Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01233 Aquilegia oxysepala HOM05D004996 ORTHO05D005844 4.9e-174 614.4 315 100.0
TAR376G0493 Trochodendron aralioides HOM05D004996 ORTHO05D005844 3.7e-97 359.0 311 60.5
Cfa004020 Carpinus fangiana HOM05D004996 ORTHO05D005844 3.9e-94 349.0 316 57.0
CiPaw.02G008500 Carya illinoinensis HOM05D004996 ORTHO05D005844 4.7e-92 342.0 298 56.4
Haze_16999 Corylus avellana HOM05D004996 ORTHO05D005844 3.1e-91 339.3 278 60.8
Prupe.7G133700 Prunus persica HOM05D004996 ORTHO05D005844 5.2e-91 338.6 296 58.4
Haze_16997 Corylus avellana HOM05D004996 ORTHO05D005844 2.0e-90 336.7 270 61.1
MD15G1283600 Malus domestica HOM05D004996 ORTHO05D005844 2.6e-90 336.3 297 57.2
PSO210G5017 Papaver somniferum HOM05D004996 ORTHO05D005844 5.8e-90 335.1 319 59.6
COL.COLO4_11407 Corchorus olitorius HOM05D004996 ORTHO05D005844 7.5e-90 334.7 266 59.0
Ciclev10026041m.g Citrus clementina HOM05D004996 ORTHO05D005844 1.7e-89 333.6 319 55.2
PSO170G3325 Papaver somniferum HOM05D004996 ORTHO05D005844 2.2e-89 333.2 317 60.9
VMungo0647G1648 Vigna mungo HOM05D004996 ORTHO05D005844 8.3e-89 331.3 301 56.1
Sabra07G0038500 Salix brachista HOM05D004996 ORTHO05D005844 5.4e-88 328.6 302 56.6
FvH4_7g06480 Fragaria vesca HOM05D004996 ORTHO05D005844 7.1e-88 328.2 289 58.5
FAN10G3007 Fragaria x ananassa HOM05D004996 ORTHO05D005844 1.2e-87 327.4 304 55.6
Lj7A69G43 Lonicera japonica HOM05D004996 ORTHO05D005844 1.2e-87 327.4 277 57.4
GSVIVG01022135001 Vitis vinifera HOM05D004996 ORTHO05D005844 1.2e-87 327.4 267 59.6
RcHm_v2.0_Chr1g0334851 Rosa chinensis HOM05D004996 ORTHO05D005844 2.7e-87 326.2 304 55.3
Nn7g36483 Nelumbo nucifera HOM05D004996 ORTHO05D005844 3.5e-87 325.9 306 54.2
Duzib147G0592 Durio zibethinus HOM05D004996 ORTHO05D005844 6.0e-87 325.1 279 55.9
Thecc.01G055400 Theobroma cacao HOM05D004996 ORTHO05D005844 7.8e-87 324.7 295 54.9
Actinidia16491 Actinidia chinensis HOM05D004996 ORTHO05D005844 1.7e-86 323.6 264 59.8
Duzib187G0496 Durio zibethinus HOM05D004996 ORTHO05D005844 3.0e-86 322.8 315 53.0
FAN06G0805 Fragaria x ananassa HOM05D004996 ORTHO05D005844 3.9e-86 322.4 273 59.3
Glyma.14G012500 Glycine max HOM05D004996 ORTHO05D005844 1.1e-85 320.9 306 54.2
Phvul.008G280200 Phaseolus vulgaris HOM05D004996 ORTHO05D005844 1.1e-85 320.9 308 53.9
Hma1.2p1_0200F.1_g085840 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 1.9e-85 320.1 313 55.9
Hma1.2p1_2839F.1_g329295 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 1.9e-85 320.1 313 55.9
Potri.007G043600 Populus trichocarpa HOM05D004996 ORTHO05D005844 1.9e-85 320.1 314 53.5
DCAR_021441 Daucus carota HOM05D004996 ORTHO05D005844 5.6e-85 318.5 273 55.3
QL06p041440 Quercus lobata HOM05D004996 ORTHO05D005844 2.8e-84 316.2 266 58.3
Glyma.02G301700 Glycine max HOM05D004996 ORTHO05D005844 3.6e-84 315.8 296 53.4
TWI73G1146 Tripterygium wilfordii HOM05D004996 ORTHO05D005844 8.1e-84 314.7 305 54.4
Manes.13G124600 Manihot esculenta HOM05D004996 ORTHO05D005844 1.1e-83 314.3 278 58.6
Gohir.D11G198600 Gossypium hirsutum HOM05D004996 ORTHO05D005844 1.4e-83 313.9 280 56.8
Gorai.007G212700 Gossypium raimondii HOM05D004996 ORTHO05D005844 1.8e-83 313.5 277 57.8
LjContig00272g0020566 Lotus japonicus HOM05D004996 ORTHO05D005844 1.8e-83 313.5 269 54.6
LjContig00272g0002438 Lotus japonicus HOM05D004996 ORTHO05D005844 2.4e-83 313.2 269 54.6
Medtr5g096150 Medicago truncatula HOM05D004996 ORTHO05D005844 5.2e-83 312.0 317 49.5
CDE02G2298 Ceratophyllum demersum HOM05D004996 ORTHO05D005844 6.8e-83 311.6 279 57.0
Gohir.A11G192100 Gossypium hirsutum HOM05D004996 ORTHO05D005844 6.8e-83 311.6 302 54.3
Ca_05570_v3 Cicer arietinum L. HOM05D004996 ORTHO05D005844 8.9e-83 311.2 283 52.3
Rhsim08G0100700 Rhododendron simsii HOM05D004996 ORTHO05D005844 8.9e-83 311.2 308 52.9
Cpa.g.sc55.151 Carica papaya HOM05D004996 ORTHO05D005844 1.2e-82 310.8 311 52.1
Eucgr.I00930 Eucalyptus grandis HOM05D004996 ORTHO05D005844 1.5e-82 310.5 289 51.9
Phvul.008G280300 Phaseolus vulgaris HOM05D004996 ORTHO05D005844 2.6e-82 309.7 267 55.1
arahy.Tifrunner.gnm1.ann1.X0LXK2 Arachis hypogaea HOM05D004996 ORTHO05D005844 3.4e-82 309.3 283 52.7
CsaV3_2G016730 Cucumis sativus L. HOM05D004996 ORTHO05D005844 9.9e-82 307.8 301 51.2
Psat2g006800 Pisum sativum HOM05D004996 ORTHO05D005844 2.9e-81 306.2 293 51.2
MELO3C020912.2 Cucumis melo HOM05D004996 ORTHO05D005844 3.8e-81 305.8 300 52.0
FAN01G0777 Fragaria x ananassa HOM05D004996 ORTHO05D005844 3.8e-81 305.8 319 52.4
LjContig00081g0020523 Lotus japonicus HOM05D004996 ORTHO05D005844 1.1e-80 304.3 279 53.4
Solyc03g044470.4 Solanum lycopersicum HOM05D004996 ORTHO05D005844 1.4e-80 303.9 294 54.1
Nitab4.5_0001064g0040 Nicotiana tabacum HOM05D004996 ORTHO05D005844 1.9e-80 303.5 298 53.7
Nitab4.5_0000033g0420 Nicotiana tabacum HOM05D004996 ORTHO05D005844 2.4e-80 303.1 298 53.0
Oeu004826.1 Olea europaea HOM05D004996 ORTHO05D005844 3.2e-80 302.8 312 51.3
Sopen03g008630 Solanum pennellii HOM05D004996 ORTHO05D005844 5.4e-80 302.0 294 53.7
CAN.G11.7 Capsicum annuum HOM05D004996 ORTHO05D005844 7.1e-80 301.6 301 52.5
Sc07g0000030 Simmondsia chinensis HOM05D004996 ORTHO05D005844 1.2e-79 300.8 281 54.4
Sed0024126 Sechium edule HOM05D004996 ORTHO05D005844 1.6e-79 300.4 269 55.0
Cc03_g11370 Coffea canephora HOM05D004996 ORTHO05D005844 2.1e-79 300.1 318 49.7
PGSC0003DMG400018987 Solanum tuberosum HOM05D004996 ORTHO05D005844 2.1e-79 300.1 273 55.3
HanXRQChr14g0442821 Helianthus annuus HOM05D004996 ORTHO05D005844 2.7e-79 299.7 296 52.7
ClCG02G012610 Citrullus lanatus HOM05D004996 ORTHO05D005844 3.5e-79 299.3 291 52.6
MSTRG.23749 Avicennia marina HOM05D004996 ORTHO05D005844 4.6e-79 298.9 275 53.1
AUR62003879 Chenopodium quinoa HOM05D004996 ORTHO05D005844 4.6e-79 298.9 294 53.7
Lsat_1_v5_gn_2_84140 Lactuca sativa HOM05D004996 ORTHO05D005844 6.0e-79 298.5 306 52.3
PGR004G2460 Punica granatum HOM05D004996 ORTHO05D005844 6.0e-79 298.5 268 53.0
CANSAT01G2652 Cannabis sativa HOM05D004996 ORTHO05D005844 1.3e-78 297.4 274 54.7
Lalb_Chr17g0348991 Lupinus albus HOM05D004996 ORTHO05D005844 1.3e-78 297.4 277 53.1
SalBow6G7153 Salvia bowleyana HOM05D004996 ORTHO05D005844 3.9e-78 295.8 302 51.0
CDE02G3886 Ceratophyllum demersum HOM05D004996 ORTHO05D005844 3.3e-77 292.7 297 51.5
ECA238G3150 Erigeron canadensis HOM05D004996 ORTHO05D005844 5.6e-77 292.0 283 52.7
vmacro17952 Vaccinium macrocarpon HOM05D004996 ORTHO05D005844 1.2e-76 290.8 271 55.0
CANSAT11G2671 Cannabis sativa HOM05D004996 ORTHO05D005844 2.8e-76 289.7 303 50.5
CANSAT11G1602 Cannabis sativa HOM05D004996 ORTHO05D005844 6.2e-76 288.5 303 50.2
Migut.H00434 Erythranthe guttata HOM05D004996 ORTHO05D005844 6.2e-76 288.5 305 50.2
Peaxi162Scf00685g00059 Petunia axillaris HOM05D004996 ORTHO05D005844 8.1e-76 288.1 295 51.5
Ah.02g120540 Amaranthus hybridus HOM05D004996 ORTHO05D005844 6.9e-75 285.0 282 51.4
TPR.G36603 Trifolium pratense HOM05D004996 ORTHO05D005844 2.0e-74 283.5 267 50.6
Thhalv10025731m.g Eutrema salsugineum HOM05D004996 ORTHO05D005844 3.8e-73 279.3 317 48.9
THA.LOC104807582 Tarenaya hassleriana HOM05D004996 ORTHO05D005844 3.5e-71 272.7 313 47.6
A01p01870 Brassica napus HOM05D004996 ORTHO05D005844 7.8e-71 271.6 320 46.9
EL10Ac6g15748 Beta vulgaris HOM05D004996 ORTHO05D005844 1.0e-70 271.2 303 46.9
Haze_15405 Corylus avellana HOM05D004996 ORTHO05D005844 1.0e-70 271.2 297 46.1
C01p02010 Brassica napus HOM05D004996 ORTHO05D005844 1.7e-70 270.4 320 47.2
CARHR245500 Cardamine hirsuta HOM05D004996 ORTHO05D005844 1.7e-70 270.4 316 47.5
unitig_736.g22663 Utricularia gibba HOM05D004996 ORTHO05D005844 3.9e-70 269.2 284 47.2
Cfa004018 Carpinus fangiana HOM05D004996 ORTHO05D005844 5.1e-70 268.9 281 47.0
BraA01t00176Z Brassica rapa HOM05D004996 ORTHO05D005844 6.6e-70 268.5 319 46.4
Hund13551 Selenicereus undatus HOM05D004996 ORTHO05D005844 1.5e-69 267.3 291 47.8
Sp7g34760 Schrenkiella parvula HOM05D004996 ORTHO05D005844 1.9e-69 266.9 316 46.5
QL06p041448 Quercus lobata HOM05D004996 ORTHO05D005844 2.5e-69 266.5 268 47.8
SGA_v2.0_scaffold15G07296 Striga asiatica HOM05D004996 ORTHO05D005844 3.3e-69 266.2 276 50.4
Thhalv10027846m.g Eutrema salsugineum HOM05D004996 ORTHO05D005844 9.6e-69 264.6 280 49.6
Carub.0007s0320 Capsella rubella HOM05D004996 ORTHO05D005844 1.6e-68 263.8 310 46.5
CiPaw.01G018500 Carya illinoinensis HOM05D004996 ORTHO05D005844 1.6e-68 263.8 306 45.4
Potri.007G043700 Populus trichocarpa HOM05D004996 ORTHO05D005844 2.1e-68 263.5 299 45.8
ClCG02G012600 Citrullus lanatus HOM05D004996 ORTHO05D005844 4.8e-68 262.3 294 43.5
Atru.chr3.335 Acer truncatum HOM05D004996 ORTHO05D005844 6.2e-68 261.9 272 50.4
Aa31LG6G13970 Aethionema arabicum HOM05D004996 ORTHO05D005844 1.8e-67 260.4 289 48.1
Ciclev10026248m.g Citrus clementina HOM05D004996 ORTHO05D005844 2.4e-67 260.0 268 49.6
CsaV3_2G016720 Cucumis sativus L. HOM05D004996 ORTHO05D005844 4.0e-67 259.2 319 42.9
AL7G13770 Arabidopsis lyrata HOM05D004996 ORTHO05D005844 6.9e-67 258.5 302 46.4
MELO3C020913.2 Cucumis melo HOM05D004996 ORTHO05D005844 9.0e-67 258.1 295 42.4
Thhalv10027845m.g Eutrema salsugineum HOM05D004996 ORTHO05D005844 2.0e-66 256.9 301 47.2
AT4G37000 Arabidopsis thaliana HOM05D004996 ORTHO05D005844 2.6e-66 256.5 318 44.7
Os10g0389200 Oryza sativa ssp. japonica HOM05D004996 ORTHO05D005844 3.4e-66 256.1 248 49.2
Dinv29984 Davidia involucrata HOM05D004996 ORTHO05D005844 9.9e-66 254.6 206 63.6
Zm00001eb027950 Zea mays HOM05D004996 ORTHO05D005844 1.7e-65 253.8 240 49.6
ATR0009G017 Amborella trichopoda HOM05D004996 ORTHO05D005844 2.2e-65 253.4 292 46.2
BolC1t00195H Brassica oleracea HOM05D004996 ORTHO05D005844 4.2e-64 249.2 354 42.4
HPP92_028287 Vanilla planifolia HOM05D004996 ORTHO05D005844 2.7e-63 246.5 304 42.4
Sed0020584 Sechium edule HOM05D004996 ORTHO05D005844 4.6e-63 245.7 292 42.5
TWI53G0428 Tripterygium wilfordii HOM05D004996 ORTHO05D005844 1.8e-62 243.8 296 43.6
BcaNung02518 Brassica carinata HOM05D004996 ORTHO05D005844 2.3e-62 243.4 318 43.7
CSS0031276 Camellia sinensis var. sinensis HOM05D004996 ORTHO05D005844 2.3e-62 243.4 197 61.4
Sabra07G0038400 Salix brachista HOM05D004996 ORTHO05D005844 6.7e-62 241.9 311 42.8
Hma1.2p1_0200F.1_g085860 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 1.5e-61 240.7 202 60.4
Hma1.2p1_2839F.1_g329298 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 1.5e-61 240.7 202 60.4
TPR.G36604 Trifolium pratense HOM05D004996 ORTHO05D005844 9.0e-59 231.5 201 52.2
Potri.007G043500 Populus trichocarpa HOM05D004996 ORTHO05D005844 1.5e-58 230.7 236 46.2
TWI09G1278 Tripterygium wilfordii HOM05D004996 ORTHO05D005844 1.6e-55 220.7 260 45.0
Ah.06g186350 Amaranthus hybridus HOM05D004996 ORTHO05D005844 6.7e-54 215.3 264 42.8
Hund13537 Selenicereus undatus HOM05D004996 ORTHO05D005844 6.7e-54 215.3 292 41.1
Atru.chr3.332 Acer truncatum HOM05D004996 ORTHO05D005844 2.0e-50 203.8 215 51.2
AagrBONN_evm.TU.Sc2ySwM_368.2728 Anthoceros agrestis HOM05D004996 ORTHO05D005844 4.2e-48 196.1 292 38.0
SMO348G0076 Selaginella moellendorffii HOM05D004996 ORTHO05D005844 5.5e-48 195.7 262 38.5
Pp3c15_3570 Physcomitrium patens HOM05D004996 ORTHO05D005844 7.1e-48 195.3 288 36.8
Mapoly0002s0316 Marchantia polymorpha HOM05D004996 ORTHO05D005844 1.0e-46 191.4 260 40.0
AUR62001931 Chenopodium quinoa HOM05D004996 ORTHO05D005844 1.3e-46 191.0 172 54.7
Hund13538 Selenicereus undatus HOM05D004996 ORTHO05D005844 1.3e-46 191.0 301 37.5
HanXRQChr14g0442841 Helianthus annuus HOM05D004996 ORTHO05D005844 3.3e-45 186.4 178 52.8
AagrBONN_evm.TU.Sc2ySwM_340.386 Anthoceros agrestis HOM05D004996 ORTHO05D005844 5.7e-45 185.7 264 37.5
Mapoly0007s0155 Marchantia polymorpha HOM05D004996 ORTHO05D005844 2.8e-44 183.3 271 35.8
Os10g0389300 Oryza sativa ssp. japonica HOM05D004996 ORTHO05D005844 4.1e-35 152.9 207 42.5
Os10g0389100 Oryza sativa ssp. japonica HOM05D004996 ORTHO05D005844 3.4e-26 123.2 200 34.5
Dinv39853 Davidia involucrata HOM05D004996 ORTHO05D005844 1.3e-25 121.3 95 62.1
HPP92_019276 Vanilla planifolia HOM05D004996 ORTHO05D005844 5.7e-21 105.9 121 40.5
CBR_g39811 Chara braunii HOM05D004996 ORTHO05D005844 2.7e-15 87.0 265 25.7
Hma1.2p1_0200F.1_g085850 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 1.8e-14 84.3 109 47.7
Hma1.2p1_2839F.1_g329297 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 1.8e-14 84.3 109 47.7
TPR.G22736 Trifolium pratense HOM05D004996 ORTHO05D005844 1.8e-14 84.3 83 39.8
Atru.chr3.333 Acer truncatum HOM05D004996 ORTHO05D005844 6.7e-14 82.4 87 43.7
CBR_g39812 Chara braunii HOM05D004996 ORTHO05D005844 6.7e-14 82.4 262 24.8
Mapoly0002s0315 Marchantia polymorpha HOM05D004996 ORTHO05D005844 3.7e-12 76.6 131 32.8
TPR.G22585 Trifolium pratense HOM05D004996 ORTHO05D005844 3.7e-12 76.6 71 56.3
CBR_g39828 Chara braunii HOM05D001539 ORTHO05D008140 8.2e-12 75.5 231 24.2


User provided reference genes

Program Settings