Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01405 Aquilegia oxysepala HOM05D007087 ORTHO05D008968 3.4e-40 167.9 88 100.0
COL.COLO4_11683 Corchorus olitorius HOM05D007087 ORTHO05D008968 4.3e-35 151.0 88 90.9
Gohir.A11G208700 Gossypium hirsutum HOM05D007087 ORTHO05D008968 5.6e-35 150.6 88 90.9
Gohir.D11G214800 Gossypium hirsutum HOM05D007087 ORTHO05D008968 5.6e-35 150.6 88 90.9
PGR102G1803 Punica granatum HOM05D007087 ORTHO05D008968 5.6e-35 150.6 88 90.9
CSS0037594 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 9.6e-35 149.8 88 89.8
CSS0044951 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 9.6e-35 149.8 88 89.8
BcaC02g08628 Brassica carinata HOM05D007087 ORTHO05D008968 2.1e-34 148.7 88 88.6
A04p17120 Brassica napus HOM05D007087 ORTHO05D008968 2.1e-34 148.7 88 88.6
C04p51930 Brassica napus HOM05D007087 ORTHO05D008968 2.1e-34 148.7 88 88.6
BolC4t26765H Brassica oleracea HOM05D007087 ORTHO05D008968 2.1e-34 148.7 88 88.6
BraA04t17341Z Brassica rapa HOM05D007087 ORTHO05D008968 2.1e-34 148.7 88 88.6
TAR376G1208 Trochodendron aralioides HOM05D007087 ORTHO05D008968 2.1e-34 148.7 85 92.9
Gorai.007G230500 Gossypium raimondii HOM05D007087 ORTHO05D008968 2.8e-34 148.3 86 90.7
QL06p037367 Quercus lobata HOM05D007087 ORTHO05D008968 2.8e-34 148.3 87 89.7
Sc16g0000740 Simmondsia chinensis HOM05D007087 ORTHO05D008968 2.8e-34 148.3 85 90.6
Dinv27003 Davidia involucrata HOM05D007087 ORTHO05D008968 3.7e-34 147.9 88 87.5
Duzib264G0202 Durio zibethinus HOM05D007087 ORTHO05D008968 3.7e-34 147.9 85 91.8
PSO017G4672 Papaver somniferum HOM05D007087 ORTHO05D008968 3.7e-34 147.9 85 87.1
PSO478G0358 Papaver somniferum HOM05D007087 ORTHO05D008968 3.7e-34 147.9 85 87.1
Thecc.01G084300 Theobroma cacao HOM05D007087 ORTHO05D008968 3.7e-34 147.9 88 89.8
Actinidia16395 Actinidia chinensis HOM05D007087 ORTHO05D008968 4.8e-34 147.5 88 87.5
Cfa006833 Carpinus fangiana HOM05D007087 ORTHO05D008968 4.8e-34 147.5 88 88.6
Hma1.2p1_0080F.1_g042080 Hydrangea macrophylla HOM05D007087 ORTHO05D008968 4.8e-34 147.5 88 88.6
Ciclev10027006m.g Citrus clementina HOM05D007087 ORTHO05D008968 6.2e-34 147.1 88 89.8
TWI77G0839 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 6.2e-34 147.1 85 90.6
TWI53G1267 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 8.1e-34 146.7 88 89.8
arahy.Tifrunner.gnm1.ann1.6G1T2R Arachis hypogaea HOM05D007087 ORTHO05D008968 1.1e-33 146.4 88 88.6
arahy.Tifrunner.gnm1.ann1.NU08EI Arachis hypogaea HOM05D007087 ORTHO05D008968 1.1e-33 146.4 88 88.6
Eucgr.I00598 Eucalyptus grandis HOM05D007087 ORTHO05D008968 1.1e-33 146.4 88 87.5
Eucgr.I00599 Eucalyptus grandis HOM05D007087 ORTHO05D008968 1.1e-33 146.4 88 87.5
vmacro18037 Vaccinium macrocarpon HOM05D007087 ORTHO05D008968 1.1e-33 146.4 88 86.4
AL4G12190 Arabidopsis lyrata HOM05D007087 ORTHO05D008968 1.4e-33 146.0 88 87.5
AT2G22640 Arabidopsis thaliana HOM05D007087 ORTHO05D008968 1.4e-33 146.0 88 87.5
BcaB06g27810 Brassica carinata HOM05D007087 ORTHO05D008968 1.4e-33 146.0 88 87.5
Carub.0004s0180 Capsella rubella HOM05D007087 ORTHO05D008968 1.4e-33 146.0 88 87.5
Duzib147G0219 Durio zibethinus HOM05D007087 ORTHO05D008968 1.4e-33 146.0 85 90.6
ECA232G4432 Erigeron canadensis HOM05D007087 ORTHO05D008968 1.4e-33 146.0 88 86.4
Thhalv10000402m.g Eutrema salsugineum HOM05D007087 ORTHO05D008968 1.4e-33 146.0 88 87.5
FvH4_1g19040 Fragaria vesca HOM05D007087 ORTHO05D008968 1.4e-33 146.0 85 89.4
FAN23G1122 Fragaria x ananassa HOM05D007087 ORTHO05D008968 1.4e-33 146.0 85 89.4
FAN26G0060 Fragaria x ananassa HOM05D007087 ORTHO05D008968 1.4e-33 146.0 85 89.4
FAN28G2302 Fragaria x ananassa HOM05D007087 ORTHO05D008968 1.4e-33 146.0 85 89.4
HanXRQChr09g0262861 Helianthus annuus HOM05D007087 ORTHO05D008968 1.4e-33 146.0 88 86.4
Manes.12G121500 Manihot esculenta HOM05D007087 ORTHO05D008968 1.4e-33 146.0 88 87.5
RcHm_v2.0_Chr2g0110041 Rosa chinensis HOM05D007087 ORTHO05D008968 1.4e-33 146.0 85 89.4
Actinidia22784 Actinidia chinensis HOM05D007087 ORTHO05D008968 3.1e-33 144.8 88 86.4
CiPaw.07G042900 Carya illinoinensis HOM05D007087 ORTHO05D008968 3.1e-33 144.8 88 88.6
Ca_13466_v3 Cicer arietinum L. HOM05D007087 ORTHO05D008968 3.1e-33 144.8 88 87.5
Glyma.01G020200 Glycine max HOM05D007087 ORTHO05D008968 3.1e-33 144.8 88 87.5
Lsat_1_v5_gn_4_156341 Lactuca sativa HOM05D007087 ORTHO05D008968 3.1e-33 144.8 88 85.2
Lj2g0010143 Lotus japonicus HOM05D007087 ORTHO05D008968 3.1e-33 144.8 88 87.5
Medtr5g030935 Medicago truncatula HOM05D007087 ORTHO05D008968 3.1e-33 144.8 88 87.5
Oeu024989.2 Olea europaea HOM05D007087 ORTHO05D008968 3.1e-33 144.8 88 85.2
Phvul.002G143500 Phaseolus vulgaris HOM05D007087 ORTHO05D008968 3.1e-33 144.8 88 87.5
Psat2g134040 Pisum sativum HOM05D007087 ORTHO05D008968 3.1e-33 144.8 88 87.5
Hund16615 Selenicereus undatus HOM05D007087 ORTHO05D008968 3.1e-33 144.8 85 87.1
Atru.chr3.1157 Acer truncatum HOM05D007087 ORTHO05D008968 4.0e-33 144.4 85 89.4
Atru.chr3.1173 Acer truncatum HOM05D007087 ORTHO05D008968 4.0e-33 144.4 85 89.4
HanXRQChr11g0324431 Helianthus annuus HOM05D007087 ORTHO05D008968 4.0e-33 144.4 88 85.2
MBI16_g36494_MAGBIO Magnolia biondii HOM05D007087 ORTHO05D008968 4.0e-33 144.4 86 87.2
CiPaw.08G145100 Carya illinoinensis HOM05D007087 ORTHO05D008968 5.3e-33 144.1 88 86.4
MD01G1044400 Malus domestica HOM05D007087 ORTHO05D008968 5.3e-33 144.1 85 88.2
Prupe.6G209300 Prunus persica HOM05D007087 ORTHO05D008968 5.3e-33 144.1 85 88.2
TAR625G1164 Trochodendron aralioides HOM05D007087 ORTHO05D008968 5.3e-33 144.1 85 90.6
EL10Ac6g13306 Beta vulgaris HOM05D007087 ORTHO05D008968 6.9e-33 143.7 85 88.2
TPR.G37071 Trifolium pratense HOM05D007087 ORTHO05D008968 6.9e-33 143.7 88 86.4
MELO3C007697.2 Cucumis melo HOM05D007087 ORTHO05D008968 9.0e-33 143.3 88 85.2
Glyma.09G202200 Glycine max HOM05D007087 ORTHO05D008968 1.2e-32 142.9 88 86.4
Lalb_Chr05g0216201 Lupinus albus HOM05D007087 ORTHO05D008968 1.5e-32 142.5 88 86.4
THA.LOC104824923 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 1.5e-32 142.5 88 84.1
Cpa.g.sc129.16 Carica papaya HOM05D007087 ORTHO05D008968 2.0e-32 142.1 88 86.4
AUR62005889 Chenopodium quinoa HOM05D007087 ORTHO05D008968 4.5e-32 141.0 85 84.7
Lalb_Chr09g0325791 Lupinus albus HOM05D007087 ORTHO05D008968 4.5e-32 141.0 88 86.4
THA.LOC104807661 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 4.5e-32 141.0 85 85.9
Migut.L00449 Erythranthe guttata HOM05D007087 ORTHO05D008968 1.7e-31 139.0 85 83.5
Potri.014G010000 Populus trichocarpa HOM05D007087 ORTHO05D008968 3.8e-31 137.9 92 79.3
CDE01G0651 Ceratophyllum demersum HOM05D007087 ORTHO05D008968 4.2e-30 134.4 88 81.8
A09p57350 Brassica napus HOM05D007087 ORTHO05D008968 5.5e-30 134.0 88 81.8
BraA09t41128Z Brassica rapa HOM05D007087 ORTHO05D008968 5.5e-30 134.0 88 81.8
Zm00001eb259430 Zea mays HOM05D007087 ORTHO05D008968 1.8e-28 129.0 86 75.6
CAN.G11.24 Capsicum annuum HOM05D007087 ORTHO05D008968 2.3e-28 128.6 88 76.1
ATR0800G005 Amborella trichopoda HOM05D007087 ORTHO05D008968 1.5e-27 125.9 80 85.0
Sp4g01675 Schrenkiella parvula HOM05D007087 ORTHO05D008968 1.5e-27 125.9 74 89.2
Sabra14G0004400 Salix brachista HOM05D007087 ORTHO05D008968 1.9e-27 125.6 73 84.9
CsaV3_6G044750 Cucumis sativus L. HOM05D007087 ORTHO05D008968 4.3e-27 124.4 74 86.5
Sabra14G0001400 Salix brachista HOM05D007087 ORTHO05D008968 7.4e-27 123.6 75 82.7
Os02g0829900 Oryza sativa ssp. japonica HOM05D007087 ORTHO05D008968 1.3e-26 122.9 86 72.1
Dinv36975 Davidia involucrata HOM05D007087 ORTHO05D008968 2.1e-26 122.1 75 85.3
COL.COLO4_02760 Corchorus olitorius HOM05D007087 ORTHO05D008968 6.2e-26 120.6 85 80.0
Solyc03g043720.4 Solanum lycopersicum HOM05D007087 ORTHO05D008968 4.0e-25 117.9 88 71.6
Sopen03g007570 Solanum pennellii HOM05D007087 ORTHO05D008968 4.0e-25 117.9 88 71.6
PGSC0003DMG400016688 Solanum tuberosum HOM05D007087 ORTHO05D008968 4.0e-25 117.9 88 71.6
ClCG01G018190 Citrullus lanatus HOM05D007087 ORTHO05D008968 9.0e-25 116.7 75 82.7
Peaxi162Scf00118g00061 Petunia axillaris HOM05D007087 ORTHO05D008968 9.0e-25 116.7 86 72.1
Nitab4.5_0000465g0110 Nicotiana tabacum HOM05D007087 ORTHO05D008968 1.2e-24 116.3 88 71.6
BcaB08g35111 Brassica carinata HOM05D007087 ORTHO05D008968 1.5e-24 115.9 95 69.5
Cc07_g07910 Coffea canephora HOM05D007087 ORTHO05D008968 4.5e-24 114.4 85 71.8
Sed0015245 Sechium edule HOM05D007087 ORTHO05D008968 1.0e-23 113.2 88 69.3
Pp3c8_2740 Physcomitrium patens HOM05D007087 ORTHO05D008968 3.9e-20 101.3 71 71.8
AagrBONN_evm.TU.Sc2ySwM_344.2813 Anthoceros agrestis HOM05D007087 ORTHO05D008968 1.5e-19 99.4 76 64.5
Mapoly0132s0041 Marchantia polymorpha HOM05D007087 ORTHO05D008968 1.5e-19 99.4 72 68.1
Nitab4.5_0008656g0010 Nicotiana tabacum HOM05D007087 ORTHO05D008968 1.2e-16 89.7 88 61.4
SMO144G0170 Selaginella moellendorffii HOM05D007087 ORTHO05D008968 5.9e-16 87.4 69 59.4
Nn5g29785 Nelumbo nucifera HOM05D007087 ORTHO05D008968 2.9e-15 85.1 66 72.7
FAN19G2569 Fragaria x ananassa HOM05D007087 ORTHO05D008968 1.1e-14 83.2 48 85.4
Aa31LG7G14170 Aethionema arabicum HOM05D007087 ORTHO05D008968 4.2e-14 81.3 46 89.1
Actinidia36375 Actinidia chinensis HOM05D007087 ORTHO05D008968 2.0e-11 72.4 46 80.4
unitig_32.g10648 Utricularia gibba HOM05D007087 ORTHO05D008968 3.3e-11 71.6 46 76.1
SEGI_40703 Sequoiadendron giganteum HOM05D007087 ORTHO05D008968 4.1e-09 64.7 64 43.8


User provided reference genes

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