Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 2.1e-132 475.7 244 100.0
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 2.8e-68 262.7 237 62.9
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 5.9e-66 255.0 237 62.0
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 4.7e-63 245.4 240 58.3
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 6.1e-63 245.0 239 58.6
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 1.0e-62 244.2 240 58.8
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 1.8e-62 243.4 235 59.6
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 3.0e-62 242.7 239 58.2
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 1.1e-61 240.7 239 58.2
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 1.5e-61 240.4 234 57.3
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 1.5e-61 240.4 240 58.3
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.0e-61 240.0 230 60.0
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 3.3e-61 239.2 240 57.9
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 5.7e-61 238.4 234 56.0
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 5.7e-61 238.4 240 58.3
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 7.4e-61 238.0 236 59.7
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 7.4e-61 238.0 242 55.8
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 9.7e-61 237.7 239 55.6
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 9.7e-61 237.7 240 57.9
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 1.3e-60 237.3 235 58.7
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 1.7e-60 236.9 239 57.3
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.7e-60 236.9 239 55.6
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 1.7e-60 236.9 229 58.1
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 1.7e-60 236.9 240 57.1
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 2.2e-60 236.5 236 59.3
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 2.2e-60 236.5 236 59.3
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.2e-60 236.5 240 55.4
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 3.7e-60 235.7 236 57.6
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 6.3e-60 235.0 239 54.4
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 8.2e-60 234.6 239 55.6
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 8.2e-60 234.6 240 57.1
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 1.8e-59 233.4 240 56.2
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 3.1e-59 232.6 240 56.2
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 2.0e-58 229.9 243 55.6
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 3.5e-58 229.2 239 54.4
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 4.5e-58 228.8 236 56.8
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 7.7e-58 228.0 234 57.7
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 7.7e-58 228.0 236 54.7
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 1.7e-57 226.9 227 53.7
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 1.7e-57 226.9 227 53.7
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 3.8e-57 225.7 239 52.7
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 6.5e-57 224.9 240 54.6
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 6.5e-57 224.9 236 54.2
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 6.5e-57 224.9 242 53.3
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 1.1e-56 224.2 236 55.9
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 1.1e-56 224.2 241 56.0
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 1.9e-56 223.4 235 53.2
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 1.9e-56 223.4 237 53.6
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 2.5e-56 223.0 244 54.1
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 4.2e-56 222.2 238 54.6
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 7.2e-56 221.5 227 53.7
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 7.2e-56 221.5 240 55.0
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 1.2e-55 220.7 232 52.6
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 2.1e-55 219.9 232 55.6
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 3.6e-55 219.2 232 53.4
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 3.6e-55 219.2 236 53.4
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 3.6e-55 219.2 225 54.7
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 6.1e-55 218.4 237 54.0
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 8.0e-55 218.0 232 53.0
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 1.0e-54 217.6 234 52.6
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 1.8e-54 216.9 236 53.0
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 4.0e-54 215.7 237 53.6
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 5.2e-54 215.3 237 53.6
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 5.2e-54 215.3 237 53.6
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 6.7e-54 214.9 230 53.9
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 1.5e-53 213.8 233 51.1
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 1.5e-53 213.8 236 53.8
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 1.5e-53 213.8 236 53.8
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 1.5e-53 213.8 232 52.6
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 1.5e-53 213.8 234 55.1
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 2.0e-53 213.4 234 55.1
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 2.0e-53 213.4 232 53.0
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 2.6e-53 213.0 240 53.8
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 3.3e-53 212.6 234 54.3
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 3.3e-53 212.6 234 54.3
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 5.7e-53 211.8 229 51.1
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 7.5e-53 211.5 239 51.5
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 1.3e-52 210.7 236 51.3
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 1.7e-52 210.3 229 52.4
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 3.7e-52 209.1 214 54.2
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 3.7e-52 209.1 238 51.7
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 3.6e-47 192.6 185 57.3
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 3.0e-46 189.5 235 47.7
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 5.2e-46 188.7 232 46.6
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 1.5e-45 187.2 180 56.7
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 2.2e-44 183.3 236 47.0
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 3.1e-43 179.5 239 47.7
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 4.1e-43 179.1 226 48.2
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 1.6e-42 177.2 235 48.1
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 2.0e-42 176.8 235 48.1
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 4.5e-42 175.6 234 45.7
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 5.9e-42 175.3 225 48.0
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 1.6e-39 167.2 233 42.9
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 2.8e-39 166.4 235 46.0
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 3.6e-39 166.0 229 44.5
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 3.6e-39 166.0 235 45.1
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 6.1e-39 165.2 231 47.2
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 6.1e-39 165.2 234 44.4
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 1.8e-38 163.7 231 44.2
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 1.8e-38 163.7 231 44.2
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 4.4e-37 159.1 235 44.7
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 5.7e-37 158.7 234 42.7
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 1.8e-35 153.7 234 42.3
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 2.9e-33 146.4 219 46.6
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 1.2e-31 141.0 222 39.2
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 3.6e-31 139.4 229 41.5
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 8.3e-28 128.3 250 35.2
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 3.5e-26 122.9 158 44.9
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 3.5e-26 122.9 158 44.9
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 2.3e-25 120.2 217 39.6
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 6.8e-22 108.6 116 44.8
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 4.9e-20 102.4 219 33.8
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 8.3e-20 101.7 222 36.0
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 4.3e-16 89.4 83 59.0
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 4.4e-13 79.3 83 49.4
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 9.9e-13 78.2 83 48.2
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 1.7e-12 77.4 168 33.3
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 4.1e-11 72.8 72 51.4
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 1.6e-10 70.9 64 57.8
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 2.1e-10 70.5 108 39.8


User provided reference genes

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