Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 2.8e-134 481.9 234 100.0
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 8.1e-89 330.9 178 86.5
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 1.4e-88 330.1 169 88.8
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 3.4e-87 325.5 177 81.9
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 4.4e-87 325.1 177 81.9
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 3.8e-86 322.0 190 78.4
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 4.9e-86 321.6 180 83.3
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 4.9e-86 321.6 170 87.1
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 6.4e-86 321.2 176 83.5
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 2.4e-85 319.3 163 87.7
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 3.2e-85 318.9 168 88.1
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 3.2e-85 318.9 189 78.8
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 4.2e-85 318.5 170 87.6
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 4.2e-85 318.5 182 83.0
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 5.4e-85 318.2 206 76.7
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 5.4e-85 318.2 170 86.5
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 5.4e-85 318.2 161 88.8
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 9.3e-85 317.4 186 79.6
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 1.6e-84 316.6 165 89.1
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 2.1e-84 316.2 207 74.4
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 3.5e-84 315.5 171 84.8
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 3.5e-84 315.5 190 78.4
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 3.5e-84 315.5 171 86.0
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 4.6e-84 315.1 172 84.3
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 6.0e-84 314.7 173 82.7
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 7.8e-84 314.3 198 76.3
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 7.8e-84 314.3 170 84.7
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 1.0e-83 313.9 193 74.6
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 1.0e-83 313.9 173 82.7
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 1.7e-83 313.2 170 85.3
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 2.3e-83 312.8 171 84.2
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 3.0e-83 312.4 176 83.0
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 5.1e-83 311.6 185 80.0
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 5.1e-83 311.6 188 75.0
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 5.1e-83 311.6 170 84.1
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 5.1e-83 311.6 170 83.5
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 8.7e-83 310.8 169 83.4
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 1.1e-82 310.5 187 74.9
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 1.1e-82 310.5 175 81.1
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 1.5e-82 310.1 172 83.1
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 1.5e-82 310.1 206 71.4
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 1.5e-82 310.1 177 80.8
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 1.9e-82 309.7 163 87.7
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 1.9e-82 309.7 163 87.7
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 1.9e-82 309.7 173 82.1
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 1.9e-82 309.7 173 82.1
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 1.9e-82 309.7 173 82.1
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 1.9e-82 309.7 178 80.3
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 2.5e-82 309.3 171 81.9
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 2.5e-82 309.3 169 84.0
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 3.3e-82 308.9 162 86.4
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 3.3e-82 308.9 168 85.1
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 4.3e-82 308.5 204 72.5
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 5.6e-82 308.1 239 65.7
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 7.3e-82 307.8 190 76.8
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 7.3e-82 307.8 170 81.8
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 7.3e-82 307.8 176 79.5
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 9.6e-82 307.4 171 82.5
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 1.3e-81 307.0 192 75.5
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 2.1e-81 306.2 204 73.0
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 2.8e-81 305.8 164 82.9
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 8.1e-81 304.3 156 87.8
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 1.1e-80 303.9 163 84.7
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 1.1e-80 303.9 174 79.9
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 3.1e-80 302.4 166 85.5
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 3.1e-80 302.4 165 83.0
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 1.5e-79 300.1 166 81.9
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 2.6e-79 299.3 220 67.3
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 5.8e-79 298.1 177 79.1
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 9.9e-79 297.4 176 78.4
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 2.9e-78 295.8 167 80.2
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 3.8e-78 295.4 203 71.4
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 6.4e-78 294.7 172 79.7
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 8.4e-78 294.3 178 75.8
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 8.4e-78 294.3 177 79.1
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 1.9e-77 293.1 178 75.3
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 1.9e-77 293.1 189 73.0
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 3.2e-77 292.4 173 76.3
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 4.2e-77 292.0 165 80.0
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 4.2e-77 292.0 165 80.0
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 4.2e-77 292.0 165 80.0
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 5.4e-77 291.6 185 77.8
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 5.4e-77 291.6 165 79.4
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 5.4e-77 291.6 165 79.4
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 5.4e-77 291.6 165 79.4
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 1.6e-76 290.0 178 73.6
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 6.0e-76 288.1 162 83.3
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 1.5e-74 283.5 161 81.4
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 5.6e-74 281.6 150 86.7
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 1.6e-73 280.0 190 73.2
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 2.1e-73 279.6 157 84.1
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 5.3e-72 275.0 193 71.5
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 2.7e-68 262.7 154 79.9
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 6.7e-67 258.1 190 63.7
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 3.3e-66 255.8 209 61.2
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 1.1e-61 240.7 129 82.9
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 9.3e-61 237.7 128 84.4
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 4.6e-60 235.3 139 77.0
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 3.1e-56 222.6 155 63.2
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 5.3e-56 221.9 132 79.5
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 3.8e-54 215.7 173 62.4
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 1.6e-52 210.3 110 85.5
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 6.3e-49 198.4 134 66.4
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 8.8e-43 177.9 130 63.8
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 7.4e-42 174.9 162 56.8
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 2.6e-34 149.8 207 40.6
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 4.5e-31 139.0 89 74.2
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 2.7e-28 129.8 172 44.8
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 5.9e-15 85.5 42 90.5
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 2.5e-13 80.1 47 74.5
A10p15960 Brassica napus HOM05D007102 ORTHO05D008950 4.1e-08 62.8 59 55.9


User provided reference genes

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