Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01223 Aquilegia oxysepala HOM05D002191 ORTHO05D031251 7.9e-49 196.8 101 100.0
Nn5g30283 Nelumbo nucifera HOM05D002191 ORTHO05D002292 1.4e-13 79.7 88 59.1
Cfa018086 Carpinus fangiana HOM05D002191 ORTHO05D002292 9.1e-13 77.0 77 59.7
TAR625G0689 Trochodendron aralioides HOM05D002191 ORTHO05D002292 1.2e-12 76.6 88 59.1
Dinv39306 Davidia involucrata HOM05D002191 ORTHO05D002292 2.6e-12 75.5 78 60.3
Dinv35950 Davidia involucrata HOM05D002191 ORTHO05D002292 3.5e-12 75.1 57 73.7
TAR381G1221 Trochodendron aralioides HOM05D002191 ORTHO05D002292 5.9e-12 74.3 85 62.4
CSS0019866 Camellia sinensis var. sinensis HOM05D002191 ORTHO05D002292 1.0e-11 73.6 62 69.4
Nn1g04838 Nelumbo nucifera HOM05D002191 ORTHO05D002292 1.0e-11 73.6 49 81.6
GSVIVG01009482001 Vitis vinifera HOM05D002191 ORTHO05D002292 1.0e-11 73.6 80 60.0
Hma1.2p1_2112F.1_g314230 Hydrangea macrophylla HOM05D002191 ORTHO05D031251 5.0e-11 71.2 51 78.4
COL.COLO4_26522 Corchorus olitorius HOM05D002191 ORTHO05D002292 1.1e-10 70.1 80 58.8
CANSAT25G2991 Cannabis sativa HOM05D002191 ORTHO05D002292 1.9e-10 69.3 77 57.1
Eucgr.F02334 Eucalyptus grandis HOM05D002191 ORTHO05D002292 1.9e-10 69.3 60 68.3
QL02p004649 Quercus lobata HOM05D002191 ORTHO05D002292 1.9e-10 69.3 77 57.1
MBI03_g13476_MAGBIO Magnolia biondii HOM05D002191 ORTHO05D002292 3.2e-10 68.6 59 64.4
Potri.014G027900 Populus trichocarpa HOM05D002191 ORTHO05D002292 3.2e-10 68.6 60 70.0
Gohir.D06G017500 Gossypium hirsutum HOM05D002191 ORTHO05D002292 4.2e-10 68.2 76 60.5
Gorai.010G020400 Gossypium raimondii HOM05D002191 ORTHO05D002292 4.2e-10 68.2 76 60.5
Manes.18G038200 Manihot esculenta HOM05D002191 ORTHO05D002292 4.2e-10 68.2 77 59.7
CiPaw.15G055500 Carya illinoinensis HOM05D002191 ORTHO05D002292 5.5e-10 67.8 80 52.5
Lj4C771T16 Lonicera japonica HOM05D002191 ORTHO05D002292 5.5e-10 67.8 78 53.8
Psat6g012960 Pisum sativum HOM05D002191 ORTHO05D002292 7.2e-10 67.4 80 50.0
Gohir.A06G019100 Gossypium hirsutum HOM05D002191 ORTHO05D002292 9.4e-10 67.0 48 77.1
Hma1.2p1_0360F.1_g135580 Hydrangea macrophylla HOM05D002191 ORTHO05D002292 9.4e-10 67.0 49 77.6
TAR383G0683 Trochodendron aralioides HOM05D002191 ORTHO05D031251 9.4e-10 67.0 51 76.5
Atru.chr13.706_Atru.chr13.707 Acer truncatum HOM05D002191 ORTHO05D002292 1.2e-09 66.6 48 77.1
Actinidia38062 Actinidia chinensis HOM05D002191 ORTHO05D002292 1.2e-09 66.6 56 67.9
Sabra14G0019000 Salix brachista HOM05D002191 ORTHO05D002292 1.6e-09 66.2 58 70.7
Duzib093G1665 Durio zibethinus HOM05D002191 ORTHO05D002292 2.1e-09 65.9 48 79.2
Nitab4.5_0000287g0220 Nicotiana tabacum HOM05D002191 ORTHO05D002292 2.1e-09 65.9 57 64.9
Solyc04g078810.4 Solanum lycopersicum HOM05D002191 ORTHO05D002292 2.1e-09 65.9 78 53.8
Sopen04g032410 Solanum pennellii HOM05D002191 ORTHO05D002292 2.1e-09 65.9 78 53.8
PGSC0003DMG401008010 Solanum tuberosum HOM05D002191 ORTHO05D002292 2.1e-09 65.9 78 53.8
PGSC0003DMG402008010 Solanum tuberosum HOM05D002191 ORTHO05D002292 2.1e-09 65.9 78 53.8
Cpa.g.sc49.29 Carica papaya HOM05D002191 ORTHO05D002292 2.7e-09 65.5 48 75.0
Peaxi162Scf00458g00318 Petunia axillaris HOM05D002191 ORTHO05D002292 2.7e-09 65.5 49 73.5
Ciclev10000692m.g Citrus clementina HOM05D002191 ORTHO05D002292 3.6e-09 65.1 55 69.1
Oeu012422.2 Olea europaea HOM05D002191 ORTHO05D002292 4.7e-09 64.7 49 73.5
PGR031G3008 Punica granatum HOM05D002191 ORTHO05D002292 6.1e-09 64.3 80 57.5
vmacro04445 Vaccinium macrocarpon HOM05D002191 ORTHO05D002292 6.1e-09 64.3 56 67.9
TPR.G3808 Trifolium pratense HOM05D002191 ORTHO05D002292 8.0e-09 63.9 80 50.0
CiPaw.16G042600 Carya illinoinensis HOM05D002191 ORTHO05D002292 1.0e-08 63.5 48 68.8
CDE08G1143 Ceratophyllum demersum HOM05D002191 ORTHO05D002292 1.0e-08 63.5 49 71.4
AUR62043210 Chenopodium quinoa HOM05D002191 ORTHO05D002292 1.0e-08 63.5 51 68.6
ClCG08G016010 Citrullus lanatus HOM05D002191 ORTHO05D002292 1.0e-08 63.5 86 48.8
Duzib116G0100 Durio zibethinus HOM05D002191 ORTHO05D002292 1.0e-08 63.5 80 53.8
Phvul.001G022700 Phaseolus vulgaris HOM05D002191 ORTHO05D002292 1.0e-08 63.5 80 50.0
VMungo0647G1146 Vigna mungo HOM05D002191 ORTHO05D002292 1.0e-08 63.5 80 50.0
AUR62031368 Chenopodium quinoa HOM05D002191 ORTHO05D002292 1.4e-08 63.2 51 68.6
Glyma.14G083500 Glycine max HOM05D002191 ORTHO05D002292 1.4e-08 63.2 47 72.3
Glyma.17G241500 Glycine max HOM05D002191 ORTHO05D002292 1.4e-08 63.2 47 72.3
Medtr1g019280 Medicago truncatula HOM05D002191 ORTHO05D002292 1.4e-08 63.2 81 50.6
Nitab4.5_0008020g0020 Nicotiana tabacum HOM05D002191 ORTHO05D002292 1.4e-08 63.2 57 63.2
Potri.002G125200 Populus trichocarpa HOM05D002191 ORTHO05D002292 1.4e-08 63.2 57 70.2
Duzib041G0280 Durio zibethinus HOM05D002191 ORTHO05D002292 1.8e-08 62.8 45 77.8
CAN.G1030.13 Capsicum annuum HOM05D002191 ORTHO05D002292 2.3e-08 62.4 58 62.1
Lj1g0019274 Lotus japonicus HOM05D002191 ORTHO05D002292 2.3e-08 62.4 49 67.3
Rhsim07G0228000 Rhododendron simsii HOM05D002191 ORTHO05D002292 2.3e-08 62.4 49 71.4
Sabra02G0098300 Salix brachista HOM05D002191 ORTHO05D002292 2.3e-08 62.4 48 75.0
Actinidia23286 Actinidia chinensis HOM05D002191 ORTHO05D002292 3.0e-08 62.0 56 57.1
Manes.05G174600 Manihot esculenta HOM05D002191 ORTHO05D002292 4.0e-08 61.6 48 72.9
Ca_13287_v3 Cicer arietinum L. HOM05D002191 ORTHO05D002292 6.7e-08 60.8 47 70.2
Lalb_Chr14g0368621 Lupinus albus HOM05D002191 ORTHO05D002292 6.7e-08 60.8 78 52.6
Gohir.A05G203300 Gossypium hirsutum HOM05D002191 ORTHO05D002292 8.8e-08 60.5 45 75.6
Gohir.D05G206400 Gossypium hirsutum HOM05D002191 ORTHO05D002292 8.8e-08 60.5 45 75.6
Gorai.009G212800 Gossypium raimondii HOM05D002191 ORTHO05D002292 8.8e-08 60.5 45 75.6
SalBow6G0651 Salvia bowleyana HOM05D002191 ORTHO05D002292 8.8e-08 60.5 49 69.4
Actinidia22638 Actinidia chinensis HOM05D002191 ORTHO05D002292 1.5e-07 59.7 78 50.0
CDE04G1850 Ceratophyllum demersum HOM05D002191 ORTHO05D002292 2.0e-07 59.3 49 67.3
MELO3C010849.2 Cucumis melo HOM05D002191 ORTHO05D002292 2.6e-07 58.9 77 49.4
TWI56G0639 Tripterygium wilfordii HOM05D002191 ORTHO05D002292 2.6e-07 58.9 59 62.7
Hund24033 Selenicereus undatus HOM05D002191 ORTHO05D002292 3.3e-07 58.5 52 61.5
Hund30799 Selenicereus undatus HOM05D002191 ORTHO05D002292 3.3e-07 58.5 52 61.5
THA.LOC104812570 Tarenaya hassleriana HOM05D002191 ORTHO05D002292 4.4e-07 58.2 56 60.7
Prupe.1G434200 Prunus persica HOM05D002191 ORTHO05D002292 7.5e-07 57.4 45 73.3
SGA_v2.0_scaffold14G06995 Striga asiatica HOM05D002191 ORTHO05D002292 7.5e-07 57.4 48 66.7
arahy.Tifrunner.gnm1.ann1.CE0UAC Arachis hypogaea HOM05D002191 ORTHO05D002292 9.7e-07 57.0 45 71.1
arahy.Tifrunner.gnm1.ann1.ZNK5XH Arachis hypogaea HOM05D002191 ORTHO05D002292 9.7e-07 57.0 45 71.1
MELO3C016759.2 Cucumis melo HOM05D002191 ORTHO05D002292 1.7e-06 56.2 48 64.6
CsaV3_4G034380 Cucumis sativus L. HOM05D002191 ORTHO05D002292 1.7e-06 56.2 48 64.6
Migut.N02715 Erythranthe guttata HOM05D002191 ORTHO05D002292 2.2e-06 55.8 81 49.4
Sed0013931 Sechium edule HOM05D002191 ORTHO05D002292 2.2e-06 55.8 70 50.0
Ah.05g167380 Amaranthus hybridus HOM05D002191 ORTHO05D002292 2.8e-06 55.5 49 63.3
Cc10_g04500 Coffea canephora HOM05D002191 ORTHO05D002292 4.8e-06 54.7 49 65.3
MSTRG.22258 Avicennia marina HOM05D002191 ORTHO05D002292 6.3e-06 54.3 49 65.3
Carub.0001s3564 Capsella rubella HOM05D002191 ORTHO05D002292 6.3e-06 54.3 48 62.5
HanXRQChr16g0508151 Helianthus annuus HOM05D002191 ORTHO05D002292 6.3e-06 54.3 75 49.3
Lalb_Chr22g0355071 Lupinus albus HOM05D002191 ORTHO05D002292 6.3e-06 54.3 48 68.8
Rhsim06G0051000 Rhododendron simsii HOM05D002191 ORTHO05D002292 6.3e-06 54.3 78 48.7
Aa31sc633G10 Aethionema arabicum HOM05D002191 ORTHO05D002292 8.2e-06 53.9 64 54.7
ClCG05G019940 Citrullus lanatus HOM05D002191 ORTHO05D002292 8.2e-06 53.9 48 60.4
PSO170G4868 Papaver somniferum HOM05D002191 ORTHO05D002292 8.2e-06 53.9 77 46.8
RcHm_v2.0_Chr6g0308061 Rosa chinensis HOM05D002191 ORTHO05D002292 8.2e-06 53.9 48 62.5


User provided reference genes

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