Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 3.5e-65 251.5 132 100.0
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 3.4e-44 181.8 129 72.1
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 4.9e-43 177.9 131 71.0
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 6.5e-43 177.6 125 72.8
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 1.1e-42 176.8 129 72.1
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 3.2e-42 175.3 129 71.3
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 3.2e-42 175.3 128 71.1
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 8.7e-40 167.2 127 69.3
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 3.3e-39 165.2 127 70.1
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 2.8e-38 162.2 131 69.5
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 3.7e-38 161.8 131 65.6
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 6.3e-38 161.0 131 64.9
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 1.1e-37 160.2 132 70.5
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 1.1e-37 160.2 109 77.1
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 1.1e-37 160.2 115 75.7
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 1.4e-37 159.8 130 67.7
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 5.3e-37 157.9 132 68.9
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 9.0e-37 157.1 129 68.2
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 1.2e-36 156.8 125 66.4
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 2.0e-36 156.0 129 64.3
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 4.5e-36 154.8 120 68.3
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 4.5e-36 154.8 115 69.6
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 5.9e-36 154.5 125 65.6
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 7.6e-36 154.1 132 62.9
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 7.6e-36 154.1 132 61.4
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 1.0e-35 153.7 117 69.2
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 1.3e-35 153.3 117 65.8
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 1.7e-35 152.9 103 79.6
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 1.7e-35 152.9 103 78.6
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 2.2e-35 152.5 103 79.6
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 2.9e-35 152.1 118 70.3
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 3.8e-35 151.8 130 62.3
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 6.5e-35 151.0 120 67.5
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 1.9e-34 149.4 126 65.1
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 1.9e-34 149.4 134 65.7
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 1.9e-34 149.4 103 77.7
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 2.5e-34 149.1 131 60.3
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 3.2e-34 148.7 118 68.6
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 4.2e-34 148.3 131 59.5
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 7.2e-34 147.5 116 71.6
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 7.2e-34 147.5 130 60.8
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 7.2e-34 147.5 115 67.0
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 7.2e-34 147.5 131 61.8
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 1.6e-33 146.4 118 67.8
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 2.1e-33 146.0 115 67.8
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 2.1e-33 146.0 130 61.5
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 2.7e-33 145.6 115 67.0
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 2.7e-33 145.6 103 74.8
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 2.7e-33 145.6 129 62.8
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 3.6e-33 145.2 124 65.3
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 4.6e-33 144.8 116 70.7
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 4.6e-33 144.8 111 67.6
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 7.9e-33 144.1 131 62.6
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 7.9e-33 144.1 116 67.2
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 1.3e-32 143.3 122 63.1
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.8e-32 142.9 107 72.0
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 1.8e-32 142.9 119 68.1
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 2.3e-32 142.5 96 77.1
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 2.3e-32 142.5 105 71.4
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 6.7e-32 141.0 101 74.3
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 1.1e-31 140.2 132 62.1
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 1.5e-31 139.8 119 64.7
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 1.9e-31 139.4 124 64.5
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 4.3e-31 138.3 117 65.8
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 4.3e-31 138.3 133 55.6
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 5.7e-31 137.9 114 65.8
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 7.4e-31 137.5 107 68.2
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 1.3e-30 136.7 136 58.8
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 2.2e-30 136.0 128 60.2
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 2.2e-30 136.0 107 68.2
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 2.8e-30 135.6 105 61.9
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 4.8e-30 134.8 132 58.3
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 6.3e-30 134.4 133 55.6
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 1.8e-29 132.9 105 66.7
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 1.8e-29 132.9 112 65.2
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 2.4e-29 132.5 123 61.8
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 3.1e-29 132.1 95 69.5
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 5.3e-29 131.3 94 73.4
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 5.3e-29 131.3 98 67.3
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 9.1e-29 130.6 130 56.2
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 9.1e-29 130.6 107 68.2
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 1.2e-28 130.2 134 56.7
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 1.2e-28 130.2 89 74.2
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 2.0e-28 129.4 141 53.9
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 2.6e-28 129.0 125 60.0
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 2.6e-28 129.0 112 65.2
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 3.4e-28 128.6 110 64.5
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 4.5e-28 128.3 105 63.8
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 5.9e-28 127.9 82 79.3
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 1.0e-27 127.1 108 65.7
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 1.3e-27 126.7 82 75.6
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 2.2e-27 125.9 108 64.8
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 2.2e-27 125.9 108 64.8
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.2e-27 125.9 121 55.4
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 2.9e-27 125.6 108 64.8
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 2.9e-27 125.6 108 64.8
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 6.5e-27 124.4 107 63.6
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.5e-26 122.5 121 53.7
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 5.5e-26 121.3 110 60.0
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 4.4e-23 111.7 101 55.4
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 9.7e-23 110.5 86 62.8
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 1.7e-22 109.8 92 66.3
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 2.8e-22 109.0 119 52.1
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.7e-22 108.6 89 64.0
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 1.8e-21 106.3 121 48.8
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 6.9e-21 104.4 90 57.8
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 1.2e-20 103.6 82 68.3
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 3.6e-17 92.0 97 51.5
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.8e-16 89.7 98 50.0
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 2.0e-15 86.3 107 49.5
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 8.2e-14 80.9 96 46.9
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 8.2e-14 80.9 79 50.6
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 1.1e-13 80.5 84 46.4
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 1.8e-13 79.7 55 76.4
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 5.0e-11 71.6 92 50.0
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 1.5e-07 60.1 62 54.8
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.5e-07 60.1 63 54.0


User provided reference genes

Program Settings