Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 3.0e-56 222.2 172 100.0
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 6.9e-37 157.9 124 74.2
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 4.5e-36 155.2 121 73.6
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 5.5e-34 148.3 116 72.4
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 7.1e-34 147.9 124 70.2
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 9.3e-34 147.5 120 73.3
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 2.1e-33 146.4 119 69.7
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 2.7e-33 146.0 113 75.2
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 4.6e-33 145.2 113 74.3
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 7.9e-33 144.4 113 74.3
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 1.8e-32 143.3 117 71.8
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 2.3e-32 142.9 119 69.7
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 3.0e-32 142.5 120 71.7
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 8.7e-32 141.0 114 71.9
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 1.1e-31 140.6 112 74.1
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 1.1e-31 140.6 118 68.6
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 2.5e-31 139.4 121 67.8
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 2.5e-31 139.4 110 73.6
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 3.3e-31 139.0 114 71.9
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 5.7e-31 138.3 120 68.3
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 7.4e-31 137.9 114 70.2
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 7.4e-31 137.9 114 70.2
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 7.4e-31 137.9 115 71.3
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 9.7e-31 137.5 114 72.8
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 1.3e-30 137.1 120 66.7
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.6e-30 136.7 115 70.4
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 2.2e-30 136.3 120 67.5
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 2.8e-30 136.0 116 66.4
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 2.8e-30 136.0 113 69.9
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 2.8e-30 136.0 114 67.5
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 3.7e-30 135.6 121 68.6
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 3.7e-30 135.6 115 70.4
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 8.2e-30 134.4 120 66.7
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 1.4e-29 133.7 114 66.7
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 1.4e-29 133.7 112 70.5
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 1.8e-29 133.3 114 67.5
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 1.8e-29 133.3 114 67.5
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 1.8e-29 133.3 114 70.2
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 4.1e-29 132.1 113 70.8
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 6.9e-29 131.3 118 66.9
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 1.2e-28 130.6 114 68.4
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 1.2e-28 130.6 121 64.5
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 1.5e-28 130.2 120 65.8
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.0e-27 127.5 111 69.4
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 1.0e-27 127.5 112 67.9
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 2.2e-27 126.3 109 68.8
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 2.9e-27 125.9 122 68.0
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 3.8e-27 125.6 111 68.5
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 5.0e-27 125.2 121 64.5
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 5.0e-27 125.2 114 65.8
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 8.5e-27 124.4 113 64.6
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 1.1e-26 124.0 108 67.6
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 3.2e-26 122.5 118 64.4
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 1.6e-25 120.2 121 60.3
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 3.6e-25 119.0 114 65.8
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 3.6e-25 119.0 110 66.4
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 1.3e-24 117.1 111 67.6
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 3.0e-24 115.9 117 61.5
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 3.0e-24 115.9 114 62.3
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 6.7e-24 114.8 115 66.1
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 1.1e-23 114.0 111 63.1
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 2.5e-23 112.8 120 57.5
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 3.3e-23 112.5 114 61.4
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.2e-22 109.8 97 66.0
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 3.7e-22 109.0 113 61.9
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 4.8e-22 108.6 114 60.5
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 1.5e-20 103.6 111 57.7
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 2.6e-20 102.8 115 59.1
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 3.4e-20 102.4 114 59.6
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 3.4e-20 102.4 105 60.0
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 4.5e-20 102.1 113 58.4
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 7.7e-20 101.3 122 54.9
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 1.0e-19 100.9 115 58.3
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 5.0e-19 98.6 80 71.2
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 5.0e-19 98.6 113 55.8
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 5.0e-19 98.6 113 61.1
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 6.5e-19 98.2 80 68.8
TAR381G1012 Trochodendron aralioides HOM05D005490 ORTHO05D006606 1.1e-18 97.4 77 80.5
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 2.5e-18 96.3 80 70.0
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 3.2e-18 95.9 80 70.0
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 5.5e-18 95.1 113 54.9
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 5.5e-18 95.1 111 56.8
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 1.2e-17 94.0 80 68.8
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 2.1e-17 93.2 81 63.0
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 2.1e-17 93.2 81 64.2
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 2.7e-17 92.8 81 63.0
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 3.6e-17 92.4 111 55.9
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 6.1e-17 91.7 82 63.4
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 1.0e-16 90.9 114 54.4
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 1.4e-16 90.5 77 67.5
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.4e-16 90.5 80 68.8
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 1.4e-16 90.5 79 63.3
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 1.4e-16 90.5 79 63.3
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 3.0e-16 89.4 89 62.9
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 3.9e-16 89.0 72 70.8
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 2.6e-15 86.3 147 49.0
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 2.6e-15 86.3 95 60.0
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 2.6e-15 86.3 95 56.8
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 3.3e-15 85.9 74 66.2
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 5.7e-15 85.1 75 68.0
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 9.7e-15 84.3 121 50.4
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 1.1e-13 80.9 77 63.6
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 1.8e-13 80.1 122 48.4
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 3.1e-13 79.3 80 58.8
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 4.1e-13 79.0 116 48.3
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 2.6e-12 76.3 81 63.0
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 2.2e-11 73.2 77 63.6
Actinidia12052 Actinidia chinensis HOM05D005490 ORTHO05D006606 6.7e-08 61.6 80 45.0
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 1.3e-06 57.4 90 47.8


User provided reference genes

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