Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01507 Aquilegia oxysepala HOM05D005703 ORTHO05D006643 5.9e-178 627.5 330 100.0
Nn6g32200 Nelumbo nucifera HOM05D005703 ORTHO05D006643 7.1e-131 471.1 324 76.9
CiPaw.06G130900 Carya illinoinensis HOM05D005703 ORTHO05D006643 2.7e-130 469.2 310 78.7
QL11p045612 Quercus lobata HOM05D005703 ORTHO05D006643 1.5e-128 463.4 322 75.8
Potri.004G160800 Populus trichocarpa HOM05D005703 ORTHO05D006643 3.3e-128 462.2 309 79.0
PSO170G4951 Papaver somniferum HOM05D005703 ORTHO05D006643 7.3e-128 461.1 330 74.8
Hma1.2p1_0066F.1_g035910 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 1.6e-127 459.9 280 82.1
Atru.chr5.3109 Acer truncatum HOM05D005703 ORTHO05D006643 8.1e-127 457.6 320 75.6
GSVIVG01024205001 Vitis vinifera HOM05D005703 ORTHO05D006643 1.8e-126 456.4 315 77.1
RcHm_v2.0_Chr6g0266981 Rosa chinensis HOM05D005703 ORTHO05D006643 2.6e-125 452.6 311 76.2
TWI31G0330 Tripterygium wilfordii HOM05D005703 ORTHO05D006643 2.6e-125 452.6 289 81.0
CsaV3_7G000370 Cucumis sativus L. HOM05D005703 ORTHO05D006643 7.6e-125 451.1 320 74.4
Manes.11G087800 Manihot esculenta HOM05D005703 ORTHO05D006643 1.7e-124 449.9 334 72.5
MELO3C002791.2 Cucumis melo HOM05D005703 ORTHO05D006643 2.9e-124 449.1 323 73.7
FvH4_2g10050 Fragaria vesca HOM05D005703 ORTHO05D006643 4.9e-124 448.4 311 75.6
MD10G1066100 Malus domestica HOM05D005703 ORTHO05D006643 4.9e-124 448.4 310 75.5
Cpa.g.sc150.43 Carica papaya HOM05D005703 ORTHO05D006643 1.1e-123 447.2 340 72.1
Sabra04G0107600 Salix brachista HOM05D005703 ORTHO05D006643 1.1e-123 447.2 280 82.1
Actinidia27862 Actinidia chinensis HOM05D005703 ORTHO05D006643 7.1e-123 444.5 306 75.8
MSTRG.20056 Avicennia marina HOM05D005703 ORTHO05D006643 7.1e-123 444.5 321 73.8
CSS0001334 Camellia sinensis var. sinensis HOM05D005703 ORTHO05D006643 7.1e-123 444.5 278 82.4
Actinidia02238 Actinidia chinensis HOM05D005703 ORTHO05D006643 1.6e-122 443.4 308 75.6
Eucgr.D00178 Eucalyptus grandis HOM05D005703 ORTHO05D006643 1.6e-122 443.4 278 80.9
ATR0661G148 Amborella trichopoda HOM05D005703 ORTHO05D006643 7.8e-122 441.0 299 76.3
Gohir.D12G030600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 5.1e-121 438.3 315 71.4
Solyc01g110160.4 Solanum lycopersicum HOM05D005703 ORTHO05D006643 1.5e-120 436.8 278 79.9
Sopen01g052320 Solanum pennellii HOM05D005703 ORTHO05D006643 1.5e-120 436.8 278 79.9
Thecc.02G078100 Theobroma cacao HOM05D005703 ORTHO05D006643 4.3e-120 435.3 324 70.7
Gorai.008G031500 Gossypium raimondii HOM05D005703 ORTHO05D006643 7.3e-120 434.5 315 70.5
Lj3g0017018 Lotus japonicus HOM05D005703 ORTHO05D006643 2.8e-119 432.6 281 75.8
VMungo1127G0812 Vigna mungo HOM05D005703 ORTHO05D006643 6.9e-118 427.9 283 75.3
PGSC0003DMG400030971 Solanum tuberosum HOM05D005703 ORTHO05D006643 9.0e-118 427.6 329 70.5
Glyma.11G112900 Glycine max HOM05D005703 ORTHO05D006643 3.4e-117 425.6 294 73.1
Prupe.8G088000 Prunus persica HOM05D005703 ORTHO05D006643 3.4e-117 425.6 315 73.0
COL.COLO4_26014 Corchorus olitorius HOM05D005703 ORTHO05D006643 4.4e-117 425.2 291 74.6
Lalb_Chr03g0025421 Lupinus albus HOM05D005703 ORTHO05D006643 5.8e-117 424.9 281 75.4
Ciclev10028680m.g Citrus clementina HOM05D005703 ORTHO05D006643 9.9e-117 424.1 330 69.7
Migut.B00193 Erythranthe guttata HOM05D005703 ORTHO05D006643 3.8e-116 422.2 275 78.5
Ca_20918_v3 Cicer arietinum L. HOM05D005703 ORTHO05D006643 6.4e-116 421.4 281 75.4
THA.LOC104824803 Tarenaya hassleriana HOM05D005703 ORTHO05D006643 6.4e-116 421.4 333 65.8
Peaxi162Scf00016g00231 Petunia axillaris HOM05D005703 ORTHO05D006643 1.9e-115 419.9 292 75.3
HanXRQChr12g0373591 Helianthus annuus HOM05D005703 ORTHO05D006643 5.4e-115 418.3 321 68.5
Rhsim05G0069500 Rhododendron simsii HOM05D005703 ORTHO05D006643 1.2e-114 417.2 282 74.5
FAN15G0097 Fragaria x ananassa HOM05D005703 ORTHO05D006643 2.7e-114 416.0 364 64.0
Glyma.12G038800 Glycine max HOM05D005703 ORTHO05D006643 3.5e-114 415.6 283 72.8
Sc14g0002020 Simmondsia chinensis HOM05D005703 ORTHO05D006643 6.0e-114 414.8 330 68.8
Aa31LG7G15130 Aethionema arabicum HOM05D005703 ORTHO05D001153 7.8e-114 414.5 330 66.4
CARHR112270 Cardamine hirsuta HOM05D005703 ORTHO05D006643 1.0e-113 414.1 333 64.6
HPP92_025877 Vanilla planifolia HOM05D005703 ORTHO05D006643 1.7e-113 413.3 286 73.1
TPR.G16235 Trifolium pratense HOM05D005703 ORTHO05D006643 3.0e-113 412.5 324 67.9
AL4G10560 Arabidopsis lyrata HOM05D005703 ORTHO05D006643 1.9e-112 409.8 278 72.7
AT2G21385 Arabidopsis thaliana HOM05D005703 ORTHO05D006643 1.9e-112 409.8 278 72.3
arahy.Tifrunner.gnm1.ann1.YBLQ63 Arachis hypogaea HOM05D005703 ORTHO05D006643 1.9e-112 409.8 290 72.1
Lsat_1_v5_gn_5_125081 Lactuca sativa HOM05D005703 ORTHO05D006643 3.3e-112 409.1 358 63.4
Medtr4g071190 Medicago truncatula HOM05D005703 ORTHO05D006643 3.3e-112 409.1 283 72.4
Sp4g00560 Schrenkiella parvula HOM05D005703 ORTHO05D006643 9.6e-112 407.5 332 65.1
Carub.0004s0043 Capsella rubella HOM05D005703 ORTHO05D006643 2.1e-111 406.4 277 72.6
Os09g0531100 Oryza sativa ssp. japonica HOM05D005703 ORTHO05D006643 8.1e-111 404.4 277 72.6
AUR62010417 Chenopodium quinoa HOM05D005703 ORTHO05D006643 4.0e-110 402.1 307 71.3
ECA234G1754 Erigeron canadensis HOM05D005703 ORTHO05D006643 4.0e-110 402.1 328 65.5
Psat7g139960 Pisum sativum HOM05D005703 ORTHO05D006643 1.5e-109 400.2 287 73.9
AUR62016798 Chenopodium quinoa HOM05D005703 ORTHO05D006643 2.0e-109 399.8 322 67.7
Phvul.011G040900 Phaseolus vulgaris HOM05D005703 ORTHO05D006643 1.1e-107 394.0 259 74.5
CDE09G1081 Ceratophyllum demersum HOM05D005703 ORTHO05D006643 2.4e-107 392.9 316 65.8
Dinv23475 Davidia involucrata HOM05D005703 ORTHO05D006643 9.3e-107 391.0 280 75.0
C08p41580 Brassica napus HOM05D005703 ORTHO05D006643 2.1e-106 389.8 331 63.1
BraA09t41216Z Brassica rapa HOM05D005703 ORTHO05D006643 2.1e-106 389.8 280 71.1
A09p58290 Brassica napus HOM05D005703 ORTHO05D006643 6.0e-106 388.3 279 71.0
BolC8t51720H Brassica oleracea HOM05D005703 ORTHO05D006643 6.0e-106 388.3 332 63.0
Haze_02308 Corylus avellana HOM05D005703 ORTHO05D006643 6.0e-106 388.3 310 68.1
Nitab4.5_0011132g0020 Nicotiana tabacum HOM05D005703 ORTHO05D006643 1.9e-104 383.3 287 70.7
Hma1.2p1_0066F.1_g035920 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 7.4e-104 381.3 277 71.8
Zm00001eb353590 Zea mays HOM05D005703 ORTHO05D006643 9.6e-104 380.9 326 62.6
SGA_v2.0_scaffold58G20483 Striga asiatica HOM05D005703 ORTHO05D006643 4.8e-103 378.6 281 72.6
Thhalv10000241m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 1.7e-100 370.2 251 72.9
SalBow6G5125 Salvia bowleyana HOM05D005703 ORTHO05D006643 2.9e-100 369.4 326 63.8
arahy.Tifrunner.gnm1.ann1.R55P3J Arachis hypogaea HOM05D005703 ORTHO05D006643 1.4e-99 367.1 263 72.2
MELO3C013421.2 Cucumis melo HOM05D005703 ORTHO05D006643 3.2e-99 365.9 320 64.7
ClCG02G004580 Citrullus lanatus HOM05D005703 ORTHO05D006643 5.5e-99 365.2 311 65.9
DCAR_022931 Daucus carota HOM05D005703 ORTHO05D006643 3.1e-94 349.4 279 65.9
EL10Ac9g21670 Beta vulgaris HOM05D005703 ORTHO05D006643 1.0e-92 344.4 352 57.7
Sed0007704 Sechium edule HOM05D005703 ORTHO05D006643 3.2e-91 339.3 241 73.4
Nitab4.5_0002723g0090 Nicotiana tabacum HOM05D005703 ORTHO05D006643 2.3e-89 333.2 276 66.3
vmacro17444 Vaccinium macrocarpon HOM05D005703 ORTHO05D006643 8.7e-89 331.3 326 58.3
CANSAT11G2682 Cannabis sativa HOM05D005703 ORTHO05D006643 1.1e-88 330.9 308 63.0
FAN20G2472 Fragaria x ananassa HOM05D005703 ORTHO05D006643 7.4e-88 328.2 323 57.6
FAN24G3327 Fragaria x ananassa HOM05D005703 ORTHO05D006643 9.7e-88 327.8 311 59.8
FAN27G2042 Fragaria x ananassa HOM05D005703 ORTHO05D006643 9.7e-88 327.8 311 59.5
Hund00227 Selenicereus undatus HOM05D005703 ORTHO05D006643 6.9e-86 321.6 321 58.6
Lj5C191G8 Lonicera japonica HOM05D005703 ORTHO05D006643 2.6e-85 319.7 309 61.8
Cfa005074 Carpinus fangiana HOM05D005703 ORTHO05D006643 4.5e-85 318.9 234 73.5
Cc02_g17090 Coffea canephora HOM05D005703 ORTHO05D006643 1.6e-82 310.5 197 79.7
Mapoly0084s0041 Marchantia polymorpha HOM05D005703 ORTHO05D006643 2.5e-80 303.1 301 54.2
Pp3c22_4620 Physcomitrium patens HOM05D005703 ORTHO05D006643 2.4e-78 296.6 316 50.3
unitig_0.g54 Utricularia gibba HOM05D005703 ORTHO05D006643 2.0e-77 293.5 201 73.6
SMO356G0671 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 1.3e-71 274.2 275 52.0
SMO290G0004 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 9.1e-70 268.1 275 52.0
SMO290G0013 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 2.0e-69 266.9 252 54.8
BcaB06g27102 Brassica carinata HOM05D005703 ORTHO05D006643 5.9e-69 265.4 260 57.7
Gohir.A12G041600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 3.9e-65 252.7 166 76.5
SMO356G0278 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 2.6e-64 250.0 252 52.8
BraA01t01909Z Brassica rapa HOM05D005703 ORTHO05D006643 1.8e-62 243.8 207 64.3
AagrBONN_evm.TU.Sc2ySwM_228.378 Anthoceros agrestis HOM05D005703 ORTHO05D006643 1.7e-60 237.3 198 61.1
Duzib132G0736 Durio zibethinus HOM05D005703 ORTHO05D006643 1.1e-59 234.6 344 44.2
Thhalv10005656m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 4.1e-54 216.1 159 67.9
TAR381G0871 Trochodendron aralioides HOM05D005703 ORTHO05D006643 3.5e-45 186.4 136 70.6
MBI01_g29867_MAGBIO Magnolia biondii HOM05D005703 ORTHO05D006643 2.9e-44 183.3 114 79.8
BolC1t00937H Brassica oleracea HOM05D005703 ORTHO05D006643 1.9e-43 180.6 144 68.1
C01p09750 Brassica napus HOM05D005703 ORTHO05D006643 2.2e-39 167.2 186 54.3
BolC4t23697H Brassica oleracea HOM05D005703 ORTHO05D006643 5.0e-36 156.0 188 50.5
BolC2t11489H Brassica oleracea HOM05D005703 ORTHO05D006643 4.3e-35 152.9 186 48.9
C04p21760 Brassica napus HOM05D005703 ORTHO05D006643 5.2e-33 146.0 212 45.8
C09p55850 Brassica napus HOM05D005703 ORTHO05D006643 6.8e-33 145.6 214 46.3
BcaC04g19425 Brassica carinata HOM05D005703 ORTHO05D006643 1.2e-32 144.8 225 44.9
CBR_g49480 Chara braunii HOM05D005703 ORTHO05D006643 4.9e-31 139.4 246 35.4
Potri.009G121902 Populus trichocarpa HOM05D005703 ORTHO05D006643 6.0e-29 132.5 104 66.3
C02p54250 Brassica napus HOM05D005703 ORTHO05D006643 5.6e-27 125.9 212 41.5
HanXRQChr14g0433731 Helianthus annuus HOM05D005703 ORTHO05D006643 9.5e-27 125.2 79 83.5
QL11p045593 Quercus lobata HOM05D005703 ORTHO05D006643 9.5e-27 125.2 72 80.6
Cre08.g372000 Chlamydomonas reinhardtii HOM05D005703 ORTHO05D006643 1.3e-23 114.8 286 30.4
BcaC01g06448 Brassica carinata HOM05D005703 ORTHO05D006643 2.2e-23 114.0 137 50.4
Cc02_g17080 Coffea canephora HOM05D005703 ORTHO05D006643 2.9e-23 113.6 87 69.0
QL11p045598 Quercus lobata HOM05D005703 ORTHO05D006643 4.9e-23 112.8 75 74.7
SEGI_33335 Sequoiadendron giganteum HOM05D005703 ORTHO05D006643 1.0e-20 105.1 93 57.0
unitig_0.g53 Utricularia gibba HOM05D005703 ORTHO05D006643 1.3e-20 104.8 71 73.2
PRCOL_00000952 Prasinoderma coloniale HOM05D005703 ORTHO05D006643 3.0e-20 103.6 232 28.9
MBI01_g29866_MAGBIO Magnolia biondii HOM05D005703 ORTHO05D006643 1.5e-19 101.3 66 72.7
C03p56750 Brassica napus HOM05D005703 ORTHO05D006643 1.2e-16 91.7 128 43.0
C03p15450 Brassica napus HOM05D005703 ORTHO05D006643 1.3e-15 88.2 151 39.1
BcaC09g52221 Brassica carinata HOM05D005703 ORTHO05D006643 7.1e-14 82.4 61 68.9
TAR381G1022 Trochodendron aralioides HOM05D005703 ORTHO05D006643 6.0e-13 79.3 83 56.6
C03p56740 Brassica napus HOM05D005703 ORTHO05D006643 5.1e-12 76.3 78 52.6
BolC1t00936H Brassica oleracea HOM05D005703 ORTHO05D006643 6.6e-12 75.9 61 63.9
Lsat_1_v5_gn_1_61800 Lactuca sativa HOM05D005428 ORTHO05D002547 8.1e-10 68.9 57 64.9
Oeu037764.1 Olea europaea HOM05D005703 ORTHO05D006643 8.9e-09 65.5 34 91.2
Aqoxy7G02439 Aquilegia oxysepala HOM05D001702 ORTHO05D006643 2.9e-07 60.5 36 75.0
CAN.G878.5 Capsicum annuum HOM05D000269 ORTHO05D000216 8.4e-07 58.9 72 44.4
AUR62033094 Chenopodium quinoa HOM05D005703 ORTHO05D006643 1.4e-06 58.2 157 33.1
MCO02G267 Micromonas commoda HOM05D005703 ORTHO05D006643 2.4e-06 57.4 142 30.3


User provided reference genes

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