Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01267 Aquilegia oxysepala HOM05D002103 ORTHO05D007890 2.5e-49 198.4 94 100.0
Aqoxy1G02088 Aquilegia oxysepala HOM05D002103 ORTHO05D007890 1.0e-34 149.8 91 78.0
Aqoxy1G04301 Aquilegia oxysepala HOM05D002103 ORTHO05D007890 2.3e-34 148.7 91 76.9
Aqoxy7G04203 Aquilegia oxysepala HOM05D002103 ORTHO05D007890 3.9e-34 147.9 91 76.9
TAR628G0377 Trochodendron aralioides HOM05D000369 ORTHO05D007890 3.9e-26 121.3 85 63.5
Nn5g30226 Nelumbo nucifera HOM05D002103 ORTHO05D007890 8.7e-26 120.2 92 56.5
TAR381G1315 Trochodendron aralioides HOM05D002103 ORTHO05D007890 8.7e-26 120.2 85 61.2
QL02p005396 Quercus lobata HOM05D002103 ORTHO05D007890 1.9e-25 119.0 86 60.5
Haze_17544 Corylus avellana HOM05D002103 ORTHO05D004020 2.5e-25 118.6 87 58.6
Haze_17553 Corylus avellana HOM05D002103 ORTHO05D004020 2.5e-25 118.6 87 58.6
Dinv35973 Davidia involucrata HOM05D002103 ORTHO05D004020 2.5e-25 118.6 86 62.8
PSO210G1636 Papaver somniferum HOM05D002103 ORTHO05D007890 3.3e-25 118.2 85 62.4
PSO339G5974 Papaver somniferum HOM05D002103 ORTHO05D007890 7.4e-25 117.1 84 61.9
Haze_18960 Corylus avellana HOM05D002103 ORTHO05D007890 9.6e-25 116.7 87 57.5
CiPaw.16G045900 Carya illinoinensis HOM05D002103 ORTHO05D007890 1.6e-24 115.9 88 60.2
PSO170G0070 Papaver somniferum HOM05D002103 ORTHO05D007890 2.1e-24 115.5 84 63.1
Ciclev10003422m.g Citrus clementina HOM05D002103 ORTHO05D007890 2.8e-24 115.2 80 62.5
Potri.014G032000 Populus trichocarpa HOM05D002103 ORTHO05D007890 2.8e-24 115.2 87 55.2
PSO801G0348 Papaver somniferum HOM05D002103 ORTHO05D007890 4.8e-24 114.4 84 60.7
Prupe.1G438600 Prunus persica HOM05D002103 ORTHO05D007890 4.8e-24 114.4 86 57.0
CSS0015524 Camellia sinensis var. sinensis HOM05D002103 ORTHO05D007890 6.2e-24 114.0 87 60.9
Sed0021207 Sechium edule HOM05D002103 ORTHO05D007890 6.2e-24 114.0 84 63.1
RcHm_v2.0_Chr6g0307451 Rosa chinensis HOM05D002103 ORTHO05D007890 8.2e-24 113.6 85 57.6
Thecc.08G011000 Theobroma cacao HOM05D002103 ORTHO05D007890 8.2e-24 113.6 85 58.8
ClCG08G015720 Citrullus lanatus HOM05D002103 ORTHO05D007890 1.1e-23 113.2 84 63.1
Gohir.A03G078312 Gossypium hirsutum HOM05D002103 ORTHO05D007890 1.8e-23 112.5 87 54.0
CSS0029487 Camellia sinensis var. sinensis HOM05D002103 ORTHO05D007890 2.4e-23 112.1 86 60.5
Oeu011541.1 Olea europaea HOM05D002103 ORTHO05D007890 2.4e-23 112.1 86 58.1
MSTRG.22267 Avicennia marina HOM05D002103 ORTHO05D007890 3.1e-23 111.7 86 59.3
MD08G1103500 Malus domestica HOM05D002103 ORTHO05D007890 3.1e-23 111.7 85 55.3
FvH4_2g34630 Fragaria vesca HOM05D002103 ORTHO05D007890 5.3e-23 110.9 85 55.3
Lalb_Chr23g0267731 Lupinus albus HOM05D002103 ORTHO05D007890 5.3e-23 110.9 79 63.3
TPR.G32346 Trifolium pratense HOM05D002103 ORTHO05D007890 5.3e-23 110.9 81 60.5
Gorai.005G103400 Gossypium raimondii HOM05D002103 ORTHO05D007890 6.9e-23 110.5 87 52.9
Oeu011560.1 Olea europaea HOM05D002103 ORTHO05D007890 6.9e-23 110.5 87 56.3
Sabra14G0022500 Salix brachista HOM05D002103 ORTHO05D007890 6.9e-23 110.5 87 54.0
Phvul.011G031400 Phaseolus vulgaris HOM05D002103 ORTHO05D007890 1.2e-22 109.8 79 62.0
RcHm_v2.0_Chr7g0208301 Rosa chinensis HOM05D002103 ORTHO05D007890 1.2e-22 109.8 84 56.0
Atru.chr13.649 Acer truncatum HOM05D002103 ORTHO05D007890 1.5e-22 109.4 86 54.7
Duzib116G0248 Durio zibethinus HOM05D002103 ORTHO05D007890 1.5e-22 109.4 85 55.3
COL.COLO4_26477 Corchorus olitorius HOM05D002103 ORTHO05D007890 2.0e-22 109.0 85 55.3
CsaV3_2G028050 Cucumis sativus L. HOM05D002103 ORTHO05D007890 2.0e-22 109.0 84 60.7
Duzib093G0968 Durio zibethinus HOM05D002103 ORTHO05D007890 2.0e-22 109.0 85 55.3
Glyma.11G102400 Glycine max HOM05D002103 ORTHO05D007890 2.0e-22 109.0 81 61.7
Actinidia22618 Actinidia chinensis HOM05D002103 ORTHO05D004020 2.6e-22 108.6 87 55.2
arahy.Tifrunner.gnm1.ann1.7RGS7A Arachis hypogaea HOM05D002103 ORTHO05D007890 2.6e-22 108.6 82 61.0
VMungo1127G1488 Vigna mungo HOM05D002103 ORTHO05D007890 2.6e-22 108.6 79 62.0
MD15G1084800 Malus domestica HOM05D002103 ORTHO05D007890 3.4e-22 108.2 80 55.0
Cc10_g04330 Coffea canephora HOM05D002103 ORTHO05D007890 4.5e-22 107.8 87 55.2
FAN20G2285 Fragaria x ananassa HOM05D002103 ORTHO05D007890 5.8e-22 107.5 85 52.9
Gohir.D02G092000 Gossypium hirsutum HOM05D002103 ORTHO05D007890 5.8e-22 107.5 87 51.7
Medtr3g006810 Medicago truncatula HOM05D002103 ORTHO05D007890 7.6e-22 107.1 79 59.5
Hma1.2p1_0982F.1_g243870 Hydrangea macrophylla HOM05D002103 ORTHO05D007890 1.3e-21 106.3 86 54.7
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.3e-21 106.3 86 53.5
Ca_14028_v3 Cicer arietinum L. HOM05D002103 ORTHO05D007890 1.7e-21 105.9 77 59.7
MELO3C010884.2 Cucumis melo HOM05D002103 ORTHO05D007890 1.7e-21 105.9 83 61.4
PGR083G1082 Punica granatum HOM05D002103 ORTHO05D007890 1.7e-21 105.9 86 58.1
Medtr6g003930 Medicago truncatula HOM05D002103 ORTHO05D007890 2.2e-21 105.5 79 58.2
Lj3g0001779 Lotus japonicus HOM05D002103 ORTHO05D007890 4.9e-21 104.4 79 59.5
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 6.5e-21 104.0 86 53.5
PGSC0003DMG400015418 Solanum tuberosum HOM05D002103 ORTHO05D007890 6.5e-21 104.0 86 53.5
CAN.G1422.7 Capsicum annuum HOM05D002103 ORTHO05D007890 8.4e-21 103.6 87 52.9
Migut.N02701 Erythranthe guttata HOM05D002103 ORTHO05D007890 1.1e-20 103.2 86 52.3
Sopen12g030780 Solanum pennellii HOM05D002103 ORTHO05D007890 1.1e-20 103.2 86 53.5
Psat5g230280 Pisum sativum HOM05D002103 ORTHO05D007890 1.4e-20 102.8 79 58.2
ECA247G1332 Erigeron canadensis HOM05D002103 ORTHO05D007890 1.9e-20 102.4 82 56.1
Lj1g0021003 Lotus japonicus HOM05D002103 ORTHO05D007890 1.9e-20 102.4 92 50.0
Eucgr.F00241 Eucalyptus grandis HOM05D002103 ORTHO05D007890 3.2e-20 101.7 84 52.4
Lj3P736T14 Lonicera japonica HOM05D002103 ORTHO05D007890 4.2e-20 101.3 86 55.8
Lj4C53T13 Lonicera japonica HOM05D002103 ORTHO05D007890 4.2e-20 101.3 86 55.8
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 5.5e-20 100.9 86 52.3
Cpa.g.c24415.2 Carica papaya HOM05D002103 ORTHO05D007890 7.1e-20 100.5 87 54.0
Manes.03G089400 Manihot esculenta HOM05D002103 ORTHO05D007890 1.6e-19 99.4 80 57.5
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 1.6e-19 99.4 86 51.2
Psat7g173600 Pisum sativum HOM05D002103 ORTHO05D007890 1.6e-19 99.4 80 55.0
AT4G10130 Arabidopsis thaliana HOM05D002103 ORTHO05D007890 2.1e-19 99.0 86 51.2
TWI56G0989 Tripterygium wilfordii HOM05D002103 ORTHO05D007890 2.1e-19 99.0 85 52.9
arahy.Tifrunner.gnm1.ann1.AI0I01 Arachis hypogaea HOM05D002103 ORTHO05D007890 2.7e-19 98.6 82 56.1
SGA_v2.0_scaffold62G21581 Striga asiatica HOM05D002103 ORTHO05D007890 6.0e-19 97.4 87 52.9
FAN27G2960 Fragaria x ananassa HOM05D002103 ORTHO05D007890 1.0e-18 96.7 80 51.2
Aa31LG9G11870 Aethionema arabicum HOM05D002103 ORTHO05D007890 2.3e-18 95.5 88 51.1
AL6G43940 Arabidopsis lyrata HOM05D002103 ORTHO05D007890 2.3e-18 95.5 86 50.0
SGA_v2.0_scaffold168G38534 Striga asiatica HOM05D002103 ORTHO05D007890 2.3e-18 95.5 82 53.7
THA.LOC104802577 Tarenaya hassleriana HOM05D002103 ORTHO05D007890 3.0e-18 95.1 83 50.6
Nitab4.5_0004376g0080 Nicotiana tabacum HOM05D002103 ORTHO05D007890 5.1e-18 94.4 86 50.0
SGA_v2.0_scaffold208G41999 Striga asiatica HOM05D002103 ORTHO05D007890 6.7e-18 94.0 89 51.7
HanXRQChr12g0375061 Helianthus annuus HOM05D002103 ORTHO05D007890 1.1e-17 93.2 80 55.0
Sc02g0007040 Simmondsia chinensis HOM05D002103 ORTHO05D004020 2.5e-17 92.0 79 49.4
HanXRQChr02g0037671 Helianthus annuus HOM05D002103 ORTHO05D007890 4.3e-17 91.3 80 53.8
Lsat_1_v5_gn_1_20241 Lactuca sativa HOM05D002103 ORTHO05D007890 4.3e-17 91.3 93 50.5
unitig_19.g30010 Utricularia gibba HOM05D002103 ORTHO05D007890 5.7e-17 90.9 87 47.1
unitig_8.g5018 Utricularia gibba HOM05D002103 ORTHO05D007890 5.7e-17 90.9 87 47.1
Carub.0006s2870 Capsella rubella HOM05D002103 ORTHO05D007890 9.7e-17 90.1 89 48.3
BcaB01g01453 Brassica carinata HOM05D002103 ORTHO05D007890 1.3e-16 89.7 80 47.5
Thhalv10029407m.g Eutrema salsugineum HOM05D002103 ORTHO05D007890 2.2e-16 89.0 88 46.6
Sp6g07290 Schrenkiella parvula HOM05D002103 ORTHO05D007890 2.8e-16 88.6 83 47.0
SpUn0121_0020 Schrenkiella parvula HOM05D002103 ORTHO05D007890 2.8e-16 88.6 83 47.0
BcaC04g21020 Brassica carinata HOM05D002103 ORTHO05D007890 4.8e-16 87.8 80 46.2
C09p36600 Brassica napus HOM05D002103 ORTHO05D007890 4.8e-16 87.8 80 46.2
BolC9t56492H Brassica oleracea HOM05D002103 ORTHO05D007890 4.8e-16 87.8 80 46.2
Dinv39329 Davidia involucrata HOM05D002103 ORTHO05D007890 6.3e-16 87.4 73 56.2
A09p28810 Brassica napus HOM05D002103 ORTHO05D007890 1.4e-15 86.3 80 46.2
BraA09t38443Z Brassica rapa HOM05D002103 ORTHO05D007890 1.4e-15 86.3 80 46.2
BcaB05g23918 Brassica carinata HOM05D002103 ORTHO05D007890 3.1e-15 85.1 93 45.2
CARHR261220 Cardamine hirsuta HOM05D002103 ORTHO05D007890 4.1e-15 84.7 83 47.0
Os08g0474600 Oryza sativa ssp. japonica HOM05D002103 ORTHO05D007890 2.0e-14 82.4 79 48.1
FAN15G2894 Fragaria x ananassa HOM05D002103 ORTHO05D004020 2.6e-14 82.0 75 49.3
EL10Ac3g05247 Beta vulgaris HOM05D002103 ORTHO05D007890 4.5e-14 81.3 80 50.0
Os09g0460000 Oryza sativa ssp. japonica HOM05D002103 ORTHO05D007890 5.0e-13 77.8 79 44.3
HPP92_016731 Vanilla planifolia HOM05D002103 ORTHO05D007890 5.0e-13 77.8 78 47.4
SHI08293 Sapria himalayana HOM05D002103 ORTHO05D007890 7.2e-12 73.9 85 44.7
arahy.Tifrunner.gnm1.ann1.MW41KC Arachis hypogaea HOM05D002103 ORTHO05D007890 1.6e-11 72.8 49 65.3
Zm00001eb315040 Zea mays HOM05D002103 ORTHO05D007890 3.6e-11 71.6 80 45.0
FAN15G1587 Fragaria x ananassa HOM05D002103 ORTHO05D007890 6.1e-11 70.9 69 44.9
Cfa018527 Carpinus fangiana HOM05D002103 ORTHO05D004020 7.9e-11 70.5 59 50.8
CANSAT11G1050 Cannabis sativa HOM05D002103 ORTHO05D007890 1.0e-10 70.1 80 42.5
ATR0605G347 Amborella trichopoda HOM05D002103 ORTHO05D007890 1.4e-10 69.7 80 42.5
Sc19g0008280 Simmondsia chinensis HOM05D002103 ORTHO05D007890 3.0e-10 68.6 60 45.0
Ah.13g070460 Amaranthus hybridus HOM05D005832 ORTHO05D007117 1.1e-09 66.6 68 44.1
Medtr4g074580 Medicago truncatula HOM05D002103 ORTHO05D007890 8.2e-08 60.5 37 64.9
AUR62006065 Chenopodium quinoa HOM05D005832 ORTHO05D007117 2.0e-06 55.8 44 52.3
CAN.G1335.15 Capsicum annuum HOM05D002103 ORTHO05D007890 2.6e-06 55.5 86 36.0
Glyma.12G141301 Glycine max HOM05D002103 ORTHO05D007890 4.5e-06 54.7 44 59.1


User provided reference genes

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