Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 0.0e+00 1100.1 539 100.0
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 1.6e-212 743.0 541 67.1
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 4.4e-207 724.9 539 66.0
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 2.4e-200 702.6 539 59.9
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 5.8e-199 698.0 540 61.3
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 1.4e-197 693.3 542 62.9
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 3.2e-197 692.2 542 62.5
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 1.6e-196 689.9 539 61.4
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 2.7e-196 689.1 540 59.4
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 1.9e-194 682.9 567 57.7
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 1.6e-193 679.9 542 60.5
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 4.0e-192 675.2 540 59.3
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 9.0e-192 674.1 540 59.8
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 2.0e-191 672.9 540 59.1
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 1.7e-190 669.8 540 59.3
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 2.7e-188 662.5 540 58.1
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 3.9e-187 658.7 542 59.4
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 2.5e-186 656.0 540 57.8
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 2.5e-186 656.0 540 59.3
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 1.3e-185 653.7 540 57.6
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 1.3e-185 653.7 548 59.7
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 6.2e-185 651.4 548 59.5
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 6.2e-185 651.4 542 58.9
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 3.1e-184 649.0 540 57.0
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 4.5e-183 645.2 543 57.8
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 2.9e-182 642.5 540 57.4
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 3.8e-182 642.1 542 56.6
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 4.9e-182 641.7 544 60.1
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 1.4e-181 640.2 540 57.6
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 1.6e-180 636.7 539 58.1
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 4.6e-180 635.2 543 56.9
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 4.6e-180 635.2 544 56.8
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 6.0e-180 634.8 562 55.5
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 2.3e-179 632.9 542 56.1
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 1.1e-178 630.6 540 55.2
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 2.5e-178 629.4 541 56.2
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 2.1e-177 626.3 540 55.2
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 6.2e-177 624.8 542 56.1
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 8.2e-177 624.4 542 55.9
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 1.8e-176 623.2 540 55.4
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 1.8e-176 623.2 547 55.2
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 5.3e-176 621.7 541 55.1
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 2.6e-175 619.4 540 55.0
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 3.4e-175 619.0 543 54.1
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 1.0e-174 617.5 540 54.8
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 1.7e-174 616.7 543 53.6
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 1.7e-174 616.7 542 53.7
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 1.7e-174 616.7 541 54.7
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 4.9e-174 615.1 543 53.4
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 4.9e-174 615.1 540 56.3
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 8.4e-174 614.4 540 54.1
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 1.4e-173 613.6 540 54.1
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.4e-173 613.6 540 53.9
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 2.5e-173 612.8 542 53.5
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 2.5e-173 612.8 539 56.0
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 4.2e-173 612.1 540 55.7
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 4.2e-173 612.1 540 56.3
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 5.5e-173 611.7 541 56.7
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 7.1e-173 611.3 542 53.5
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 7.1e-173 611.3 541 54.9
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 9.3e-173 610.9 540 56.1
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 5.1e-171 605.1 542 53.3
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 5.1e-171 605.1 542 53.3
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 5.1e-171 605.1 545 55.0
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 8.7e-171 604.4 540 54.1
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 3.3e-170 602.4 540 53.7
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 7.4e-170 601.3 539 55.3
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 7.4e-170 601.3 540 54.4
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 4.1e-168 595.5 542 52.6
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 5.3e-168 595.1 574 50.9
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 5.3e-168 595.1 601 51.2
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 1.2e-167 594.0 536 55.8
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.5e-167 593.6 540 53.7
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 2.0e-167 593.2 539 55.3
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 7.7e-167 591.3 540 51.3
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 1.8e-163 580.1 471 59.2
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 1.5e-162 577.0 543 50.5
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 5.7e-162 575.1 491 55.8
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 1.3e-161 573.9 538 52.8
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 6.3e-161 571.6 540 50.9
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 1.8e-160 570.1 541 50.6
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 3.4e-159 565.8 489 56.2
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 1.1e-157 560.8 469 58.0
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 3.0e-155 552.7 540 50.6
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 8.8e-155 551.2 633 46.1
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 1.1e-152 544.3 595 48.4
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 4.1e-152 542.3 433 61.0
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 3.8e-150 535.8 542 48.9
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.4e-147 527.3 460 52.0
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 1.4e-147 527.3 543 49.2
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 2.3e-147 526.6 539 50.5
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 2.6e-146 523.1 559 49.6
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 4.4e-146 522.3 552 48.7
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 1.7e-145 520.4 465 53.5
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 8.2e-145 518.1 446 57.0
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 4.7e-132 475.7 561 47.6
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 2.8e-129 466.5 552 45.3
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 8.3e-121 438.3 477 46.8
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 5.8e-114 415.6 312 63.1
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 4.0e-107 392.9 403 47.6
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.1e-91 341.7 563 34.8
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 5.2e-91 339.3 558 36.4
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 2.2e-89 334.0 575 36.7
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.3e-86 324.7 572 38.3
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.5e-85 321.2 565 38.1
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 2.7e-79 300.4 471 38.4
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 6.0e-71 272.7 223 58.3
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 1.0e-62 245.4 206 56.3
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 8.2e-52 209.1 249 43.0
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.7e-49 201.4 174 59.2
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 1.8e-38 164.9 109 68.8
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 3.5e-26 124.0 197 37.6
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 7.2e-24 116.3 124 44.4
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.2e-23 115.5 76 71.1
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 4.0e-22 110.5 116 45.7
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 7.7e-18 96.3 118 49.2
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 1.7e-17 95.1 58 69.0
Phvul.001G193600 Phaseolus vulgaris HOM05D006431 ORTHO05D007918 7.2e-08 63.2 203 24.6
Glyma.03G199700 Glycine max HOM05D006431 ORTHO05D007918 9.5e-08 62.8 203 24.6
Glyma.19G197300 Glycine max HOM05D006431 ORTHO05D007918 1.2e-07 62.4 203 24.6
MBI06_g37498_MAGBIO Magnolia biondii HOM05D002910 ORTHO05D030039 1.2e-07 62.4 85 40.0
ATR0370G001 Amborella trichopoda HOM05D006698 ORTHO05D008415 1.6e-07 62.0 51 60.8
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 1.6e-07 62.0 57 50.9
Aqoxy2G01023 Aquilegia oxysepala HOM05D006431 ORTHO05D007918 4.0e-06 57.4 207 25.6


User provided reference genes

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