Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 1.2e-89 333.2 171 100.0
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 4.9e-59 231.5 165 73.9
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 2.1e-57 226.1 170 72.4
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 6.0e-57 224.6 168 72.0
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 1.3e-56 223.4 183 69.4
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 1.7e-56 223.0 169 72.2
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 8.6e-56 220.7 180 67.8
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 1.5e-55 219.9 184 67.9
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 4.3e-55 218.4 169 70.4
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 5.6e-55 218.0 182 67.6
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 7.3e-55 217.6 175 67.4
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 7.3e-55 217.6 189 67.7
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 7.3e-55 217.6 180 65.0
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 9.5e-55 217.2 167 71.3
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 1.2e-54 216.9 189 67.7
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 2.1e-54 216.1 171 70.2
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 2.8e-54 215.7 186 66.7
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 1.1e-53 213.8 188 63.8
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 1.4e-53 213.4 188 64.4
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 1.8e-53 213.0 171 69.6
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 3.1e-53 212.2 184 64.7
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 4.0e-53 211.8 175 66.3
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 5.2e-53 211.5 189 61.4
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 5.2e-53 211.5 177 65.0
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 6.8e-53 211.1 191 62.3
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 6.8e-53 211.1 182 63.7
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 8.9e-53 210.7 189 61.9
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 8.9e-53 210.7 184 63.0
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 2.0e-52 209.5 165 70.3
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 3.4e-52 208.8 180 62.8
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 7.6e-52 207.6 182 64.3
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 9.9e-52 207.2 175 65.7
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 2.2e-51 206.1 187 62.6
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 2.2e-51 206.1 191 60.7
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 2.9e-51 205.7 184 63.6
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 3.7e-51 205.3 181 64.6
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 3.7e-51 205.3 195 59.5
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 4.9e-51 204.9 184 61.4
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 6.4e-51 204.5 181 64.6
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 8.3e-51 204.1 184 63.6
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 1.1e-50 203.8 178 61.8
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 1.4e-50 203.4 186 60.2
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 1.4e-50 203.4 189 61.4
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 1.4e-50 203.4 195 61.0
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 2.4e-50 202.6 191 61.8
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 3.2e-50 202.2 179 61.5
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 3.2e-50 202.2 179 61.5
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 3.2e-50 202.2 184 60.3
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 7.1e-50 201.1 170 64.7
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 7.1e-50 201.1 177 61.6
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 9.2e-50 200.7 195 58.5
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 9.2e-50 200.7 190 60.5
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 1.2e-49 200.3 196 59.2
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 2.1e-49 199.5 190 60.5
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 2.7e-49 199.1 193 56.5
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 4.6e-49 198.4 208 57.2
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 7.8e-49 197.6 186 58.6
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 1.0e-48 197.2 179 62.6
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 1.0e-48 197.2 179 62.0
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 1.3e-48 196.8 185 59.5
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.7e-48 196.4 190 60.0
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 2.3e-48 196.1 187 58.3
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 2.3e-48 196.1 180 60.0
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 2.3e-48 196.1 186 60.2
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 3.9e-48 195.3 165 65.5
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 3.9e-48 195.3 182 59.3
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 3.9e-48 195.3 130 77.7
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 5.1e-48 194.9 181 59.7
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 5.1e-48 194.9 152 67.8
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 6.6e-48 194.5 188 58.0
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 8.6e-48 194.1 187 57.8
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 1.9e-47 193.0 167 63.5
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 4.3e-47 191.8 168 62.5
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 4.3e-47 191.8 197 59.9
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 4.3e-47 191.8 117 80.3
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 5.6e-47 191.4 112 82.1
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 7.3e-47 191.0 170 62.4
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 9.6e-47 190.7 188 56.9
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 9.6e-47 190.7 166 62.7
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 1.6e-46 189.9 181 58.0
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 1.6e-46 189.9 112 80.4
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 3.6e-46 188.7 186 56.5
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 3.6e-46 188.7 183 60.7
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 1.1e-45 187.2 168 61.9
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 1.4e-45 186.8 170 60.6
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 1.8e-45 186.4 110 81.8
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 4.0e-45 185.3 193 61.1
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 8.9e-45 184.1 111 79.3
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 1.2e-44 183.7 177 59.3
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.5e-44 183.3 187 56.1
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 1.5e-44 183.3 165 60.0
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 2.6e-44 182.6 115 77.4
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 4.4e-44 181.8 202 56.9
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 4.4e-44 181.8 164 60.4
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 5.8e-44 181.4 110 78.2
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 7.6e-44 181.0 187 55.6
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 2.2e-43 179.5 142 64.8
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 5.4e-42 174.9 116 75.9
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 2.7e-41 172.6 192 54.2
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 2.7e-41 172.6 124 69.4
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 4.6e-41 171.8 234 47.9
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 1.7e-40 169.9 184 54.3
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 3.0e-40 169.1 132 71.2
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 1.5e-39 166.8 149 63.8
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 1.4e-37 160.2 124 66.9
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 2.4e-37 159.5 186 51.6
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 5.8e-36 154.8 177 51.4
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 8.4e-35 151.0 92 76.1
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 1.9e-34 149.8 88 83.0
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 7.1e-34 147.9 92 75.0
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 7.1e-34 147.9 184 50.0
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 3.5e-33 145.6 113 61.9
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 7.8e-33 144.4 92 77.2
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 2.3e-32 142.9 83 85.5
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 7.3e-31 137.9 157 47.1
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 2.2e-27 126.3 70 78.6
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 2.2e-27 126.3 70 80.0
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 3.8e-27 125.6 90 64.4
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 3.8e-27 125.6 138 49.3
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 8.4e-27 124.4 97 59.8
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 1.6e-25 120.2 101 53.5
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 5.1e-24 115.2 94 54.3
Psat5g045880 Pisum sativum HOM05D006274 ORTHO05D007782 1.5e-23 113.6 136 54.4
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 1.4e-21 107.1 102 50.0
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 3.1e-21 105.9 125 44.8
CANSAT64G0910 Cannabis sativa HOM05D006274 ORTHO05D007782 1.2e-20 104.0 127 52.0
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 4.2e-18 95.5 92 53.3
Ca_28793_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 1.5e-07 60.5 85 34.1


User provided reference genes

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