Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 3.4e-113 411.8 220 100.0
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 3.1e-66 255.8 219 67.1
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 9.0e-66 254.2 212 70.8
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 1.5e-65 253.4 214 68.2
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 3.4e-65 252.3 187 76.5
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 2.2e-64 249.6 215 69.8
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 2.9e-64 249.2 193 74.6
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 1.1e-63 247.3 208 70.2
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 1.4e-63 246.9 192 74.5
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 2.5e-63 246.1 187 74.9
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 2.5e-63 246.1 187 74.9
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 2.5e-63 246.1 193 73.1
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 3.2e-63 245.7 177 77.4
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 7.2e-63 244.6 184 73.9
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 1.2e-62 243.8 214 66.4
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 1.6e-62 243.4 179 78.8
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 2.1e-62 243.0 213 69.0
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 2.7e-62 242.7 179 78.8
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 4.6e-62 241.9 170 80.6
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 7.9e-62 241.1 167 80.8
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 1.0e-61 240.7 179 77.1
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 1.4e-61 240.4 171 80.1
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 1.4e-61 240.4 171 79.5
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 2.3e-61 239.6 171 77.2
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 3.0e-61 239.2 219 65.8
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 5.1e-61 238.4 219 64.4
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 1.1e-60 237.3 217 64.5
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 1.5e-60 236.9 213 68.5
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 2.6e-60 236.1 196 69.9
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 2.6e-60 236.1 219 64.4
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 4.4e-60 235.3 219 65.3
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 5.7e-60 235.0 219 64.4
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 7.4e-60 234.6 222 64.0
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 9.7e-60 234.2 223 62.3
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 9.7e-60 234.2 217 64.1
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 1.7e-59 233.4 220 65.9
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 2.8e-59 232.6 217 64.5
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 2.8e-59 232.6 221 62.9
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 2.8e-59 232.6 171 77.2
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 2.8e-59 232.6 167 79.6
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 2.8e-59 232.6 169 76.3
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 4.8e-59 231.9 223 61.9
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 8.2e-59 231.1 216 64.8
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 8.2e-59 231.1 216 64.4
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 1.1e-58 230.7 170 77.1
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 1.4e-58 230.3 176 73.9
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 1.8e-58 229.9 170 75.3
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 1.8e-58 229.9 169 75.7
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 2.4e-58 229.6 171 76.6
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 2.4e-58 229.6 191 70.2
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 2.4e-58 229.6 171 75.4
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 3.1e-58 229.2 172 75.6
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 3.1e-58 229.2 217 64.5
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 3.1e-58 229.2 217 63.6
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 5.3e-58 228.4 214 62.1
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 5.3e-58 228.4 214 62.1
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 2.0e-57 226.5 211 62.1
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 3.4e-57 225.7 162 75.9
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 3.4e-57 225.7 189 66.7
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 1.0e-56 224.2 167 75.4
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 1.7e-56 223.4 232 60.3
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 2.2e-56 223.0 175 74.3
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 2.9e-56 222.6 189 69.3
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 5.0e-56 221.9 175 73.1
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 5.0e-56 221.9 202 66.8
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 6.5e-56 221.5 222 62.6
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 6.5e-56 221.5 173 74.0
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 1.1e-55 220.7 204 64.2
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 3.2e-55 219.2 222 59.9
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 3.2e-55 219.2 170 73.5
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 7.2e-55 218.0 202 66.3
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 1.2e-54 217.2 169 71.6
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 2.7e-54 216.1 221 58.8
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 2.7e-54 216.1 181 67.4
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 2.7e-54 216.1 175 66.9
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 6.1e-54 214.9 187 67.9
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 6.1e-54 214.9 171 73.7
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 7.9e-54 214.5 176 71.6
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 7.9e-54 214.5 180 68.3
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 1.4e-53 213.8 176 72.2
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 1.8e-53 213.4 159 76.7
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 5.2e-53 211.8 192 67.2
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 1.1e-52 210.7 165 69.1
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 2.0e-52 209.9 187 67.4
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 2.6e-52 209.5 124 87.1
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 4.4e-52 208.8 174 69.0
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 7.4e-52 208.0 173 68.8
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 1.7e-51 206.8 181 66.3
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 2.8e-51 206.1 170 69.4
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 2.4e-50 203.0 182 64.8
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 3.1e-50 202.6 173 66.5
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 5.3e-50 201.8 123 87.0
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 7.0e-50 201.4 171 68.4
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 1.6e-49 200.3 147 76.2
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 3.5e-49 199.1 175 67.4
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 2.2e-48 196.4 122 81.1
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 2.2e-48 196.4 122 81.1
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 6.5e-48 194.9 164 68.3
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 1.5e-47 193.7 121 81.8
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 3.0e-45 186.0 148 73.0
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 5.2e-45 185.3 233 54.9
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 2.2e-43 179.9 181 58.6
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 3.7e-43 179.1 158 70.3
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 4.8e-43 178.7 315 45.1
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 7.0e-42 174.9 160 58.1
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 2.7e-41 172.9 142 63.4
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 7.7e-41 171.4 156 58.3
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 1.7e-40 170.2 143 61.5
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 1.4e-37 160.6 148 62.8
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 6.1e-30 135.2 173 47.4
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 1.5e-28 130.6 109 69.7
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 1.7e-27 127.1 167 52.1
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 1.4e-26 124.0 118 61.9
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 1.0e-24 117.9 170 43.5
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 1.3e-24 117.5 98 60.2
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 3.3e-23 112.8 98 68.4
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 5.2e-21 105.5 81 74.1
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 8.9e-21 104.8 144 41.0
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 1.3e-19 100.9 89 64.0
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 3.9e-16 89.4 71 70.4
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 2.6e-12 76.6 147 42.9


User provided reference genes

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