Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 1.5e-44 182.6 98 100.0
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 8.2e-19 97.1 91 64.8
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 1.6e-17 92.8 87 62.1
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 5.9e-17 90.9 90 57.8
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 1.3e-16 89.7 92 63.0
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 2.9e-16 88.6 86 60.5
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 1.5e-15 86.3 87 57.5
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 2.5e-15 85.5 81 59.3
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.5e-15 85.5 81 59.3
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 3.2e-15 85.1 85 58.8
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 4.2e-15 84.7 81 56.8
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 4.2e-15 84.7 81 58.0
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 4.2e-15 84.7 81 58.0
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 5.5e-15 84.3 81 59.3
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 5.5e-15 84.3 84 61.9
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 5.5e-15 84.3 86 58.1
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 7.2e-15 84.0 84 53.6
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 1.2e-14 83.2 87 58.6
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.6e-14 82.8 85 57.6
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.6e-14 82.8 85 57.6
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 2.7e-14 82.0 91 54.9
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 4.7e-14 81.3 85 54.1
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 4.7e-14 81.3 88 59.1
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 6.1e-14 80.9 84 52.4
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 1.4e-13 79.7 95 52.6
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 1.8e-13 79.3 84 54.8
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 2.3e-13 79.0 91 54.9
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 2.3e-13 79.0 91 56.0
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 3.0e-13 78.6 85 55.3
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 3.0e-13 78.6 85 55.3
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 5.2e-13 77.8 85 55.3
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 5.2e-13 77.8 93 47.3
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 5.2e-13 77.8 91 54.9
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 5.2e-13 77.8 89 56.2
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 5.2e-13 77.8 83 59.0
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 6.8e-13 77.4 101 53.5
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 6.8e-13 77.4 84 54.8
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 8.8e-13 77.0 91 53.8
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 8.8e-13 77.0 95 49.5
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 1.2e-12 76.6 87 55.2
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 1.2e-12 76.6 92 52.2
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 1.5e-12 76.3 87 57.5
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 2.0e-12 75.9 91 52.7
TAR381G0304 Trochodendron aralioides HOM05D007889 ORTHO05D009987 2.0e-12 75.9 88 53.4
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 2.6e-12 75.5 90 51.1
Nn5g29873 Nelumbo nucifera HOM05D007889 ORTHO05D009987 2.6e-12 75.5 88 52.3
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 3.4e-12 75.1 85 55.3
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 3.4e-12 75.1 89 50.6
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 5.7e-12 74.3 84 50.0
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 5.7e-12 74.3 88 54.5
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 5.7e-12 74.3 85 50.6
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 7.5e-12 73.9 92 51.1
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 7.5e-12 73.9 92 51.1
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 7.5e-12 73.9 92 51.1
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 9.8e-12 73.6 60 66.7
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.2e-11 72.4 96 50.0
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 2.8e-11 72.0 85 54.1
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 4.8e-11 71.2 85 50.6
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 6.3e-11 70.9 100 48.0
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.1e-10 70.1 85 44.7
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.4e-10 69.7 85 45.9
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 1.8e-10 69.3 84 48.8
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 3.1e-10 68.6 66 56.1
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 4.1e-10 68.2 67 62.7
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 5.4e-10 67.8 90 47.8
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 9.1e-10 67.0 87 51.7
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 9.1e-10 67.0 63 58.7
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 9.1e-10 67.0 64 60.9
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 9.1e-10 67.0 85 49.4
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 9.1e-10 67.0 84 47.6
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 2.0e-09 65.9 64 57.8
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 4.5e-09 64.7 55 65.5
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 1.3e-08 63.2 80 52.5
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 1.7e-08 62.8 68 54.4
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 5.0e-08 61.2 49 71.4
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 9.4e-07 57.0 67 49.3


User provided reference genes

Program Settings