_v2.0_scaffold298G47674 Striga asiatica HOM05D003643 ORTHO05D005001 3.8e-173 612.1 499 62.3
AT5G37340 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 8.4e-173 610.9 486 63.6
BcaC04g19578 Brassica carinata HOM05D003643 ORTHO05D005001 1.9e-172 609.8 488 63.5
BcaB04g18097 Brassica carinata HOM05D003643 ORTHO05D005001 3.2e-172 609.0 479 64.3
C09p54110 Brassica napus HOM05D003643 ORTHO05D005001 3.2e-172 609.0 488 63.5
BolC9t58281H Brassica oleracea HOM05D003643 ORTHO05D005001 3.2e-172 609.0 488 63.5
Oeu060347.1 Olea europaea HOM05D003643 ORTHO05D005001 4.2e-172 608.6 483 61.9
Sopen02g018250 Solanum pennellii HOM05D003643 ORTHO05D005001 5.5e-172 608.2 489 62.2
Solyc02g069120.3 Solanum lycopersicum HOM05D003643 ORTHO05D005001 1.2e-171 607.1 489 62.2
PGSC0003DMG400010363 Solanum tuberosum HOM05D003643 ORTHO05D005001 1.2e-171 607.1 489 62.0
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 1.6e-171 606.7 491 61.9
Sp6g22770 Schrenkiella parvula HOM05D003643 ORTHO05D005001 4.6e-171 605.1 486 63.8
BcaB08g36427 Brassica carinata HOM05D003643 ORTHO05D005001 3.0e-170 602.4 499 62.3
BolC3t13712H Brassica oleracea HOM05D003643 ORTHO05D005001 6.7e-170 601.3 489 62.6
Nitab4.5_0002056g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 6.7e-170 601.3 489 61.8
Rhsim04G0157300 Rhododendron simsii HOM05D003643 ORTHO05D005001 1.1e-169 600.5 531 61.6
FAN16G1159 Fragaria x ananassa HOM05D003643 ORTHO05D005001 9.6e-169 597.4 484 64.0
SalBow8G4557 Salvia bowleyana HOM05D003643 ORTHO05D005001 4.8e-168 595.1 491 62.3
SalBow8G5428 Salvia bowleyana HOM05D003643 ORTHO05D005001 4.8e-168 595.1 491 62.3
CAN.G1222.6 Capsicum annuum HOM05D003643 ORTHO05D005001 6.2e-168 594.7 489 61.6
COL.COLO4_08070 Corchorus olitorius HOM05D003643 ORTHO05D005001 6.2e-168 594.7 538 58.7
Medtr4g083780 Medicago truncatula HOM05D003643 ORTHO05D005001 6.2e-168 594.7 487 61.8
Pp3c15_5070 Physcomitrium patens HOM05D003643 ORTHO05D005001 9.0e-167 590.9 498 59.6
Aa31LG9G17620 Aethionema arabicum HOM05D003643 ORTHO05D005001 1.9e-164 583.2 513 60.0
arahy.Tifrunner.gnm1.ann1.PVMC8E Arachis hypogaea HOM05D003643 ORTHO05D005001 3.2e-164 582.4 492 60.2
Mapoly0085s0072 Marchantia polymorpha HOM05D003643 ORTHO05D005001 4.2e-164 582.0 508 58.1
DCAR_007797 Daucus carota HOM05D003643 ORTHO05D005001 1.6e-163 580.1 484 61.0
AUR62010551 Chenopodium quinoa HOM05D003643 ORTHO05D005001 2.7e-163 579.3 485 60.4
ECA246G0187 Erigeron canadensis HOM05D003643 ORTHO05D005001 3.0e-162 575.9 474 60.5
Lj1g0023481 Lotus japonicus HOM05D003643 ORTHO05D005001 1.4e-159 567.0 492 59.3
unitig_32.g11672 Utricularia gibba HOM05D003643 ORTHO05D005001 2.4e-159 566.2 485 59.0
Hund14697 Selenicereus undatus HOM05D003643 ORTHO05D005001 4.5e-158 562.0 503 58.3
SGA_v2.0_scaffold95G28766 Striga asiatica HOM05D003643 ORTHO05D005001 1.0e-157 560.8 514 58.0
Oeu052674.3 Olea europaea HOM05D003643 ORTHO05D005001 8.5e-157 557.8 455 61.1
PSO017G1140 Papaver somniferum HOM05D003643 ORTHO05D005001 6.7e-154 548.1 396 71.2
arahy.Tifrunner.gnm1.ann1.EU78CH Arachis hypogaea HOM05D003643 ORTHO05D005001 7.4e-153 544.7 492 57.9
TPR.G20778 Trifolium pratense HOM05D003643 ORTHO05D005001 7.4e-153 544.7 479 57.2
Hund01937 Selenicereus undatus HOM05D003643 ORTHO05D005001 1.3e-152 543.9 490 58.2
AUR62017342 Chenopodium quinoa HOM05D003643 ORTHO05D005001 9.1e-151 537.7 587 50.6
Manes.01G122000 Manihot esculenta HOM05D003643 ORTHO05D005001 1.5e-150 537.0 493 58.4
Nitab4.5_0002463g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 2.0e-150 536.6 488 57.8
Peaxi162Scf00128g01142 Petunia axillaris HOM05D003643 ORTHO05D005001 2.2e-149 533.1 491 58.0
EL10Ac5g12673 Beta vulgaris HOM05D003643 ORTHO05D005001 4.2e-148 528.9 574 52.1
CSS0005005 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 7.2e-148 528.1 399 66.7
TPR.G9485 Trifolium pratense HOM05D003643 ORTHO05D005001 9.4e-148 527.7 468 57.3
SMO203G0021 Selaginella moellendorffii HOM05D003643 ORTHO05D005001 1.2e-147 527.3 451 57.9
Lsat_1_v5_gn_2_29841 Lactuca sativa HOM05D003643 ORTHO05D005001 2.1e-147 526.6 496 56.7
Ca_20206_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 2.6e-145 519.6 475 55.6
CBR_g6566 Chara braunii HOM05D003643 ORTHO05D005001 2.2e-141 506.5 531 51.6
CBR_g34896 Chara braunii HOM05D003643 ORTHO05D005001 1.4e-135 487.3 493 52.7
Nitab4.5_0004569g0010 Nicotiana tabacum HOM05D003643 ORTHO05D005001 2.6e-134 483.0 498 54.4
ClCG01G009340 Citrullus lanatus HOM05D003643 ORTHO05D005001 1.6e-126 457.2 358 66.2
Ciclev10003667m.g Citrus clementina HOM05D003643 ORTHO05D005001 8.0e-123 444.9 379 59.6
Phvul.002G099300 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.0e-121 440.3 386 60.4
QL07p008150 Quercus lobata HOM05D003643 ORTHO05D005001 3.7e-120 436.0 545 46.1
Gohir.1Z049309 Gossypium hirsutum HOM05D003643 ORTHO05D005001 4.8e-120 435.6 351 65.0
Ah.12g057940 Amaranthus hybridus HOM05D003643 ORTHO05D005001 2.1e-115 420.2 393 57.0
Phvul.003G000226 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 6.8e-114 415.2 348 61.2
BolC8t48076H Brassica oleracea HOM05D003643 ORTHO05D005001 1.3e-109 401.0 356 59.6
CBR_g6568 Chara braunii HOM05D003643 ORTHO05D005001 1.0e-106 391.3 468 47.0
Gohir.1Z049318 Gossypium hirsutum HOM05D003643 ORTHO05D005001 5.2e-106 389.0 299 64.5
C03p12370 Brassica napus HOM05D003643 ORTHO05D005001 1.1e-100 371.3 296 62.2
Peaxi162Scf00149g01022 Petunia axillaris HOM05D003643 ORTHO05D005001 4.3e-100 369.4 361 55.4
Phvul.003G000330 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.0e-97 360.5 272 65.4
Phvul.L001739 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.2e-95 353.2 396 51.3
Haze_13620 Corylus avellana HOM05D003643 ORTHO05D005001 8.6e-93 345.1 275 64.4
Phvul.003G000304 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 4.4e-89 332.8 280 60.7
Cfa025656 Carpinus fangiana HOM05D003643 ORTHO05D005001 1.3e-77 294.7 469 39.2
Phvul.003G000278 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.1e-67 260.8 192 66.7
Actinidia36045 Actinidia chinensis HOM05D003643 ORTHO05D005001 2.4e-66 257.3 236 57.2
Phvul.L008901 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.1e-59 234.2 169 68.6
SEGI_34727 Sequoiadendron giganteum HOM05D003643 ORTHO05D005001 6.2e-59 232.6 200 57.5
Atru.chr3.103 Acer truncatum HOM05D003643 ORTHO05D005001 3.4e-57 226.9 244 53.7
DCAR_017792 Daucus carota HOM05D003643 ORTHO05D005001 1.1e-52 211.8 204 56.9
BolC8t48075H Brassica oleracea HOM05D003643 ORTHO05D018815 2.8e-51 207.2 136 72.8
Psat6g162200 Pisum sativum HOM05D003643 ORTHO05D005001 4.9e-48 196.4 245 45.3
Psat3g171960 Pisum sativum HOM05D003643 ORTHO05D005001 1.2e-46 191.8 228 46.5
Lsat_1_v5_gn_5_36361 Lactuca sativa HOM05D003643 ORTHO05D018815 1.6e-46 191.4 134 67.2
ClCG01G009350 Citrullus lanatus HOM05D003643 ORTHO05D005001 4.8e-43 179.9 128 68.8
Peaxi162Scf00149g01017 Petunia axillaris HOM05D003643 ORTHO05D018815 7.6e-41 172.6 132 62.9
ATR0712G001 Amborella trichopoda HOM05D003643 ORTHO05D023464 2.3e-37 161.0 137 57.7
CSS0009011 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 9.1e-34 149.1 103 71.8
Atru.chr8.2585 Acer truncatum HOM05D003643 ORTHO05D005001 5.9e-33 146.4 153 54.2
Atru.chr8.2696 Acer truncatum HOM05D003643 ORTHO05D005001 2.9e-32 144.1 248 38.3
CBR_g12037 Chara braunii HOM05D003643 ORTHO05D005001 1.4e-31 141.7 205 42.0
Phvul.L001639 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 2.2e-27 127.9 98 61.2
Phvul.L008801 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 2.2e-27 127.9 98 61.2
CSS0015856 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 3.7e-27 127.1 103 64.1
Lsat_1_v5_gn_5_135000 Lactuca sativa HOM05D003643 ORTHO05D005001 6.5e-24 116.3 97 61.9
Haze_13621 Corylus avellana HOM05D003643 ORTHO05D018815 5.2e-21 106.7 66 74.2
Gohir.A10G145401 Gossypium hirsutum HOM05D003643 ORTHO05D018815 2.0e-20 104.8 64 76.6
ClCG01G009330 Citrullus lanatus HOM05D003643 ORTHO05D018815 4.4e-20 103.6 64 71.9
Cc11_g00920 Coffea canephora HOM05D003643 ORTHO05D005001 2.2e-19 101.3 67 74.6
CSS0023685 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 6.3e-19 99.8 71 66.2
Lsat_1_v5_gn_5_54460 Lactuca sativa HOM05D003643 ORTHO05D005001 1.4e-18 98.6 176 38.1
Psat0s3903g0040 Pisum sativum HOM05D003643 ORTHO05D005001 3.5e-17 94.0 65 72.3
CSS0030804 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 5.9e-17 93.2 65 66.2
CSS0024414 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 5.0e-16 90.1 65 63.1
CSS0049868 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.5e-15 88.6 65 61.5
CSS0012788 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 6.7e-13 79.7 77 53.2
CSS0032340 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 1.1e-10 72.4 46 65.2
Haze_13619 Corylus avellana HOM05D003643 ORTHO05D034905 4.1e-10 70.5 99 44.4


User provided reference genes

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